|
jalview.util.LinkedIdentityHashSet
jalview.util.LinkedIdentityHashSet
|
0.7727272577.3%
|
|
|
jalview.util.LinkedIdentityHashSet.IdentityWrapper
jalview.util.LinkedIdentityHashSet.IdentityWrapper
|
0.7142857371.4%
|
|
|
jalview.analysis.AlignmentGenerator
jalview.analysis.AlignmentGenerator
|
0.5615384656.2%
|
|
|
jalview.datamodel.RangeIterator
jalview.datamodel.RangeIterator
|
0.4594594545.9%
|
|
|
jalview.datamodel.AlignedCodon
jalview.datamodel.AlignedCodon
|
0.4545454745.5%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.analysis.Dna
jalview.analysis.Dna
|
0.2681564426.8%
|
|
|
jalview.datamodel.VisibleContigsIterator
jalview.datamodel.VisibleContigsIterator
|
0.2340425623.4%
|
|
|
jalview.datamodel.SequenceCursor
jalview.datamodel.SequenceCursor
|
0.2333333323.3%
|
|
|
jalview.io.FastaFile
jalview.io.FastaFile
|
0.229357822.9%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.2251838322.5%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.2203389922%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.2156398121.6%
|
|
|
jalview.util.ShiftList
jalview.util.ShiftList
|
0.1694915316.9%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.1563421815.6%
|
|
|
jalview.analysis.CodonComparator
jalview.analysis.CodonComparator
|
0.1290322512.9%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.1289062512.9%
|
|
|
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
|
0.12512.5%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.1210191112.1%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.1190476211.9%
|
|
|
jalview.schemes.ColourSchemeProperty
jalview.schemes.ColourSchemeProperty
|
0.1111111111.1%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.080188688%
|
|
|
jalview.analysis.GeneticCodes
jalview.analysis.GeneticCodes
|
0.074534167.5%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.073981717.4%
|
|
|
jalview.io.AlignFile
jalview.io.AlignFile
|
0.0714285757.1%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.0609911056.1%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.0539130425.4%
|
|
|
jalview.datamodel.AlignedCodonFrame
jalview.datamodel.AlignedCodonFrame
|
0.055%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.043478264.3%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.039260973.9%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.0387096783.9%
|
|
|
jalview.datamodel.ColumnSelection.IntList
jalview.datamodel.ColumnSelection.IntList
|
0.0373831763.7%
|
|
|
jalview.datamodel.Mapping
jalview.datamodel.Mapping
|
0.0337552733.4%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.027397262.7%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.020217732%
|
|
|
jalview.viewmodel.ViewportRanges
jalview.viewmodel.ViewportRanges
|
0.019801982%
|
|
|
jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.0184842891.8%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.00995024851%
|
|
|
jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
|
0.0041322310.4%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.00297619050.3%
|
|
