jalviewX
Test testFindXrefSequences_forGeneAndTranscripts
| Test | ||||
|---|---|---|---|---|
| testFindXrefSequences_forGeneAndTranscripts | 3FAIL | 31 Oct 15:15:05 | 0.003 |
java.lang.NullPointerException at org.testng.internal.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:85) at org.testng.internal.Invoker.invokeMethod(Invoker.java:648) at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:834) at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:1142) at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:124) at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:108) at org.testng.TestRunner.privateRun(TestRunner.java:771) at org.testng.TestRunner.run(TestRunner.java:621) at org.testng.SuiteRunner.runTest(SuiteRunner.java:357) at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:352) at org.testng.SuiteRunner.privateRun(SuiteRunner.java:310) at org.testng.SuiteRunner.run(SuiteRunner.java:259) at org.testng.SuiteRunnerWorker.runSuite(SuiteRunnerWorker.java:52) at org.testng.SuiteRunnerWorker.run(SuiteRunnerWorker.java:86) at org.testng.TestNG.runSuitesSequentially(TestNG.java:1176) at org.testng.TestNG.runSuitesLocally(TestNG.java:1101) at org.testng.TestNG.run(TestNG.java:1009) at org.testng.TestNG.privateMain(TestNG.java:1316) at org.testng.TestNG.main(TestNG.java:1285) |
| testFindXrefSequences_forGeneAndTranscripts | ||||
|---|---|---|---|---|
| jalview.ws.SequenceFetcherFactory jalview.ws.SequenceFetcherFactory | 0.833333383.3% |
|
||
| jalview.ext.ensembl.EnsemblGenomes jalview.ext.ensembl.EnsemblGenomes | 0.777777877.8% |
|
||
| jalview.datamodel.features.RangeComparator jalview.datamodel.features.RangeComparator | 0.6470588464.7% |
|
||
| jalview.analysis.SequenceIdMatcher jalview.analysis.SequenceIdMatcher | 0.596491259.6% |
|
||
| jalview.util.IntRangeComparator jalview.util.IntRangeComparator | 0.571428657.1% |
|
||
| jalview.analysis.SequenceIdMatcher.SeqIdName jalview.analysis.SequenceIdMatcher.SeqIdName | 0.5526315655.3% |
|
||
| jalview.ws.dbsources.PfamSeed jalview.ws.dbsources.PfamSeed | 0.550% |
|
||
| jalview.io.gff.SequenceOntologyFactory jalview.io.gff.SequenceOntologyFactory | 0.550% |
|
||
| jalview.ext.ensembl.EnsemblSequenceFetcher jalview.ext.ensembl.EnsemblSequenceFetcher | 0.4615384646.2% |
|
||
| jalview.datamodel.features.SequenceFeatures jalview.datamodel.features.SequenceFeatures | 0.4437544.4% |
|
||
| jalview.ws.dbsources.RfamSeed jalview.ws.dbsources.RfamSeed | 0.4285714342.9% |
|
||
| jalview.ws.dbsources.PfamFull jalview.ws.dbsources.PfamFull | 0.4285714342.9% |
|
||
| jalview.datamodel.HiddenCursorPosition jalview.datamodel.HiddenCursorPosition | 0.4285714342.9% |
|
||
| jalview.datamodel.DBRefEntry jalview.datamodel.DBRefEntry | 0.3404255234% |
|
||
| jalview.datamodel.features.FeatureStore.SearchCriterion jalview.datamodel.features.FeatureStore.SearchCriterion | 0.3333333433.3% |
|
||
| jalview.analysis.CrossRef jalview.analysis.CrossRef | 0.331236933.1% |
|
||
| jalview.io.gff.SequenceOntologyLite jalview.io.gff.SequenceOntologyLite | 0.3214285732.1% |
|
||
| jalview.datamodel.features.FeatureStore jalview.datamodel.features.FeatureStore | 0.2992700629.9% |
|
||
| jalview.datamodel.DBRefSource jalview.datamodel.DBRefSource | 0.285714328.6% |
|
||
| jalview.ws.dbsources.EmblSource jalview.ws.dbsources.EmblSource | 0.2727272827.3% |
|
||
| jalview.ws.SequenceFetcher jalview.ws.SequenceFetcher | 0.2564102725.6% |
|
||
| jalview.util.DBRefUtils jalview.util.DBRefUtils | 0.2436363724.4% |
|
||
| jalview.util.Comparison jalview.util.Comparison | 0.2372881323.7% |
|
||
| jalview.ws.dbsources.EmblCdsSource jalview.ws.dbsources.EmblCdsSource | 0.2307692323.1% |
|
||
| jalview.ws.dbsources.Pfam jalview.ws.dbsources.Pfam | 0.1428571514.3% |
|
||
| jalview.ws.dbsources.Rfam jalview.ws.dbsources.Rfam | 0.1428571514.3% |
|
||
| jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping | 0.12512.5% |
|
||
| jalview.datamodel.Sequence jalview.datamodel.Sequence | 0.1107011111.1% |
|
||
| jalview.util.MapList jalview.util.MapList | 0.1064572410.6% |
|
||
| jalview.datamodel.SequenceFeature jalview.datamodel.SequenceFeature | 0.1060606110.6% |
|
||
| jalview.ws.seqfetcher.ASequenceFetcher jalview.ws.seqfetcher.ASequenceFetcher | 0.0933333349.3% |
|
||
| jalview.analysis.AlignmentUtils jalview.analysis.AlignmentUtils | 0.0815576768.2% |
|
||
| jalview.ws.dbsources.Xfam jalview.ws.dbsources.Xfam | 0.076923087.7% |
|
||
| jalview.ws.dbsources.Pdb jalview.ws.dbsources.Pdb | 0.063829796.4% |
|
||
| jalview.datamodel.AlignedCodonFrame jalview.datamodel.AlignedCodonFrame | 0.055% |
|
||
| jalview.ws.dbsources.EmblXmlSource jalview.ws.dbsources.EmblXmlSource | 0.0487804864.9% |
|
||
| jalview.ws.dbsources.Uniprot jalview.ws.dbsources.Uniprot | 0.043478264.3% |
|
||
| jalview.datamodel.Mapping jalview.datamodel.Mapping | 0.0337552733.4% |
|
||
| jalview.ext.ensembl.EnsemblRestClient jalview.ext.ensembl.EnsemblRestClient | 0.029556653% |
|
||
| jalview.util.MappingUtils jalview.util.MappingUtils | 0.0277777782.8% |
|
||
| jalview.ws.seqfetcher.DbSourceProxyImpl jalview.ws.seqfetcher.DbSourceProxyImpl | 0.0270270282.7% |
|
||
| jalview.bin.Cache jalview.bin.Cache | 0.018575851.9% |
|
||
| jalview.datamodel.Alignment jalview.datamodel.Alignment | 0.0169491531.7% |
|
||
| jalview.ext.ensembl.EnsemblGene jalview.ext.ensembl.EnsemblGene | 0.016326531.6% |
|
||
| jalview.datamodel.HiddenColumnsCursor jalview.datamodel.HiddenColumnsCursor | 0.0156251.6% |
|
||
| jalview.datamodel.HiddenSequences jalview.datamodel.HiddenSequences | 0.009132420.9% |
|
||
| jalview.ext.ensembl.EnsemblSeqProxy jalview.ext.ensembl.EnsemblSeqProxy | 0.00609756070.6% |
|
||
| jalview.schemes.ResidueProperties jalview.schemes.ResidueProperties | 0.00331910860.3% |
|
||
| jalview.datamodel.HiddenColumns jalview.datamodel.HiddenColumns | 0.00235849060.2% |
|
||