Class | Line # | Actions | ||||
---|---|---|---|---|---|---|
HiddenCursorPosition | 23 | 4 | 3 | 0 | 1.0100% |
Class HiddenCursorPosition |
Line # 23 |
4 |
3 |
0 |
1.0100% |
---|---|---|---|---|---|
HiddenCursorPosition(int,int) HiddenCursorPosition(int,int) | 3131 | 2.02 | 1.01 | 0.00 | 1.0 1.0100% |
getRegionIndex() : int getRegionIndex() : int | 3737 | 1.01 | 1.01 | 0.00 | 1.0 1.0100% |
getHiddenSoFar() : int getHiddenSoFar() : int | 4242 | 1.01 | 1.01 | 0.00 | 1.0 1.0100% |
1.0
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsInMiddlejalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsInMiddle | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testHasManyHiddenColumnsjalview.datamodel.HiddenColumnsTest.testHasManyHiddenColumns | 1PASS | ||
1.0
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testDraggingjalview.viewmodel.OverviewDimensionsShowHiddenTest.testDragging | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testIteratorjalview.datamodel.HiddenColumnsTest.testIterator | 1PASS | ||
1.0
|
jalview.datamodel.SequenceTest.testLocateVisibleStartofSequencejalview.datamodel.SequenceTest.testLocateVisibleStartofSequence | 1PASS | ||
1.0
|
jalview.datamodel.AlignmentViewTest.testGetVisibleContigsjalview.datamodel.AlignmentViewTest.testGetVisibleContigs | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testBoundedStartIteratorjalview.datamodel.HiddenColumnsTest.testBoundedStartIterator | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testGetNextHiddenBoundary_Leftjalview.datamodel.HiddenColumnsTest.testGetNextHiddenBoundary_Left | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsCursorTest.testFindRegionForColumn_Visiblejalview.datamodel.HiddenColumnsCursorTest.testFindRegionForColumn_Visible | 1PASS | ||
1.0
|
jalview.io.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettingsjalview.io.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettings | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testAdjustForHiddenColumnsjalview.datamodel.HiddenColumnsTest.testAdjustForHiddenColumns | 1PASS | ||
1.0
|
jalview.datamodel.StartRegionIteratorTest.testBoundsIteratorUsingCursorjalview.datamodel.StartRegionIteratorTest.testBoundsIteratorUsingCursor | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testRevealHiddenColumnsjalview.datamodel.HiddenColumnsTest.testRevealHiddenColumns | 1PASS | ||
1.0
|
jalview.io.Jalview2xmlTests.testStoreAndRecoverGroupRepSeqsjalview.io.Jalview2xmlTests.testStoreAndRecoverGroupRepSeqs | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testGetVisibleStartAndEndIndexjalview.datamodel.HiddenColumnsTest.testGetVisibleStartAndEndIndex | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testHideInsertionsForjalview.datamodel.HiddenColumnsTest.testHideInsertionsFor | 1PASS | ||
1.0
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsInMiddlejalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsInMiddle | 1PASS | ||
1.0
|
jalview.ext.rbvi.chimera.ChimeraCommandsTest.testGetColourBySequenceCommands_hiddenColumnsjalview.ext.rbvi.chimera.ChimeraCommandsTest.testGetColourBySequenceCommands_hiddenColumns | 1PASS | ||
1.0
|
jalview.io.JSONFileTest.testBioJSONRoundTripWithColourSchemeNonejalview.io.JSONFileTest.testBioJSONRoundTripWithColourSchemeNone | 1PASS | ||
1.0
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumns | 1PASS | ||
1.0
|
jalview.io.Jalview2xmlTests.testStoreAndRecoverExpandedviewsjalview.io.Jalview2xmlTests.testStoreAndRecoverExpandedviews | 1PASS | ||
1.0
|
jalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumnsjalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumns | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testEqualsjalview.datamodel.HiddenColumnsTest.testEquals | 1PASS | ||
1.0
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testPositionInBoxjalview.viewmodel.OverviewDimensionsShowHiddenTest.testPositionInBox | 1PASS | ||
1.0
|
jalview.io.Jalview2xmlTests.gatherViewsHerejalview.io.Jalview2xmlTests.gatherViewsHere | 1PASS | ||
1.0
|
jalview.analysis.AnnotationSorterTest.testSort_timingSemisortedjalview.analysis.AnnotationSorterTest.testSort_timingSemisorted | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testVisibleContigsIteratorjalview.datamodel.HiddenColumnsTest.testVisibleContigsIterator | 1PASS | ||
1.0
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsAtEndjalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsAtEnd | 1PASS | ||
1.0
|
jalview.io.Jalview2xmlTests.viewRefPdbAnnotationjalview.io.Jalview2xmlTests.viewRefPdbAnnotation | 1PASS | ||
1.0
|
jalview.datamodel.ColumnSelectionTest.testSetElementsFromjalview.datamodel.ColumnSelectionTest.testSetElementsFrom | 1PASS | ||
1.0
|
jalview.viewmodel.ViewportRangesTest.testSetViewportLocationjalview.viewmodel.ViewportRangesTest.testSetViewportLocation | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testRevealAllHiddenColumnsjalview.datamodel.HiddenColumnsTest.testRevealAllHiddenColumns | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testBoundedIteratorjalview.datamodel.HiddenColumnsTest.testBoundedIterator | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testGetNextHiddenBoundary_Rightjalview.datamodel.HiddenColumnsTest.testGetNextHiddenBoundary_Right | 1PASS | ||
1.0
|
jalview.io.AnnotationFileIOTest.exampleAnnotationFileIOjalview.io.AnnotationFileIOTest.exampleAnnotationFileIO | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testHideColumns_BitSet_rangejalview.datamodel.HiddenColumnsTest.testHideColumns_BitSet_range | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testHashCodejalview.datamodel.HiddenColumnsTest.testHashCode | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testCopyConstructor2jalview.datamodel.HiddenColumnsTest.testCopyConstructor2 | 1PASS | ||
1.0
|
jalview.gui.AlignmentPanelTest.TestSetScrollValuesjalview.gui.AlignmentPanelTest.TestSetScrollValues | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testRegionsToStringjalview.datamodel.HiddenColumnsTest.testRegionsToString | 1PASS | ||
1.0
|
jalview.viewmodel.ViewportRangesTest.testScrollToVisiblejalview.viewmodel.ViewportRangesTest.testScrollToVisible | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testHideColumns_subsumingHiddenjalview.datamodel.HiddenColumnsTest.testHideColumns_subsumingHidden | 1PASS | ||
1.0
|
jalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumnsjalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumns | 1PASS | ||
1.0
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsAtStartjalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsAtStart | 1PASS | ||
1.0
|
jalview.datamodel.AlignmentAnnotationTests.testMakeVisibleAnnotationjalview.datamodel.AlignmentAnnotationTests.testMakeVisibleAnnotation | 1PASS | ||
1.0
|
jalview.io.Jalview2xmlTests.testCopyViewSettingsjalview.io.Jalview2xmlTests.testCopyViewSettings | 1PASS | ||
1.0
|
jalview.gui.PopupMenuTest.testHideInsertionsjalview.gui.PopupMenuTest.testHideInsertions | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testOffsetByVisibleColumnsjalview.datamodel.HiddenColumnsTest.testOffsetByVisibleColumns | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsCursorTest.testConstructorjalview.datamodel.HiddenColumnsCursorTest.testConstructor | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testCopyConstructorjalview.datamodel.HiddenColumnsTest.testCopyConstructor | 1PASS | ||
1.0
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_HiddenColumnsjalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_HiddenColumns | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testFindColumnPositionjalview.datamodel.HiddenColumnsTest.testFindColumnPosition | 1PASS | ||
1.0
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsAtEndjalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsAtEnd | 1PASS | ||
1.0
|
jalview.gui.AnnotationColumnChooserTest.testResetjalview.gui.AnnotationColumnChooserTest.testReset | 1PASS | ||
1.0
|
jalview.datamodel.CigarArrayTest.testConstructorjalview.datamodel.CigarArrayTest.testConstructor | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testIsVisiblejalview.datamodel.HiddenColumnsTest.testIsVisible | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testGetSizejalview.datamodel.HiddenColumnsTest.testGetSize | 1PASS | ||
1.0
|
jalview.analysis.DnaTest.testTranslateCdna_hiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_hiddenColumns | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testHideColumnsjalview.datamodel.HiddenColumnsTest.testHideColumns | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testGetRegionWithEdgeAtResjalview.datamodel.HiddenColumnsTest.testGetRegionWithEdgeAtRes | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsCursorTest.testFindRegionForColumnjalview.datamodel.HiddenColumnsCursorTest.testFindRegionForColumn | 1PASS | ||
1.0
|
jalview.gui.AlignFrameTest.testHideFeatureColumnsjalview.gui.AlignFrameTest.testHideFeatureColumns | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testHideColumns_BitSetjalview.datamodel.HiddenColumnsTest.testHideColumns_BitSet | 1PASS | ||
1.0
|
jalview.datamodel.ColumnSelectionTest.testInvertColumnSelectionjalview.datamodel.ColumnSelectionTest.testInvertColumnSelection | 1PASS | ||
1.0
|
jalview.datamodel.HiddenColumnsTest.testVisibleBlocksVisBoundsIteratorjalview.datamodel.HiddenColumnsTest.testVisibleBlocksVisBoundsIterator | 1PASS | ||
1.0
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsAtStartjalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsAtStart | 1PASS | ||
1.0
|
jalview.io.Jalview2xmlTests.noDuplicatePdbMappingsMadejalview.io.Jalview2xmlTests.noDuplicatePdbMappingsMade | 1PASS | ||
1.0
|
jalview.datamodel.ColumnSelectionTest.testHideSelectedColumnsjalview.datamodel.ColumnSelectionTest.testHideSelectedColumns | 1PASS | ||
1.0
|
jalview.renderer.ScaleRendererTest.testCalculateMarksjalview.renderer.ScaleRendererTest.testCalculateMarks | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testHideRevealSequencesjalview.gui.AlignViewportTest.testHideRevealSequences | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testCopyConstructorjalview.datamodel.AlignmentTest.testCopyConstructor | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testDeleteHiddenSequencejalview.datamodel.AlignmentTest.testDeleteHiddenSequence | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testAlignAs_alternateTranscriptsUngappedjalview.analysis.AlignmentUtilsTests.testAlignAs_alternateTranscriptsUngapped | 1PASS | ||
0.42857143
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodons | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testCreateDatasetAlignmentjalview.datamodel.AlignmentTest.testCreateDatasetAlignment | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testConstructorjalview.viewmodel.OverviewDimensionsShowHiddenTest.testConstructor | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testDeleteSequenceByIndexjalview.datamodel.AlignmentTest.testDeleteSequenceByIndex | 1PASS | ||
0.42857143
|
jalview.schemes.ResidueColourSchemeTest.testIsApplicableTojalview.schemes.ResidueColourSchemeTest.testIsApplicableTo | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testSetSelectionGroupjalview.gui.AlignViewportTest.testSetSelectionGroup | 1PASS | ||
0.42857143
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_userdefjalview.renderer.ResidueColourFinderTest.testGetResidueColour_userdef | 1PASS | ||
0.42857143
|
jalview.analysis.CrossRefTest.testFindXrefSequences_fromDbRefMapjalview.analysis.CrossRefTest.testFindXrefSequences_fromDbRefMap | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testAlignProteinAsDna_incompleteStartCodonjalview.analysis.AlignmentUtilsTests.testAlignProteinAsDna_incompleteStartCodon | 1PASS | ||
0.42857143
|
jalview.renderer.seqfeatures.FeatureRendererTest.testGetColourjalview.renderer.seqfeatures.FeatureRendererTest.testGetColour | 1PASS | ||
0.42857143
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_nonejalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_none | 1PASS | ||
0.42857143
|
jalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlightjalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlight | 1PASS | ||
0.42857143
|
jalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMol | 1PASS | ||
0.42857143
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_regionjalview.util.MappingUtilsTest.testMapSequenceGroup_region | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_prioritiseXrefsjalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_prioritiseXrefs | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances_withParamsjalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances_withParams | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testCreateDataset_updateDbrefMappingsjalview.datamodel.AlignmentTest.testCreateDataset_updateDbrefMappings | 1PASS | ||
0.42857143
|
jalview.schemes.ColourSchemePropertyTest.testGetColourSchemejalview.schemes.ColourSchemePropertyTest.testGetColourScheme | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentAnnotationTests.testLiftOverjalview.datamodel.AlignmentAnnotationTests.testLiftOver | 1PASS | ||
0.42857143
|
jalview.schemes.PIDColourSchemeTest.testFindColour_ignoreGapsjalview.schemes.PIDColourSchemeTest.testFindColour_ignoreGaps | 1PASS | ||
0.42857143
|
jalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_splicedjalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_spliced | 1PASS | ||
0.42857143
|
jalview.viewmodel.ViewportRangesTest.testPageUpDownWrappedjalview.viewmodel.ViewportRangesTest.testPageUpDownWrapped | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testDeregisterMapping_onCloseViewjalview.gui.AlignViewportTest.testDeregisterMapping_onCloseView | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withNoReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withNoReference | 1PASS | ||
0.42857143
|
jalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequence | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testShowOrHideSequenceAnnotationsjalview.analysis.AlignmentUtilsTests.testShowOrHideSequenceAnnotations | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsAtEndjalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsAtEnd | 1PASS | ||
0.42857143
|
jalview.schemes.ClustalxColourSchemeTest.testFindColourjalview.schemes.ClustalxColourSchemeTest.testFindColour | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.readGff3Filejalview.io.FeaturesFileTest.readGff3File | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testPropagateInsertionsOverlapjalview.datamodel.AlignmentTest.testPropagateInsertionsOverlap | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_reverseToForwardjalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_reverseToForward | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testPositionInBoxjalview.viewmodel.OverviewDimensionsHideHiddenTest.testPositionInBox | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsAtEndjalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsAtEnd | 1PASS | ||
0.42857143
|
jalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotationjalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotation | 1PASS | ||
0.42857143
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistancesjalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances | 1PASS | ||
0.42857143
|
jalview.analysis.CrossRefTest.testSearchDatasetjalview.analysis.CrossRefTest.testSearchDataset | 1PASS | ||
0.42857143
|
jalview.analysis.FinderTest.testFindAll_inDescriptionjalview.analysis.FinderTest.testFindAll_inDescription | 1PASS | ||
0.42857143
|
jalview.datamodel.ColumnSelectionTest.testHideColumns_withSelectionjalview.datamodel.ColumnSelectionTest.testHideColumns_withSelection | 1PASS | ||
0.42857143
|
jalview.datamodel.SeqCigarTest.testSomethingjalview.datamodel.SeqCigarTest.testSomething | 1PASS | ||
0.42857143
|
jalview.io.PfamFormatInputTest.testPfamFormatNoLimitsjalview.io.PfamFormatInputTest.testPfamFormatNoLimits | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testFindIndexNFromRowjalview.datamodel.HiddenSequencesTest.testFindIndexNFromRow | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsAtStartjalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsAtStart | 1PASS | ||
0.42857143
|
jalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequence | 1PASS | ||
0.42857143
|
jalview.datamodel.SequenceTest.testFindPosition_withCursorAndEditsjalview.datamodel.SequenceTest.testFindPosition_withCursorAndEdits | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testAddCodonFramejalview.datamodel.AlignmentTest.testAddCodonFrame | 1PASS | ||
0.42857143
|
jalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_withAnnotationsjalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_withAnnotations | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testGetSequencesByNamejalview.analysis.AlignmentUtilsTests.testGetSequencesByName | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.testParsejalview.io.FeaturesFileTest.testParse | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.simpleGff3FileClassjalview.io.FeaturesFileTest.simpleGff3FileClass | 1PASS | ||
0.42857143
|
jalview.analysis.CrossRefTest.testFindXrefSequences_withFetchjalview.analysis.CrossRefTest.testFindXrefSequences_withFetch | 3FAIL | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testMakeCdsAlignmentjalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment | 1PASS | ||
0.42857143
|
jalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_reverse_querygffjalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_reverse_querygff | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenColumnsTest.testGetVisibleColsIteratorjalview.datamodel.HiddenColumnsTest.testGetVisibleColsIterator | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_reverse_targetgffjalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_reverse_targetgff | 1PASS | ||
0.42857143
|
jalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToNucleotidejalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToNucleotide | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_fromScrolledjalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_fromScrolled | 3FAIL | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_noXrefsjalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_noXrefs | 1PASS | ||
0.42857143
|
jalview.io.JalviewExportPropertiesTests.testImportExportPeriodGapsjalview.io.JalviewExportPropertiesTests.testImportExportPeriodGaps | 1PASS | ||
0.42857143
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_nonejalview.renderer.ResidueColourFinderTest.testGetResidueColour_none | 1PASS | ||
0.42857143
|
jalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependentjalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependent | 1PASS | ||
0.42857143
|
jalview.io.StockholmFileTest.pfamFileDataExtractionjalview.io.StockholmFileTest.pfamFileDataExtraction | 1PASS | ||
0.42857143
|
mc_view.PDBfileTest.testParse_withAnnotations_noSSmc_view.PDBfileTest.testParse_withAnnotations_noSS | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.analysis.CrossRefTest.testFindXrefSequences_forGeneAndTranscriptsjalview.analysis.CrossRefTest.testFindXrefSequences_forGeneAndTranscripts | 3FAIL | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testAlignAsSameSequencesjalview.analysis.AlignmentUtilsTests.testAlignAsSameSequences | 1PASS | ||
0.42857143
|
jalview.commands.EditCommandTest.testCut_withFeatures_exhaustivejalview.commands.EditCommandTest.testCut_withFeatures_exhaustive | 1PASS | ||
0.42857143
|
jalview.datamodel.AllColsIteratorTest.testOneElementjalview.datamodel.AllColsIteratorTest.testOneElement | 1PASS | ||
0.42857143
|
jalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMol | 1PASS | ||
0.42857143
|
jalview.gui.SeqPanelTest.testSetStatusReturnsNearestResiduePositionjalview.gui.SeqPanelTest.testSetStatusReturnsNearestResiduePosition | 1PASS | ||
0.42857143
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_sequencesjalview.util.MappingUtilsTest.testMapSequenceGroup_sequences | 1PASS | ||
0.42857143
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_hiddenFirstColumnjalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_hiddenFirstColumn | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentViewTest.testGetVisibleAlignmentGapCharjalview.datamodel.AlignmentViewTest.testGetVisibleAlignmentGapChar | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testExpandContextjalview.analysis.AlignmentUtilsTests.testExpandContext | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.simpleGff3FileLoaderjalview.io.FeaturesFileTest.simpleGff3FileLoader | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testFindIndexWithoutHiddenSeqsjalview.datamodel.HiddenSequencesTest.testFindIndexWithoutHiddenSeqs | 1PASS | ||
0.42857143
|
jalview.viewmodel.ViewportRangesTest.testGetWrappedMaxScrolljalview.viewmodel.ViewportRangesTest.testGetWrappedMaxScroll | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.testParse_mixedJalviewGffjalview.io.FeaturesFileTest.testParse_mixedJalviewGff | 1PASS | ||
0.42857143
|
jalview.util.MappingUtilsTest.testMapColumnSelection_nulljalview.util.MappingUtilsTest.testMapColumnSelection_null | 1PASS | ||
0.42857143
|
jalview.datamodel.RangeElementsIteratorTest.testHasNextAndNextNoHiddenjalview.datamodel.RangeElementsIteratorTest.testHasNextAndNextNoHidden | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentSorterTest.testSortByFeature_scorejalview.analysis.AlignmentSorterTest.testSortByFeature_score | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testHideShowSequencejalview.datamodel.HiddenSequencesTest.testHideShowSequence | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testSetGetHasSearchResultsjalview.gui.AlignViewportTest.testSetGetHasSearchResults | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testAlignAs_dnaAsDnajalview.datamodel.AlignmentTest.testAlignAs_dnaAsDna | 1PASS | ||
0.42857143
|
jalview.io.gff.ExonerateHelperTest.testAddExonerateGffToAlignmentjalview.io.gff.ExonerateHelperTest.testAddExonerateGffToAlignment | 1PASS | ||
0.42857143
|
mc_view.PDBfileTest.testParsemc_view.PDBfileTest.testParse | 1PASS | ||
0.42857143
|
jalview.viewmodel.ViewportRangesTest.testSetStartEndResjalview.viewmodel.ViewportRangesTest.testSetStartEndRes | 1PASS | ||
0.42857143
|
mc_view.PDBfileTest.testParse_withJmol_noAnnotationsmc_view.PDBfileTest.testParse_withJmol_noAnnotations | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignedCodonFrameTest.testFindAlignedSequencejalview.datamodel.AlignedCodonFrameTest.testFindAlignedSequence | 1PASS | ||
0.42857143
|
jalview.viewmodel.ViewportRangesTest.testScrollUp_wrappedjalview.viewmodel.ViewportRangesTest.testScrollUp_wrapped | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_alternativeTranscriptsjalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_alternativeTranscripts | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_filterProductsjalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_filterProducts | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.simpleGff3RelaxedIdMatchingjalview.io.FeaturesFileTest.simpleGff3RelaxedIdMatching | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProtein_singleSequencejalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProtein_singleSequence | 1PASS | ||
0.42857143
|
jalview.schemes.ColourSchemePropertyTest.testGetColourNamejalview.schemes.ColourSchemePropertyTest.testGetColourName | 1PASS | ||
0.42857143
|
jalview.schemes.ResidueColourSchemeTest.testIsApplicableTo_dynamicColourSchemejalview.schemes.ResidueColourSchemeTest.testIsApplicableTo_dynamicColourScheme | 1PASS | ||
0.42857143
|
jalview.io.PfamFormatInputTest.testPfamFormatValidLimitsjalview.io.PfamFormatInputTest.testPfamFormatValidLimits | 1PASS | ||
0.42857143
|
jalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToProteinjalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToProtein | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testHideShowLastSequencesjalview.datamodel.HiddenSequencesTest.testHideShowLastSequences | 1PASS | ||
0.42857143
|
jalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommand_noFeaturesjalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommand_noFeatures | 1PASS | ||
0.42857143
|
jalview.viewmodel.ViewportRangesTest.testGetWrappedScrollPositionjalview.viewmodel.ViewportRangesTest.testGetWrappedScrollPosition | 1PASS | ||
0.42857143
|
jalview.analysis.SeqsetUtilsTest.testSeqFeatureAdditionjalview.analysis.SeqsetUtilsTest.testSeqFeatureAddition | 1PASS | ||
0.42857143
|
jalview.analysis.CrossRefTest.testFindXrefSequences_noDbrefsjalview.analysis.CrossRefTest.testFindXrefSequences_noDbrefs | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testIsHiddenjalview.datamodel.HiddenSequencesTest.testIsHidden | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testAdjustForHiddenSeqsjalview.datamodel.HiddenSequencesTest.testAdjustForHiddenSeqs | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsInMiddlejalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsInMiddle | 1PASS | ||
0.42857143
|
jalview.gui.AlignFrameTest.testNewView_colourThresholdsjalview.gui.AlignFrameTest.testNewView_colourThresholds | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.testPrintJalviewFormatjalview.io.FeaturesFileTest.testPrintJalviewFormat | 1PASS | ||
0.42857143
|
jalview.io.PhylipFileTests.testInterleavedDataExtractionjalview.io.PhylipFileTests.testInterleavedDataExtraction | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testConstructorjalview.viewmodel.OverviewDimensionsHideHiddenTest.testConstructor | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testGetWidthjalview.datamodel.HiddenSequencesTest.testGetWidth | 1PASS | ||
0.42857143
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_userdefjalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_userdef | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testSetGlobalColourSchemejalview.gui.AlignViewportTest.testSetGlobalColourScheme | 1PASS | ||
0.42857143
|
jalview.io.vcf.VCFLoaderTest.testDoLoad_reverseStrandjalview.io.vcf.VCFLoaderTest.testDoLoad_reverseStrand | 1PASS | ||
0.42857143
|
jalview.io.gff.GffTests.testResolveExonerateGffjalview.io.gff.GffTests.testResolveExonerateGff | 1PASS | ||
0.42857143
|
jalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDnajalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDna | 1PASS | ||
0.42857143
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_zappojalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_zappo | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testCreateDatasetAlignmentWithMappedToSeqsjalview.datamodel.AlignmentTest.testCreateDatasetAlignmentWithMappedToSeqs | 1PASS | ||
0.42857143
|
jalview.util.MappingUtilsTest.testMapEditCommandjalview.util.MappingUtilsTest.testMapEditCommand | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testAdjustHeightSequenceDeletedjalview.datamodel.HiddenSequencesTest.testAdjustHeightSequenceDeleted | 1PASS | ||
0.42857143
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplayjalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplay | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testFindOrCreateForNullCalcIdjalview.datamodel.AlignmentTest.testFindOrCreateForNullCalcId | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProteinjalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProtein | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.testParse_jalviewFeaturesOnlyjalview.io.FeaturesFileTest.testParse_jalviewFeaturesOnly | 1PASS | ||
0.42857143
|
jalview.analysis.FinderTest.testFindAll_sequenceIdsjalview.analysis.FinderTest.testFindAll_sequenceIds | 1PASS | ||
0.42857143
|
jalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_noAnnotationsjalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_noAnnotations | 1PASS | ||
0.42857143
|
jalview.io.Jalview2xmlTests.testSaveLoadFeatureColoursAndFiltersjalview.io.Jalview2xmlTests.testSaveLoadFeatureColoursAndFilters | 1PASS | ||
0.42857143
|
mc_view.PDBfileTest.testParse_withJmolAddAlignmentAnnotationsmc_view.PDBfileTest.testParse_withJmolAddAlignmentAnnotations | 1PASS | ||
0.42857143
|
jalview.io.RNAMLfileTest.testRnamlToStockholmIOjalview.io.RNAMLfileTest.testRnamlToStockholmIO | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_withStartAndStopCodonsjalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_withStartAndStopCodons | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsAtStartjalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsAtStart | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testAdjustHeightSequenceAddedjalview.datamodel.HiddenSequencesTest.testAdjustHeightSequenceAdded | 1PASS | ||
0.42857143
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeaturesjalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeatures | 1PASS | ||
0.42857143
|
jalview.analysis.DnaTest.testReverseCdnajalview.analysis.DnaTest.testReverseCdna | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withReference | 1PASS | ||
0.42857143
|
jalview.io.StockholmFileTest.secondaryStructureForRNASequencejalview.io.StockholmFileTest.secondaryStructureForRNASequence | 1PASS | ||
0.42857143
|
jalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_forward_targetgffjalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_forward_targetgff | 1PASS | ||
0.42857143
|
jalview.datamodel.RangeElementsIteratorTest.testLastNextNoHiddenjalview.datamodel.RangeElementsIteratorTest.testLastNextNoHidden | 1PASS | ||
0.42857143
|
jalview.gui.PaintRefresherTest.testGetAssociatedPanelsjalview.gui.PaintRefresherTest.testGetAssociatedPanels | 1PASS | ||
0.42857143
|
jalview.io.Jalview2xmlTests.testStoreAndRecoverPDBEntryjalview.io.Jalview2xmlTests.testStoreAndRecoverPDBEntry | 1PASS | ||
0.42857143
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_columnsjalview.util.MappingUtilsTest.testMapSequenceGroup_columns | 1PASS | ||
0.42857143
|
jalview.io.gff.InterProScanHelperTest.testProcessProteinMatchjalview.io.gff.InterProScanHelperTest.testProcessProteinMatch | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testAssertDatasetIsNormalisedjalview.datamodel.AlignmentTest.testAssertDatasetIsNormalised | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testUpdateConservation_qualityOnlyjalview.gui.AlignViewportTest.testUpdateConservation_qualityOnly | 1PASS | ||
0.42857143
|
jalview.viewmodel.ViewportRangesTest.testSetStartEndResWrappedjalview.viewmodel.ViewportRangesTest.testSetStartEndResWrapped | 1PASS | ||
0.42857143
|
jalview.commands.EditCommandTest.testCut_gappedWithFeaturesjalview.commands.EditCommandTest.testCut_gappedWithFeatures | 3FAIL | ||
0.42857143
|
jalview.io.Jalview2xmlTests.testRNAStructureRecoveryjalview.io.Jalview2xmlTests.testRNAStructureRecovery | 1PASS | ||
0.42857143
|
jalview.analysis.AnnotationSorterTest.testSort_timingUnsortedjalview.analysis.AnnotationSorterTest.testSort_timingUnsorted | 1PASS | ||
0.42857143
|
jalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappingsjalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappings | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testGetFullAlignmentjalview.datamodel.HiddenSequencesTest.testGetFullAlignment | 1PASS | ||
0.42857143
|
jalview.datamodel.SequenceGroupTest.testContainsjalview.datamodel.SequenceGroupTest.testContains | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.testPrintGffFormatjalview.io.FeaturesFileTest.testPrintGffFormat | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_withXrefsjalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_withXrefs | 1PASS | ||
0.42857143
|
jalview.analysis.CrossRefTest.testFindXrefSourcesForSequence_proteinToDnajalview.analysis.CrossRefTest.testFindXrefSourcesForSequence_proteinToDna | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testFindGroupjalview.datamodel.AlignmentTest.testFindGroup | 1PASS | ||
0.42857143
|
jalview.schemes.ColourSchemesTest.testRegisterColourSchemejalview.schemes.ColourSchemesTest.testRegisterColourScheme | 1PASS | ||
0.42857143
|
jalview.io.JSONFileTest.testGrpParsed_colourNonejalview.io.JSONFileTest.testGrpParsed_colourNone | 1PASS | ||
0.42857143
|
jalview.io.FeaturesFileTest.testParse_pureGff3jalview.io.FeaturesFileTest.testParse_pureGff3 | 1PASS | ||
0.42857143
|
jalview.viewmodel.ViewportRangesTest.testScrollToWrappedVisiblejalview.viewmodel.ViewportRangesTest.testScrollToWrappedVisible | 1PASS | ||
0.42857143
|
jalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGapsjalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGaps | 1PASS | ||
0.42857143
|
jalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroupjalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroup | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testHideShowSequence_withHiddenRepSequencejalview.datamodel.HiddenSequencesTest.testHideShowSequence_withHiddenRepSequence | 1PASS | ||
0.42857143
|
jalview.io.Jalview2xmlTests.testStoreAndRecoverColourThresholdsjalview.io.Jalview2xmlTests.testStoreAndRecoverColourThresholds | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testAlignAsSameSequencesMultipleSubSeqjalview.analysis.AlignmentUtilsTests.testAlignAsSameSequencesMultipleSubSeq | 1PASS | ||
0.42857143
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip | 1PASS | ||
0.42857143
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModeljalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testVerifyAlignmentDatasetRefsjalview.datamodel.AlignmentTest.testVerifyAlignmentDatasetRefs | 1PASS | ||
0.42857143
|
jalview.gui.PairwiseAlignmentPanelTest.testConstructor_withSelectionGroupjalview.gui.PairwiseAlignmentPanelTest.testConstructor_withSelectionGroup | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenSequencesTest.testGetHiddenSequencejalview.datamodel.HiddenSequencesTest.testGetHiddenSequence | 1PASS | ||
0.42857143
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumnjalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumn | 1PASS | ||
0.42857143
|
jalview.analysis.CrossRefTest.testFindXrefSequences_uniprotEmblManyToManyjalview.analysis.CrossRefTest.testFindXrefSequences_uniprotEmblManyToMany | 3FAIL | ||
0.42857143
|
jalview.io.PhylipFileTests.testSequentialDataExtractionjalview.io.PhylipFileTests.testSequentialDataExtraction | 1PASS | ||
0.42857143
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindFeatureAt_PointFeaturejalview.analysis.scoremodels.FeatureDistanceModelTest.testFindFeatureAt_PointFeature | 1PASS | ||
0.42857143
|
jalview.analysis.DnaTest.testTranslateCdna_simplejalview.analysis.DnaTest.testTranslateCdna_simple | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testDeleteSequenceBySeqjalview.datamodel.AlignmentTest.testDeleteSequenceBySeq | 1PASS | ||
0.42857143
|
jalview.schemes.ResidueColourSchemeTest.testGetNamejalview.schemes.ResidueColourSchemeTest.testGetName | 1PASS | ||
0.42857143
|
jalview.controller.AlignViewControllerTest.testFindColumnsWithFeaturejalview.controller.AlignViewControllerTest.testFindColumnsWithFeature | 1PASS | ||
0.42857143
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_zappojalview.renderer.ResidueColourFinderTest.testGetResidueColour_zappo | 1PASS | ||
0.42857143
|
jalview.datamodel.HiddenColumnsTest.testHasHiddenColumnsjalview.datamodel.HiddenColumnsTest.testHasHiddenColumns | 1PASS | ||
0.42857143
|
jalview.io.vcf.VCFLoaderTest.testDoLoad_vepCsqjalview.io.vcf.VCFLoaderTest.testDoLoad_vepCsq | 1PASS | ||
0.42857143
|
jalview.io.vcf.VCFLoaderTest.testDoLoadjalview.io.vcf.VCFLoaderTest.testDoLoad | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testPadGapsjalview.datamodel.AlignmentTest.testPadGaps | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsInMiddlejalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsInMiddle | 1PASS | ||
0.42857143
|
jalview.gui.SeqPanelTest.testAmbiguousAminoAcidGetsStatusMessagejalview.gui.SeqPanelTest.testAmbiguousAminoAcidGetsStatusMessage | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProteinjalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProtein | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testShowOrDontShowOccupancyjalview.gui.AlignViewportTest.testShowOrDontShowOccupancy | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_multipleProteinsjalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_multipleProteins | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testAddSequencePreserveDatasetIntegrityjalview.datamodel.AlignmentTest.testAddSequencePreserveDatasetIntegrity | 1PASS | ||
0.42857143
|
jalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_forwardToReversejalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_forwardToReverse | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testAlignProteinAsDnajalview.analysis.AlignmentUtilsTests.testAlignProteinAsDna | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testIsMappablejalview.analysis.AlignmentUtilsTests.testIsMappable | 1PASS | ||
0.42857143
|
jalview.analysis.AlignmentUtilsTests.testExpandContext_annotationjalview.analysis.AlignmentUtilsTests.testExpandContext_annotation | 1PASS | ||
0.42857143
|
jalview.schemes.ColourSchemesTest.testGetColourSchemejalview.schemes.ColourSchemesTest.testGetColourScheme | 1PASS | ||
0.42857143
|
jalview.io.StockholmFileTest.pfamFileIOjalview.io.StockholmFileTest.pfamFileIO | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testPropagateInsertionsjalview.datamodel.AlignmentTest.testPropagateInsertions | 1PASS | ||
0.42857143
|
jalview.analysis.AnnotationSorterTest.testSort_timingPresortedjalview.analysis.AnnotationSorterTest.testSort_timingPresorted | 1PASS | ||
0.42857143
|
jalview.io.StockholmFileTest.rfamFileIOjalview.io.StockholmFileTest.rfamFileIO | 1PASS | ||
0.42857143
|
jalview.io.PhylipFileTests.testInterleavedIOjalview.io.PhylipFileTests.testInterleavedIO | 1PASS | ||
0.42857143
|
jalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_forwardToForwardjalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_forwardToForward | 1PASS | ||
0.42857143
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testDraggingjalview.viewmodel.OverviewDimensionsHideHiddenTest.testDragging | 1PASS | ||
0.42857143
|
jalview.io.Jalview2xmlTests.testTCoffeeScoresjalview.io.Jalview2xmlTests.testTCoffeeScores | 1PASS | ||
0.42857143
|
jalview.viewmodel.ViewportRangesTest.testScrollRightWithHiddenjalview.viewmodel.ViewportRangesTest.testScrollRightWithHidden | 1PASS | ||
0.42857143
|
jalview.gui.FeatureSettingsTest.testSaveLoadjalview.gui.FeatureSettingsTest.testSaveLoad | 1PASS | ||
0.42857143
|
jalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_forward_querygffjalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_forward_querygff | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testAppendjalview.datamodel.AlignmentTest.testAppend | 1PASS | ||
0.42857143
|
jalview.gui.AlignViewportTest.testGetConsensusSeqjalview.gui.AlignViewportTest.testGetConsensusSeq | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testSetDataset_selfReferencejalview.datamodel.AlignmentTest.testSetDataset_selfReference | 1PASS | ||
0.42857143
|
jalview.io.PhylipFileTests.testSequentialIOjalview.io.PhylipFileTests.testSequentialIO | 1PASS | ||
0.42857143
|
jalview.datamodel.AlignmentTest.testAlignAs_proteinAsCdnajalview.datamodel.AlignmentTest.testAlignAs_proteinAsCdna | 1PASS | ||
0.42857143
|
jalview.io.Jalview2xmlTests.testColourByAnnotScoresjalview.io.Jalview2xmlTests.testColourByAnnotScores | 1PASS |
1 | /* | ||||||
2 | * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) | ||||||
3 | * Copyright (C) $$Year-Rel$$ The Jalview Authors | ||||||
4 | * | ||||||
5 | * This file is part of Jalview. | ||||||
6 | * | ||||||
7 | * Jalview is free software: you can redistribute it and/or | ||||||
8 | * modify it under the terms of the GNU General Public License | ||||||
9 | * as published by the Free Software Foundation, either version 3 | ||||||
10 | * of the License, or (at your option) any later version. | ||||||
11 | * | ||||||
12 | * Jalview is distributed in the hope that it will be useful, but | ||||||
13 | * WITHOUT ANY WARRANTY; without even the implied warranty | ||||||
14 | * of MERCHANTABILITY or FITNESS FOR A PARTICULAR | ||||||
15 | * PURPOSE. See the GNU General Public License for more details. | ||||||
16 | * | ||||||
17 | * You should have received a copy of the GNU General Public License | ||||||
18 | * along with Jalview. If not, see <http://www.gnu.org/licenses/>. | ||||||
19 | * The Jalview Authors are detailed in the 'AUTHORS' file. | ||||||
20 | */ | ||||||
21 | package jalview.datamodel; | ||||||
22 | |||||||
|
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23 | public final class HiddenCursorPosition | ||||||
24 | { | ||||||
25 | // index of last visited region | ||||||
26 | private final int regionIndex; | ||||||
27 | |||||||
28 | // number of hidden columns before last visited region | ||||||
29 | private final int hiddenSoFar; | ||||||
30 | |||||||
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31 | 211706 | public HiddenCursorPosition(int index, int hiddencount)... | |||||
32 | { | ||||||
33 | 211706 | regionIndex = index; | |||||
34 | 211706 | hiddenSoFar = hiddencount; | |||||
35 | } | ||||||
36 | |||||||
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37 | 422868 | public int getRegionIndex()... | |||||
38 | { | ||||||
39 | 422868 | return regionIndex; | |||||
40 | } | ||||||
41 | |||||||
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42 | 628198 | public int getHiddenSoFar()... | |||||
43 | { | ||||||
44 | 628198 | return hiddenSoFar; | |||||
45 | } | ||||||
46 | } |