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jalviewX

  1. Project Clover database Wed Oct 31 2018 15:13:58 GMT
  2. Package jalview.datamodel

File Profiles.java

 

Coverage histogram

../../img/srcFileCovDistChart9.png
12% of files have more coverage

Code metrics

4
4
4
1
64
26
8
2
1
4
2

Classes

Class Line # Actions
Profiles 23 4 8 2
0.833333383.3%
 

Contributing tests

This file is covered by 86 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package jalview.datamodel;
22   
 
23    public class Profiles implements ProfilesI
24    {
25   
26    private ProfileI[] profiles;
27   
 
28  938 toggle public Profiles(ProfileI[] p)
29    {
30  938 profiles = p;
31    }
32   
33    /**
34    * Returns the profile for the given column, or null if none found
35    *
36    * @param col
37    */
 
38  490514 toggle @Override
39    public ProfileI get(int col)
40    {
41  490536 return profiles != null && col >= 0 && col < profiles.length
42    ? profiles[col]
43    : null;
44    }
45   
46    /**
47    * Returns the first column (base 0) covered by the profiles
48    */
 
49  964 toggle @Override
50    public int getStartColumn()
51    {
52  964 return 0;
53    }
54   
55    /**
56    * Returns the last column (base 0) covered by the profiles
57    */
 
58  964 toggle @Override
59    public int getEndColumn()
60    {
61  964 return profiles == null ? 0 : profiles.length - 1;
62    }
63   
64    }
  • Report generated by OpenClover v 4.2.1 on Wed Oct 31 2018 15:15:54 GMT using coverage data from Wed Oct 31 2018 15:15:47 GMT.
  • Clover free edition.