|
0.52380955
|
jalview.schemes.ColourSchemesTest.testRegisterColourSchemejalview.schemes.ColourSchemesTest.testRegisterColourScheme
|
1PASS
|
|
|
0.52380955
|
jalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotationjalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotation
|
1PASS
|
|
|
0.47619048
|
jalview.schemes.ClustalxColourSchemeTest.testFindColourjalview.schemes.ClustalxColourSchemeTest.testFindColour
|
1PASS
|
|
|
0.47619048
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistancesjalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances
|
1PASS
|
|
|
0.47619048
|
jalview.io.FeaturesFileTest.testParse_mixedJalviewGffjalview.io.FeaturesFileTest.testParse_mixedJalviewGff
|
1PASS
|
|
|
0.47619048
|
jalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGapsjalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGaps
|
1PASS
|
|
|
0.47619048
|
jalview.io.FeaturesFileTest.simpleGff3FileLoaderjalview.io.FeaturesFileTest.simpleGff3FileLoader
|
1PASS
|
|
|
0.47619048
|
jalview.io.gff.ExonerateHelperTest.testAddExonerateGffToAlignmentjalview.io.gff.ExonerateHelperTest.testAddExonerateGffToAlignment
|
1PASS
|
|
|
0.47619048
|
jalview.io.FeaturesFileTest.testPrintGffFormatjalview.io.FeaturesFileTest.testPrintGffFormat
|
1PASS
|
|
|
0.47619048
|
jalview.io.gff.GffTests.testResolveExonerateGffjalview.io.gff.GffTests.testResolveExonerateGff
|
1PASS
|
|
|
0.47619048
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances_withParamsjalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances_withParams
|
1PASS
|
|
|
0.47619048
|
jalview.datamodel.AlignmentViewTest.testGetVisibleContigsjalview.datamodel.AlignmentViewTest.testGetVisibleContigs
|
1PASS
|
|
|
0.47619048
|
jalview.io.JalviewExportPropertiesTests.testImportExportPeriodGapsjalview.io.JalviewExportPropertiesTests.testImportExportPeriodGaps
|
1PASS
|
|
|
0.47619048
|
jalview.io.FeaturesFileTest.testParsejalview.io.FeaturesFileTest.testParse
|
1PASS
|
|
|
0.47619048
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_HiddenColumnsjalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_HiddenColumns
|
1PASS
|
|
|
0.47619048
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_hiddenFirstColumnjalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_hiddenFirstColumn
|
1PASS
|
|
|
0.47619048
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModeljalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel
|
1PASS
|
|
|
0.47619048
|
jalview.io.FeaturesFileTest.testParse_jalviewFeaturesOnlyjalview.io.FeaturesFileTest.testParse_jalviewFeaturesOnly
|
1PASS
|
|
|
0.47619048
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindFeatureAt_PointFeaturejalview.analysis.scoremodels.FeatureDistanceModelTest.testFindFeatureAt_PointFeature
|
1PASS
|
|
|
0.47619048
|
jalview.io.FeaturesFileTest.testPrintJalviewFormatjalview.io.FeaturesFileTest.testPrintJalviewFormat
|
1PASS
|
|
|
0.47619048
|
jalview.structures.models.AAStructureBindingModelTest.testBuildColoursMapjalview.structures.models.AAStructureBindingModelTest.testBuildColoursMap
|
1PASS
|
|
|
0.42857143
|
jalview.io.FeaturesFileTest.testPrintGffFormat_withFiltersjalview.io.FeaturesFileTest.testPrintGffFormat_withFilters
|
1PASS
|
|
|
0.42857143
|
jalview.io.FeaturesFileTest.testParse_pureGff3jalview.io.FeaturesFileTest.testParse_pureGff3
|
1PASS
|
|
|
0.42857143
|
jalview.io.FeaturesFileTest.testPrintJalviewFormat_withFiltersjalview.io.FeaturesFileTest.testPrintJalviewFormat_withFilters
|
1PASS
|
|
|
0.4047619
|
jalview.io.CrossRef2xmlTests.openCrossrefsForEnsemblTwicejalview.io.CrossRef2xmlTests.openCrossrefsForEnsemblTwice
|
1PASS
|
|
|
0.4047619
|
jalview.project.Jalview2xmlTests.gatherViewsHerejalview.project.Jalview2xmlTests.gatherViewsHere
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumnjalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumn
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testGetConsensusSeqjalview.gui.AlignViewportTest.testGetConsensusSeq
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindColumn_unwrappedjalview.gui.SeqPanelTest.testFindColumn_unwrapped
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testMergeDatasetsforManyViewsjalview.project.Jalview2xmlTests.testMergeDatasetsforManyViews
|
1PASS
|
|
|
0.35714287
|
jalview.schemes.PIDColourSchemeTest.testFindColour_ignoreGapsjalview.schemes.PIDColourSchemeTest.testFindColour_ignoreGaps
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviewsjalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviews
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignFrameTest.testChangeColour_background_groupsAndThresholdsjalview.gui.AlignFrameTest.testChangeColour_background_groupsAndThresholds
|
1PASS
|
|
|
0.35714287
|
jalview.gui.ScalePanelTest.testSelectColumns_withHiddenjalview.gui.ScalePanelTest.testSelectColumns_withHidden
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_noAnnotationsjalview.gui.SeqPanelTest.testFindMousePosition_wrapped_noAnnotations
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testSetStatusReturnsNearestResiduePositionjalview.gui.SeqPanelTest.testSetStatusReturnsNearestResiduePosition
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testPcaViewAssociationjalview.project.Jalview2xmlTests.testPcaViewAssociation
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withNoReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withNoReference
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testSaveLoadFeatureColoursAndFiltersjalview.project.Jalview2xmlTests.testSaveLoadFeatureColoursAndFilters
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testRNAStructureRecoveryjalview.project.Jalview2xmlTests.testRNAStructureRecovery
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindColumn_wrappedjalview.gui.SeqPanelTest.testFindColumn_wrapped
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_annotationsjalview.gui.SeqPanelTest.testFindMousePosition_wrapped_annotations
|
1PASS
|
|
|
0.35714287
|
jalview.gui.ScalePanelTest.testBuildPopupMenujalview.gui.ScalePanelTest.testBuildPopupMenu
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignFrameTest.testNewView_dsRefPreservedjalview.gui.AlignFrameTest.testNewView_dsRefPreserved
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeaturesjalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeatures
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testIsVisiblejalview.renderer.seqfeatures.FeatureRendererTest.testIsVisible
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMadejalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMade
|
1PASS
|
|
|
0.35714287
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_forAlignFramejalview.gui.ColourMenuHelperTest.testAddMenuItems_forAlignFrame
|
1PASS
|
|
|
0.35714287
|
jalview.io.vcf.VCFLoaderTest.testDoLoadjalview.io.vcf.VCFLoaderTest.testDoLoad
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testSetGetHasSearchResultsjalview.gui.AlignViewportTest.testSetGetHasSearchResults
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettingsjalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettings
|
1PASS
|
|
|
0.35714287
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_nucleotidejalview.gui.ColourMenuHelperTest.testAddMenuItems_nucleotide
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testCopyViewSettingsjalview.project.Jalview2xmlTests.testCopyViewSettings
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.viewRefPdbAnnotationjalview.project.Jalview2xmlTests.viewRefPdbAnnotation
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testAmbiguousAminoAcidGetsStatusMessagejalview.gui.SeqPanelTest.testAmbiguousAminoAcidGetsStatusMessage
|
1PASS
|
|
|
0.35714287
|
jalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMol
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testDeregisterMapping_onCloseViewjalview.gui.AlignViewportTest.testDeregisterMapping_onCloseView
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntryjalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntry
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindComplementFeaturesAtResiduejalview.renderer.seqfeatures.FeatureRendererTest.testFindComplementFeaturesAtResidue
|
1PASS
|
|
|
0.35714287
|
jalview.io.vcf.VCFLoaderTest.testDoLoad_vepCsqjalview.io.vcf.VCFLoaderTest.testDoLoad_vepCsq
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withReference
|
1PASS
|
|
|
0.35714287
|
jalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroupjalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroup
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverGroupRepSeqsjalview.project.Jalview2xmlTests.testStoreAndRecoverGroupRepSeqs
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignFrameTest.testNewView_colourThresholdsjalview.gui.AlignFrameTest.testNewView_colourThresholds
|
1PASS
|
|
|
0.35714287
|
jalview.gui.PairwiseAlignmentPanelTest.testConstructor_withSelectionGroupjalview.gui.PairwiseAlignmentPanelTest.testConstructor_withSelectionGroup
|
1PASS
|
|
|
0.35714287
|
jalview.io.vcf.VCFLoaderTest.testDoLoad_reverseStrandjalview.io.vcf.VCFLoaderTest.testDoLoad_reverseStrand
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testSetGlobalColourSchemejalview.gui.AlignViewportTest.testSetGlobalColourScheme
|
1PASS
|
|
|
0.35714287
|
jalview.gui.FeatureSettingsTest.testSaveLoadjalview.gui.FeatureSettingsTest.testSaveLoad
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testTCoffeeScoresjalview.project.Jalview2xmlTests.testTCoffeeScores
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverColourThresholdsjalview.project.Jalview2xmlTests.testStoreAndRecoverColourThresholds
|
1PASS
|
|
|
0.35714287
|
jalview.schemes.ColourSchemesTest.testGetColourSchemejalview.schemes.ColourSchemesTest.testGetColourScheme
|
1PASS
|
|
|
0.35714287
|
jalview.ext.jmol.JmolParserTest.testAlignmentLoaderjalview.ext.jmol.JmolParserTest.testAlignmentLoader
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testSetSelectionGroupjalview.gui.AlignViewportTest.testSetSelectionGroup
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.ScaleRendererTest.testCalculateMarksjalview.renderer.ScaleRendererTest.testCalculateMarks
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scaleAbovejalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scaleAbove
|
1PASS
|
|
|
0.35714287
|
jalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMol
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testColourByAnnotScoresjalview.project.Jalview2xmlTests.testColourByAnnotScores
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testUpdateConservation_qualityOnlyjalview.gui.AlignViewportTest.testUpdateConservation_qualityOnly
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplayjalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplay
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignFrameTest.testHideFeatureColumnsjalview.gui.AlignFrameTest.testHideFeatureColumns
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testMergeDatasetsforViewsjalview.project.Jalview2xmlTests.testMergeDatasetsforViews
|
1PASS
|
|
|
0.35714287
|
jalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlightjalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlight
|
1PASS
|
|
|
0.35714287
|
jalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumnsjalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumns
|
1PASS
|
|
|
0.35714287
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverGeneLocusjalview.project.Jalview2xmlTests.testStoreAndRecoverGeneLocus
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testShowOrDontShowOccupancyjalview.gui.AlignViewportTest.testShowOrDontShowOccupancy
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testGetColourjalview.renderer.seqfeatures.FeatureRendererTest.testGetColour
|
1PASS
|
|
|
0.30952382
|
jalview.gui.ScalePanelTest.testPreventNegativeStartColumnjalview.gui.ScalePanelTest.testPreventNegativeStartColumn
|
1PASS
|
|
|
0.30952382
|
jalview.gui.PaintRefresherTest.testGetAssociatedPanelsjalview.gui.PaintRefresherTest.testGetAssociatedPanels
|
1PASS
|
|
|
0.30952382
|
jalview.gui.PopupMenuTest.testHideInsertionsjalview.gui.PopupMenuTest.testHideInsertions
|
1PASS
|
|
|
0.30952382
|
jalview.io.BackupFilesTest.backupsEnabledNoRollMaxTestjalview.io.BackupFilesTest.backupsEnabledNoRollMaxTest
|
1PASS
|
|
|
0.30952382
|
jalview.io.BackupFilesTest.backupsEnabledReverseRollMaxTestjalview.io.BackupFilesTest.backupsEnabledReverseRollMaxTest
|
1PASS
|
|
|
0.30952382
|
jalview.io.BackupFilesTest.backupsEnabledRollMaxTestjalview.io.BackupFilesTest.backupsEnabledRollMaxTest
|
1PASS
|
|
|
0.30952382
|
jalview.io.JSONFileTest.testGrpParsed_colourNonejalview.io.JSONFileTest.testGrpParsed_colourNone
|
1PASS
|
|
|
0.30952382
|
jalview.controller.AlignViewControllerTest.testFindColumnsWithFeaturejalview.controller.AlignViewControllerTest.testFindColumnsWithFeature
|
1PASS
|
|
|
0.30952382
|
jalview.io.BackupFilesTest.noBackupsEnabledTestjalview.io.BackupFilesTest.noBackupsEnabledTest
|
1PASS
|
|
|
0.30952382
|
jalview.io.JSONFileTest.testBioJSONRoundTripWithColourSchemeNonejalview.io.JSONFileTest.testBioJSONRoundTripWithColourSchemeNone
|
1PASS
|
|
|
0.2857143
|
jalview.util.MessageManagerTest.testGetStringOrReturnjalview.util.MessageManagerTest.testGetStringOrReturn
|
1PASS
|
|
|
0.2857143
|
jalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeaturesjalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeatures
|
1PASS
|
|
|
0.2857143
|
jalview.util.MessageManagerTest.testGetString_invalidjalview.util.MessageManagerTest.testGetString_invalid
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.ParsePropertiesTest.testGetScoresFromDescriptionjalview.analysis.ParsePropertiesTest.testGetScoresFromDescription
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testColourBySequencejalview.ext.rbvi.chimera.ChimeraXCommandsTest.testColourBySequence
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testUrlEncodejalview.util.StringUtilsTest.testUrlEncode
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testSelectType_showForAlljalview.gui.AnnotationChooserTest.testSelectType_showForAll
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetAtomSpec_alphaOnlyjalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetAtomSpec_alphaOnly
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetResidueSpecjalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetResidueSpec
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.AnnotationSorterTest.testSort_timingSemisortedjalview.analysis.AnnotationSorterTest.testSort_timingSemisorted
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testDeleteCharsjalview.util.StringUtilsTest.testDeleteChars
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testListResidueAttributesjalview.ext.rbvi.chimera.ChimeraXCommandsTest.testListResidueAttributes
|
1PASS
|
|
|
0.23809524
|
jalview.gui.ProgressBarTest.testSetProgressBarjalview.gui.ProgressBarTest.testSetProgressBar
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testInsertCharAtjalview.util.StringUtilsTest.testInsertCharAt
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetColourCommandjalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetColourCommand
|
1PASS
|
|
|
0.23809524
|
jalview.util.MapListTest.testEqualsjalview.util.MapListTest.testEquals
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_alreadyAddedjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_alreadyAdded
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testStripHtmlTagsjalview.util.StringUtilsTest.testStripHtmlTags
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testColourByChargejalview.ext.rbvi.chimera.ChimeraXCommandsTest.testColourByCharge
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testCloseViewerjalview.ext.rbvi.chimera.ChimeraXCommandsTest.testCloseViewer
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testDeselectType_showForSelectedjalview.gui.AnnotationChooserTest.testDeselectType_showForSelected
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testIsInActionScope_selectedScopejalview.gui.AnnotationChooserTest.testIsInActionScope_selectedScope
|
1PASS
|
|
|
0.23809524
|
jalview.util.MapListTest.testConstructor_withListsjalview.util.MapListTest.testConstructor_withLists
|
1PASS
|
|
|
0.23809524
|
jalview.util.MapListTest.testConstructor_mergeRangesjalview.util.MapListTest.testConstructor_mergeRanges
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.features.FeatureMatcherTest.testToStringjalview.datamodel.features.FeatureMatcherTest.testToString
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.RnaTest.testGetHelixMap_oneHelixjalview.analysis.RnaTest.testGetHelixMap_oneHelix
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AlignFrameTest.testColourThresholdActionsjalview.gui.AlignFrameTest.testColourThresholdActions
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildActionButtonsPaneljalview.gui.AnnotationChooserTest.testBuildActionButtonsPanel
|
1PASS
|
|
|
0.23809524
|
jalview.io.StockholmFileTest.rfamFileIOjalview.io.StockholmFileTest.rfamFileIO
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.AlignSeqTest.testIndexEncode_nucleotidejalview.analysis.AlignSeqTest.testIndexEncode_nucleotide
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testToSentenceCasejalview.util.StringUtilsTest.testToSentenceCase
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testUrlDecodejalview.util.StringUtilsTest.testUrlDecode
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.AlignSeqTest.testIndexEncode_peptidejalview.analysis.AlignSeqTest.testIndexEncode_peptide
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.AnnotationSorterTest.testSort_timingPresortedjalview.analysis.AnnotationSorterTest.testSort_timingPresorted
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.VisibleContigsIteratorTest.testMultipleVisibleRegionsjalview.datamodel.VisibleContigsIteratorTest.testMultipleVisibleRegions
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testColourByChainjalview.ext.rbvi.chimera.ChimeraXCommandsTest.testColourByChain
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.MappingTest.testCopyConstructorjalview.datamodel.MappingTest.testCopyConstructor
|
1PASS
|
|
|
0.23809524
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_peptidejalview.gui.ColourMenuHelperTest.testAddMenuItems_peptide
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildApplyToOptionsPanel_noSelectionGroupjalview.gui.AnnotationChooserTest.testBuildApplyToOptionsPanel_noSelectionGroup
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildShowHideOptionsPaneljalview.gui.AnnotationChooserTest.testBuildShowHideOptionsPanel
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testListToDelimitedStringjalview.util.StringUtilsTest.testListToDelimitedString
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testSeparatorListToArrayjalview.util.StringUtilsTest.testSeparatorListToArray
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testSelectType_showForSelectedjalview.gui.AnnotationChooserTest.testSelectType_showForSelected
|
1PASS
|
|
|
0.23809524
|
jalview.commands.EditCommandTest.testAppendEdit_insertGapjalview.commands.EditCommandTest.testAppendEdit_insertGap
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.FinderTest.testFindAll_sequenceIdsjalview.analysis.FinderTest.testFindAll_sequenceIds
|
1PASS
|
|
|
0.23809524
|
jalview.util.MapListTest.testGetInversejalview.util.MapListTest.testGetInverse
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testSelectType_hideForAlljalview.gui.AnnotationChooserTest.testSelectType_hideForAll
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_twoViewsjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_twoViews
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testCompareVersionsjalview.util.StringUtilsTest.testCompareVersions
|
1PASS
|
|
|
0.23809524
|
jalview.gui.SeqCanvasTest.testClear_HighlightAndSelectionjalview.gui.SeqCanvasTest.testClear_HighlightAndSelection
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildApplyToOptionsPanel_withSelectionGroupjalview.gui.AnnotationChooserTest.testBuildApplyToOptionsPanel_withSelectionGroup
|
1PASS
|
|
|
0.23809524
|
jalview.bin.JalviewLiteTest.testSeparatorListToArrayjalview.bin.JalviewLiteTest.testSeparatorListToArray
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testFocusViewjalview.ext.rbvi.chimera.ChimeraXCommandsTest.testFocusView
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetAtomSpecjalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetAtomSpec
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.AlignSeqTest.testExtractGapsjalview.analysis.AlignSeqTest.testExtractGaps
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testArrayToSeparatorListjalview.util.StringUtilsTest.testArrayToSeparatorList
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationRowFilterTest.testGetAnnotationItemsjalview.gui.AnnotationRowFilterTest.testGetAnnotationItems
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.AllRowsIteratorTest.testHasNextAndNextjalview.datamodel.AllRowsIteratorTest.testHasNextAndNext
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testResetOriginalStatejalview.gui.AnnotationChooserTest.testResetOriginalState
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetSelectedResiduesjalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetSelectedResidues
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildShowHidePaneljalview.gui.AnnotationChooserTest.testBuildShowHidePanel
|
1PASS
|
|
|
0.23809524
|
jalview.workers.AlignCalcManagerTest.testRemoveWorkerForAnnotationjalview.workers.AlignCalcManagerTest.testRemoveWorkerForAnnotation
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testSelectType_hideForSelectedjalview.gui.AnnotationChooserTest.testSelectType_hideForSelected
|
1PASS
|
|
|
0.23809524
|
jalview.io.FeaturesFileTest.readGff3Filejalview.io.FeaturesFileTest.readGff3File
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testParseIntjalview.util.StringUtilsTest.testParseInt
|
1PASS
|
|
|
0.23809524
|
jalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetModelStartNojalview.ext.rbvi.chimera.ChimeraXCommandsTest.testGetModelStartNo
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testDeselectType_showForAlljalview.gui.AnnotationChooserTest.testDeselectType_showForAll
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testGetAnnotationTypesjalview.gui.AnnotationChooserTest.testGetAnnotationTypes
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testIsInActionScope_unselectedScopejalview.gui.AnnotationChooserTest.testIsInActionScope_unselectedScope
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testDeselectType_hideForAlljalview.gui.AnnotationChooserTest.testDeselectType_hideForAll
|
1PASS
|
|
|
0.23809524
|
jalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_withAnnotationsjalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_withAnnotations
|
1PASS
|
|
|
0.23809524
|
jalview.util.StringUtilsTest.testGetLastTokenjalview.util.StringUtilsTest.testGetLastToken
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testDeselectType_hideForSelectedjalview.gui.AnnotationChooserTest.testDeselectType_hideForSelected
|
1PASS
|
|
|
0.23809524
|
mc_view.PDBfileTest.testParse_withJmol_noAnnotationsmc_view.PDBfileTest.testParse_withJmol_noAnnotations
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_userdefjalview.renderer.ResidueColourFinderTest.testGetResidueColour_userdef
|
1PASS
|
|
|
0.1904762
|
jalview.gui.AnnotationColumnChooserTest.testResetjalview.gui.AnnotationColumnChooserTest.testReset
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_userdefjalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_userdef
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_zappojalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_zappo
|
1PASS
|
|
|
0.1904762
|
jalview.gui.PopupMenuTest.testBuildAnnotationTypesMenusjalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_columnsjalview.util.MappingUtilsTest.testMapSequenceGroup_columns
|
1PASS
|
|
|
0.1904762
|
jalview.analysis.DnaTest.testReverseCdnajalview.analysis.DnaTest.testReverseCdna
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProteinjalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProtein
|
1PASS
|
|
|
0.1904762
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenujalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_nonejalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_none
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDnajalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDna
|
1PASS
|
|
|
0.1904762
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_notOnAlignmentjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_notOnAlignment
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumnsjalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumns
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_regionjalview.util.MappingUtilsTest.testMapSequenceGroup_region
|
1PASS
|
|
|
0.1904762
|
jalview.datamodel.HiddenSequencesTest.testHideShowSequence_withHiddenRepSequencejalview.datamodel.HiddenSequencesTest.testHideShowSequence_withHiddenRepSequence
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_sequencesjalview.util.MappingUtilsTest.testMapSequenceGroup_sequences
|
1PASS
|
|
|
0.1904762
|
jalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_showDisabledjalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_showDisabled
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapColumnSelection_nulljalview.util.MappingUtilsTest.testMapColumnSelection_null
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_zappojalview.renderer.ResidueColourFinderTest.testGetResidueColour_zappo
|
1PASS
|
|
|
0.1904762
|
jalview.util.MessageManagerTest.testFormatMessage_invalidjalview.util.MessageManagerTest.testFormatMessage_invalid
|
1PASS
|
|
|
0.1904762
|
jalview.gui.PopupMenuTest.testBuildLinkMenujalview.gui.PopupMenuTest.testBuildLinkMenu
|
1PASS
|
|
|
0.1904762
|
jalview.analysis.FinderTest.testFind_inDescriptionjalview.analysis.FinderTest.testFind_inDescription
|
1PASS
|
|
|
0.1904762
|
jalview.gui.FeatureSettingsTest.testGetColorTooltipjalview.gui.FeatureSettingsTest.testGetColorTooltip
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_nonejalview.renderer.ResidueColourFinderTest.testGetResidueColour_none
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodons
|
1PASS
|
|
|
0.11904762
|
jalview.io.SequenceAnnotationReportTest.testCreateSequenceAnnotationReport_withEllipsisjalview.io.SequenceAnnotationReportTest.testCreateSequenceAnnotationReport_withEllipsis
|
1PASS
|
|
|
0.11904762
|
jalview.io.StockholmFileTest.pfamFileIOjalview.io.StockholmFileTest.pfamFileIO
|
1PASS
|
|
|
0.11904762
|
jalview.datamodel.VisibleContigsIteratorTest.testVisibleRegionsAtHiddenEdgesjalview.datamodel.VisibleContigsIteratorTest.testVisibleRegionsAtHiddenEdges
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_simplejalview.analysis.DnaTest.testTranslateCdna_simple
|
1PASS
|
|
|
0.11904762
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_simpleOnlyjalview.gui.ColourMenuHelperTest.testAddMenuItems_simpleOnly
|
1PASS
|
|
|
0.11904762
|
jalview.gui.PopupMenuTest.testAddFeatureDetailsjalview.gui.PopupMenuTest.testAddFeatureDetails
|
1PASS
|
|
|
0.11904762
|
jalview.datamodel.features.FeatureMatcherSetTest.testToStringjalview.datamodel.features.FeatureMatcherSetTest.testToString
|
1PASS
|
|
|
0.11904762
|
jalview.datamodel.SequenceTest.testDeriveSequence_existingDatasetjalview.datamodel.SequenceTest.testDeriveSequence_existingDataset
|
1PASS
|
|
|
0.11904762
|
jalview.util.matcher.MatcherTest.testToStringjalview.util.matcher.MatcherTest.testToString
|
1PASS
|
|
|
0.11904762
|
jalview.util.MapListTest.testGetRangesjalview.util.MapListTest.testGetRanges
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumns
|
1PASS
|
|
|
0.11904762
|
jalview.io.StockholmFileTest.testAnnotationEquivalencejalview.io.StockholmFileTest.testAnnotationEquivalence
|
1PASS
|
|
|
0.11904762
|
jalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_hideDisabledjalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_hideDisabled
|
1PASS
|
|
|
0.11904762
|
jalview.fts.service.pdb.PDBFTSPanelTest.populateCmbSearchTargetOptionsTestjalview.fts.service.pdb.PDBFTSPanelTest.populateCmbSearchTargetOptionsTest
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.RnaTest.testGetSimpleBPs_unmatchedOpenerjalview.analysis.RnaTest.testGetSimpleBPs_unmatchedOpener
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_hiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_hiddenColumns
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependentjalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependent
|
1PASS
|
|
|
0.11904762
|
jalview.gui.StructureChooserTest.populateFilterComboBoxTestjalview.gui.StructureChooserTest.populateFilterComboBoxTest
|
1PASS
|
|
|
0.11904762
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_noReferenceAnnotationsjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_noReferenceAnnotations
|
1PASS
|
|
|
0.11904762
|
jalview.io.StockholmFileTest.pfamFileDataExtractionjalview.io.StockholmFileTest.pfamFileDataExtraction
|
1PASS
|
|
|
0.11904762
|
jalview.util.matcher.ConditionTest.testToStringjalview.util.matcher.ConditionTest.testToString
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.RnaTest.testGetSimpleBPs_unmatchedCloserjalview.analysis.RnaTest.testGetSimpleBPs_unmatchedCloser
|
1PASS
|
|
|
0.11904762
|
jalview.math.SparseMatrixTest.testConstructorjalview.math.SparseMatrixTest.testConstructor
|
1PASS
|
|
|
0.071428575
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_noSequenceSelectedjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_noSequenceSelected
|
1PASS
|
|
|
0.071428575
|
jalview.io.FeaturesFileTest.testOutputFeatureFiltersjalview.io.FeaturesFileTest.testOutputFeatureFilters
|
1PASS
|
|
|
0.071428575
|
jalview.io.FeaturesFileTest.simpleGff3RelaxedIdMatchingjalview.io.FeaturesFileTest.simpleGff3RelaxedIdMatching
|
1PASS
|
|
|
0.071428575
|
jalview.gui.AlignViewportTest.testHideRevealSequencesjalview.gui.AlignViewportTest.testHideRevealSequences
|
1PASS
|
|
|
0.071428575
|
jalview.schemes.FeatureColourTest.testGetDescriptionjalview.schemes.FeatureColourTest.testGetDescription
|
1PASS
|
|
|
0.071428575
|
jalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_wordBoundariesjalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_wordBoundaries
|
1PASS
|
|
|
0.071428575
|
jalview.datamodel.AllRowsIteratorTest.testLastNextjalview.datamodel.AllRowsIteratorTest.testLastNext
|
1PASS
|
|
|
0.071428575
|
jalview.datamodel.SequenceTest.testGapBitsetjalview.datamodel.SequenceTest.testGapBitset
|
1PASS
|
|
|
0.071428575
|
jalview.ext.jmol.JmolCommandsTest.testSetBackgroundColourjalview.ext.jmol.JmolCommandsTest.testSetBackgroundColour
|
1PASS
|
|
|
0.071428575
|
jalview.urls.UrlLinkTableModelTest.testColumnsjalview.urls.UrlLinkTableModelTest.testColumns
|
1PASS
|
|
|
0.071428575
|
jalview.gui.AppVarnaTest.testReplaceOddGapsjalview.gui.AppVarnaTest.testReplaceOddGaps
|
1PASS
|
|
|
0.071428575
|
mc_view.PDBfileTest.testParsemc_view.PDBfileTest.testParse
|
1PASS
|
|
|
0.071428575
|
jalview.gui.SeqPanelTest.testGetEditStatusMessage_lockedEditingjalview.gui.SeqPanelTest.testGetEditStatusMessage_lockedEditing
|
1PASS
|
|
|
0.071428575
|
jalview.gui.PopupMenuTest.testAddFeatureDetails_linkedFeaturesjalview.gui.PopupMenuTest.testAddFeatureDetails_linkedFeatures
|
1PASS
|
|
|
0.071428575
|
jalview.gui.SeqPanelTest.testGetEditStatusMessagejalview.gui.SeqPanelTest.testGetEditStatusMessage
|
1PASS
|
|
|
0.071428575
|
jalview.analysis.FinderTest.testFind_inSelectionjalview.analysis.FinderTest.testFind_inSelection
|
1PASS
|
|
|
0.071428575
|
jalview.datamodel.SequenceFeatureTest.testEqualsAndHashCodejalview.datamodel.SequenceFeatureTest.testEqualsAndHashCode
|
1PASS
|
|
|
0.071428575
|
jalview.renderer.ResidueShaderTest.testFindColour_gapColourjalview.renderer.ResidueShaderTest.testFindColour_gapColour
|
1PASS
|
|
|
0.071428575
|
jalview.datamodel.HiddenSequencesTest.testGetFullAlignmentjalview.datamodel.HiddenSequencesTest.testGetFullAlignment
|
1PASS
|
|