|
jalview.util.LinkedIdentityHashSet
jalview.util.LinkedIdentityHashSet
|
0.7727272577.3%
|
|
|
jalview.util.LinkedIdentityHashSet.IdentityWrapper
jalview.util.LinkedIdentityHashSet.IdentityWrapper
|
0.7142857371.4%
|
|
|
jalview.analysis.AlignmentGenerator
jalview.analysis.AlignmentGenerator
|
0.5615384656.2%
|
|
|
jalview.datamodel.AlignedCodon
jalview.datamodel.AlignedCodon
|
0.4545454745.5%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.analysis.Dna
jalview.analysis.Dna
|
0.272394927.2%
|
|
|
jalview.datamodel.VisibleContigsIterator
jalview.datamodel.VisibleContigsIterator
|
0.2340425623.4%
|
|
|
jalview.datamodel.SequenceCursor
jalview.datamodel.SequenceCursor
|
0.2333333323.3%
|
|
|
jalview.io.FastaFile
jalview.io.FastaFile
|
0.229357822.9%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.2278597822.8%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.2255639122.6%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.2203389922%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.1785714317.9%
|
|
|
jalview.util.ShiftList
jalview.util.ShiftList
|
0.1694915316.9%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.154536415.5%
|
|
|
jalview.analysis.CodonComparator
jalview.analysis.CodonComparator
|
0.1290322512.9%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.1260162612.6%
|
|
|
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
|
0.12512.5%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.1187511.9%
|
|
|
jalview.schemes.ColourSchemeProperty
jalview.schemes.ColourSchemeProperty
|
0.1111111111.1%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.0748065347.5%
|
|
|
jalview.io.AlignFile
jalview.io.AlignFile
|
0.0714285757.1%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.064429536.4%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.054101225.4%
|
|
|
jalview.datamodel.AlignedCodonFrame
jalview.datamodel.AlignedCodonFrame
|
0.055%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.043478264.3%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.0387096783.9%
|
|
|
jalview.datamodel.ColumnSelection.IntList
jalview.datamodel.ColumnSelection.IntList
|
0.0373831763.7%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.0353773573.5%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.034055733.4%
|
|
|
jalview.datamodel.Mapping
jalview.datamodel.Mapping
|
0.0337552733.4%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.027397262.7%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0204081632%
|
|
|
jalview.viewmodel.ViewportRanges
jalview.viewmodel.ViewportRanges
|
0.019801982%
|
|
|
jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.0184842891.8%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.util.DBRefUtils
jalview.util.DBRefUtils
|
0.0145454551.5%
|
|
|
jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
|
0.0041322310.4%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.0037174720.4%
|
|
|
jalview.schemes.ResidueProperties
jalview.schemes.ResidueProperties
|
0.00331910860.3%
|
|
