|
jalview.renderer.ScaleRenderer.ScaleMark
jalview.renderer.ScaleRenderer.ScaleMark
|
1.0100%
|
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jalview.ws.WSClient
jalview.ws.WSClient
|
1.0100%
|
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|
jalview.datamodel.ResidueCount.SymbolCounts
jalview.datamodel.ResidueCount.SymbolCounts
|
1.0100%
|
|
|
jalview.schemes.TurnColourScheme
jalview.schemes.TurnColourScheme
|
1.0100%
|
|
|
jalview.schemes.StrandColourScheme
jalview.schemes.StrandColourScheme
|
1.0100%
|
|
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jalview.schemes.HelixColourScheme
jalview.schemes.HelixColourScheme
|
1.0100%
|
|
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jalview.schemes.BuriedColourScheme
jalview.schemes.BuriedColourScheme
|
1.0100%
|
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jalview.util.QuickSort.IntComparator
jalview.util.QuickSort.IntComparator
|
0.8571428785.7%
|
|
|
jalview.schemes.ZappoColourScheme
jalview.schemes.ZappoColourScheme
|
0.7575%
|
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|
jalview.schemes.ScoreColourScheme
jalview.schemes.ScoreColourScheme
|
0.7575%
|
|
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jalview.ws.SequenceFetcher
jalview.ws.SequenceFetcher
|
0.7435897674.4%
|
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jalview.schemes.ResidueColourScheme
jalview.schemes.ResidueColourScheme
|
0.738095273.8%
|
|
|
jalview.jbgui.GSliderPanel
jalview.jbgui.GSliderPanel
|
0.7323943473.2%
|
|
|
jalview.gui.SliderPanel
jalview.gui.SliderPanel
|
0.715789571.6%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.6774193667.7%
|
|
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jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.6608695466.1%
|
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jalview.renderer.ScaleRenderer
jalview.renderer.ScaleRenderer
|
0.5656%
|
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jalview.util.MessageManager
jalview.util.MessageManager
|
0.550%
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|
|
jalview.schemes.TaylorColourScheme
jalview.schemes.TaylorColourScheme
|
0.550%
|
|
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jalview.schemes.PurinePyrimidineColourScheme
jalview.schemes.PurinePyrimidineColourScheme
|
0.550%
|
|
|
jalview.schemes.NucleotideColourScheme
jalview.schemes.NucleotideColourScheme
|
0.550%
|
|
|
jalview.gui.SplashScreen.SplashImage
jalview.gui.SplashScreen.SplashImage
|
0.4705882447.1%
|
|
|
jalview.gui.SequenceRenderer
jalview.gui.SequenceRenderer
|
0.467980346.8%
|
|
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jalview.ws.jws2.MsaWSClient
jalview.ws.jws2.MsaWSClient
|
0.448979644.9%
|
|
|
jalview.ext.ensembl.EnsemblGenomes
jalview.ext.ensembl.EnsemblGenomes
|
0.4444444544.4%
|
|
|
jalview.renderer.ResidueColourFinder
jalview.renderer.ResidueColourFinder
|
0.4285714342.9%
|
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jalview.datamodel.Profiles
jalview.datamodel.Profiles
|
0.4166666641.7%
|
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jalview.gui.ColourMenuHelper
jalview.gui.ColourMenuHelper
|
0.4152542441.5%
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jalview.schemes.HydrophobicColourScheme
jalview.schemes.HydrophobicColourScheme
|
0.440%
|
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jalview.gui.IdCanvas
jalview.gui.IdCanvas
|
0.395604439.6%
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jalview.renderer.AnnotationRenderer
jalview.renderer.AnnotationRenderer
|
0.3881511738.8%
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jalview.ws.rest.RestServiceDescription
jalview.ws.rest.RestServiceDescription
|
0.31531.5%
|
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jalview.gui.PopupMenu
jalview.gui.PopupMenu
|
0.300429230%
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jalview.ws.jws2.SequenceAnnotationWSClient
jalview.ws.jws2.SequenceAnnotationWSClient
|
0.2903225729%
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jalview.ws.dbsources.RfamSeed
jalview.ws.dbsources.RfamSeed
|
0.285714328.6%
|
|
|
jalview.schemes.JalviewColourScheme
jalview.schemes.JalviewColourScheme
|
0.285714328.6%
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jalview.ws.jws2.JabaPreset
jalview.ws.jws2.JabaPreset
|
0.2727272827.3%
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jalview.datamodel.ResidueCount
jalview.datamodel.ResidueCount
|
0.2707581227.1%
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jalview.viewmodel.ViewportRanges
jalview.viewmodel.ViewportRanges
|
0.2706270527.1%
|
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jalview.util.QuickSort
jalview.util.QuickSort
|
0.2653721626.5%
|
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jalview.analysis.Conservation
jalview.analysis.Conservation
|
0.2586206825.9%
|
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jalview.ws.jws2.jabaws2.Jws2Instance
jalview.ws.jws2.jabaws2.Jws2Instance
|
0.2525%
|
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jalview.ws.uimodel.AlignAnalysisUIText
jalview.ws.uimodel.AlignAnalysisUIText
|
0.2439024424.4%
|
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jalview.ws.rest.params.Alignment
jalview.ws.rest.params.Alignment
|
0.2435897424.4%
|
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jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.2401215724%
|
|
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jalview.io.FileFormats
jalview.io.FileFormats
|
0.2424%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.2322834623.2%
|
|
|
jalview.ext.ensembl.EnsemblSequenceFetcher
jalview.ext.ensembl.EnsemblSequenceFetcher
|
0.2307692323.1%
|
|
|
jalview.ws.jws2.Jws2Client
jalview.ws.jws2.Jws2Client
|
0.2202380922%
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jalview.analysis.AlignmentAnnotationUtils
jalview.analysis.AlignmentAnnotationUtils
|
0.2197802222%
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jalview.schemes.ColourSchemes
jalview.schemes.ColourSchemes
|
0.2127659621.3%
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jalview.gui.JvSwingUtils
jalview.gui.JvSwingUtils
|
0.2108843521.1%
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jalview.gui.AppJmol.RenderPanel
jalview.gui.AppJmol.RenderPanel
|
0.2058823620.6%
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jalview.ws.rest.InputType
jalview.ws.rest.InputType
|
0.2056074720.6%
|
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jalview.gui.ScalePanel
jalview.gui.ScalePanel
|
0.1960784319.6%
|
|
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jalview.gui.TreeCanvas
jalview.gui.TreeCanvas
|
0.1956521719.6%
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jalview.gui.PaintRefresher
jalview.gui.PaintRefresher
|
0.190839719.1%
|
|
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jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.1891659518.9%
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|
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jalview.ws.dbsources.EmblSource
jalview.ws.dbsources.EmblSource
|
0.1818181918.2%
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jalview.datamodel.SequenceGroup
jalview.datamodel.SequenceGroup
|
0.1818181918.2%
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|
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jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.1818181918.2%
|
|
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jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.1719342617.2%
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jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.1707317117.1%
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jalview.ws.jws1.WS1Client
jalview.ws.jws1.WS1Client
|
0.1616%
|
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jalview.gui.SeqCanvas
jalview.gui.SeqCanvas
|
0.1577868915.8%
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jalview.gui.Desktop.MyDesktopManager
jalview.gui.Desktop.MyDesktopManager
|
0.1555555615.6%
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jalview.ws.dbsources.EmblCdsSource
jalview.ws.dbsources.EmblCdsSource
|
0.1538461615.4%
|
|
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jalview.schemes.TCoffeeColourScheme
jalview.schemes.TCoffeeColourScheme
|
0.1475409914.8%
|
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jalview.util.StringUtils
jalview.util.StringUtils
|
0.1403508814%
|
|
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jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.12512.5%
|
|
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jalview.ws.rest.params.SeqGroupIndexVector
jalview.ws.rest.params.SeqGroupIndexVector
|
0.12408759412.4%
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|
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jalview.gui.Console
jalview.gui.Console
|
0.1234177212.3%
|
|
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jalview.gui.AnnotationLabels
jalview.gui.AnnotationLabels
|
0.1206030212.1%
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jalview.schemes.Blosum62ColourScheme
jalview.schemes.Blosum62ColourScheme
|
0.1176470611.8%
|
|
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jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.1161290311.6%
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jalview.ws.rest.RestClient
jalview.ws.rest.RestClient
|
0.11538461611.5%
|
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jalview.gui.IdwidthAdjuster
jalview.gui.IdwidthAdjuster
|
0.1136363711.4%
|
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jalview.datamodel.BinaryNode
jalview.datamodel.BinaryNode
|
0.1066666710.7%
|
|
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jalview.ws.rest.params.AnnotationFile
jalview.ws.rest.params.AnnotationFile
|
0.10256410410.3%
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jalview.util.ColorUtils
jalview.util.ColorUtils
|
0.1005586610.1%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.090909099.1%
|
|
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jalview.schemes.RNAHelicesColour
jalview.schemes.RNAHelicesColour
|
0.082191788.2%
|
|
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jalview.ws.dbsources.Xfam
jalview.ws.dbsources.Xfam
|
0.076923087.7%
|
|
|
jalview.gui.AppJmolBinding
jalview.gui.AppJmolBinding
|
0.0735294157.4%
|
|
|
jalview.gui.Desktop.MyDesktopPane
jalview.gui.Desktop.MyDesktopPane
|
0.073170737.3%
|
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jalview.io.FileFormat
jalview.io.FileFormat
|
0.068376076.8%
|
|
|
jalview.schemes.PIDColourScheme
jalview.schemes.PIDColourScheme
|
0.066666676.7%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.066369896.6%
|
|
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ext.vamsas.ServiceHandle
ext.vamsas.ServiceHandle
|
0.061224496.1%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.058823535.9%
|
|
|
jalview.ws.seqfetcher.ASequenceFetcher
jalview.ws.seqfetcher.ASequenceFetcher
|
0.0577777775.8%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.054794525.5%
|
|
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jalview.ws.seqfetcher.DbSourceProxyImpl
jalview.ws.seqfetcher.DbSourceProxyImpl
|
0.0540540555.4%
|
|
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jalview.ws.jws1.Discoverer
jalview.ws.jws1.Discoverer
|
0.0512820525.1%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.0508474565.1%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.047047974.7%
|
|
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jalview.ws.dbsources.Pdb
jalview.ws.dbsources.Pdb
|
0.042553194.3%
|
|
|
jalview.ws.jws2.JabaParamStore
jalview.ws.jws2.JabaParamStore
|
0.0416666684.2%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.037313433.7%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.0353773573.5%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.0325814523.3%
|
|
|
jalview.ws.jws1.JPredClient
jalview.ws.jws1.JPredClient
|
0.0310559013.1%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0298273153%
|
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jalview.ws.dbsources.Uniprot
jalview.ws.dbsources.Uniprot
|
0.0289855082.9%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0278637762.8%
|
|
|
jalview.util.DBRefUtils
jalview.util.DBRefUtils
|
0.0254545452.5%
|
|
|
jalview.schemes.ClustalxColourScheme
jalview.schemes.ClustalxColourScheme
|
0.0215053762.2%
|
|
|
jalview.datamodel.SearchResults
jalview.datamodel.SearchResults
|
0.020202022%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.0187919461.9%
|
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jalview.datamodel.ColumnSelection.IntList
jalview.datamodel.ColumnSelection.IntList
|
0.0186915881.9%
|
|
|
jalview.analysis.TreeModel
jalview.analysis.TreeModel
|
0.0159362551.6%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.01251.3%
|
|
|
jalview.gui.SequenceFetcher
jalview.gui.SequenceFetcher
|
0.0117416831.2%
|
|
|
jalview.structures.models.AAStructureBindingModel
jalview.structures.models.AAStructureBindingModel
|
0.0113636371.1%
|
|
|
jalview.gui.IdPanel
jalview.gui.IdPanel
|
0.0100502511%
|
|
|
jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
|
0.0082644620.8%
|
|
|
jalview.ext.ensembl.EnsemblGene
jalview.ext.ensembl.EnsemblGene
|
0.0081632650.8%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.0080822920.8%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.0068493150.7%
|
|
|
jalview.gui.StructureViewerBase
jalview.gui.StructureViewerBase
|
0.0044543430.4%
|
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