|
jalview.ws.WSClient
jalview.ws.WSClient
|
1.0100%
|
|
|
jalview.datamodel.Profiles
jalview.datamodel.Profiles
|
0.833333383.3%
|
|
|
jalview.ws.SequenceFetcher
jalview.ws.SequenceFetcher
|
0.7435897674.4%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.6774193667.7%
|
|
|
jalview.gui.AnnotationChooser
jalview.gui.AnnotationChooser
|
0.4669603446.7%
|
|
|
jalview.ws.jws2.MsaWSClient
jalview.ws.jws2.MsaWSClient
|
0.448979644.9%
|
|
|
jalview.ext.ensembl.EnsemblGenomes
jalview.ext.ensembl.EnsemblGenomes
|
0.4444444544.4%
|
|
|
jalview.workers.ConsensusThread
jalview.workers.ConsensusThread
|
0.37113437.1%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.3214285732.1%
|
|
|
jalview.ws.rest.RestServiceDescription
jalview.ws.rest.RestServiceDescription
|
0.31531.5%
|
|
|
jalview.ws.jws2.SequenceAnnotationWSClient
jalview.ws.jws2.SequenceAnnotationWSClient
|
0.2903225729%
|
|
|
jalview.ws.dbsources.RfamSeed
jalview.ws.dbsources.RfamSeed
|
0.285714328.6%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.2826747628.3%
|
|
|
jalview.ws.jws2.JabaPreset
jalview.ws.jws2.JabaPreset
|
0.2727272827.3%
|
|
|
jalview.datamodel.ResidueCount
jalview.datamodel.ResidueCount
|
0.2527075725.3%
|
|
|
jalview.ws.jws2.jabaws2.Jws2Instance
jalview.ws.jws2.jabaws2.Jws2Instance
|
0.2525%
|
|
|
jalview.gui.JvSwingUtils
jalview.gui.JvSwingUtils
|
0.2448979624.5%
|
|
|
jalview.ws.uimodel.AlignAnalysisUIText
jalview.ws.uimodel.AlignAnalysisUIText
|
0.2439024424.4%
|
|
|
jalview.ws.rest.params.Alignment
jalview.ws.rest.params.Alignment
|
0.2435897424.4%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.2322834623.2%
|
|
|
jalview.ext.ensembl.EnsemblSequenceFetcher
jalview.ext.ensembl.EnsemblSequenceFetcher
|
0.2307692323.1%
|
|
|
jalview.ws.jws2.Jws2Client
jalview.ws.jws2.Jws2Client
|
0.2202380922%
|
|
|
jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.2139037421.4%
|
|
|
jalview.ws.rest.InputType
jalview.ws.rest.InputType
|
0.2056074720.6%
|
|
|
jalview.ws.dbsources.EmblSource
jalview.ws.dbsources.EmblSource
|
0.1818181918.2%
|
|
|
jalview.ws.jws1.WS1Client
jalview.ws.jws1.WS1Client
|
0.1616%
|
|
|
jalview.ws.dbsources.EmblCdsSource
jalview.ws.dbsources.EmblCdsSource
|
0.1538461615.4%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.1403508814%
|
|
|
jalview.ws.rest.params.SeqGroupIndexVector
jalview.ws.rest.params.SeqGroupIndexVector
|
0.12408759412.4%
|
|
|
jalview.ws.rest.RestClient
jalview.ws.rest.RestClient
|
0.11538461611.5%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.11428571511.4%
|
|
|
jalview.gui.Desktop.MyDesktopManager
jalview.gui.Desktop.MyDesktopManager
|
0.1111111111.1%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.1096774211%
|
|
|
jalview.util.QuickSort
jalview.util.QuickSort
|
0.10679611610.7%
|
|
|
jalview.ws.rest.params.AnnotationFile
jalview.ws.rest.params.AnnotationFile
|
0.10256410410.3%
|
|
|
jalview.util.ColorUtils
jalview.util.ColorUtils
|
0.1005586610.1%
|
|
|
jalview.io.FileFormats
jalview.io.FileFormats
|
0.088%
|
|
|
jalview.ws.dbsources.Xfam
jalview.ws.dbsources.Xfam
|
0.076923087.7%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.0734463267.3%
|
|
|
ext.vamsas.ServiceHandle
ext.vamsas.ServiceHandle
|
0.061224496.1%
|
|
|
jalview.ws.seqfetcher.ASequenceFetcher
jalview.ws.seqfetcher.ASequenceFetcher
|
0.0577777775.8%
|
|
|
jalview.ws.seqfetcher.DbSourceProxyImpl
jalview.ws.seqfetcher.DbSourceProxyImpl
|
0.0540540555.4%
|
|
|
jalview.ws.jws1.Discoverer
jalview.ws.jws1.Discoverer
|
0.0512820525.1%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.0485633354.9%
|
|
|
jalview.ws.dbsources.Pdb
jalview.ws.dbsources.Pdb
|
0.042553194.3%
|
|
|
jalview.ws.jws2.JabaParamStore
jalview.ws.jws2.JabaParamStore
|
0.0416666684.2%
|
|
|
jalview.datamodel.SequenceGroup
jalview.datamodel.SequenceGroup
|
0.037735853.8%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.034599733.5%
|
|
|
jalview.io.FileFormat
jalview.io.FileFormat
|
0.0341880363.4%
|
|
|
jalview.ws.jws1.JPredClient
jalview.ws.jws1.JPredClient
|
0.0310559013.1%
|
|
|
jalview.ws.dbsources.Uniprot
jalview.ws.dbsources.Uniprot
|
0.0289855082.9%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.0283748922.8%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0278637762.8%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.0260869562.6%
|
|
|
jalview.util.DBRefUtils
jalview.util.DBRefUtils
|
0.0254545452.5%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.025117742.5%
|
|
|
jalview.util.Format
jalview.util.Format
|
0.0227743282.3%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.0176991151.8%
|
|
|
jalview.gui.SequenceFetcher
jalview.gui.SequenceFetcher
|
0.0117416831.2%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0109670991.1%
|
|
|
jalview.ext.ensembl.EnsemblGene
jalview.ext.ensembl.EnsemblGene
|
0.0081632650.8%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.0080822920.8%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.00553505540.6%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.00501253130.5%
|
|
