Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
ScalePanelTest	26	113	5	1.0100%	Show methods

Class ScalePanelTest

Class ScalePanelTest	Line # 26	Total Statements 113	Complexity 5	TOTAL Coverage 1.0100%
setUpJvOptionPane() : void   setUpJvOptionPane() : void	2828	2.02	1.01	1.0 1.0100%
testPreventNegativeStartColumn() : void   testPreventNegativeStartColumn() : void	3535	13.013	1.01	1.0 1.0100%
testSelectColumns_withHidden() : void   testSelectColumns_withHidden() : void	6565	22.022	1.01	1.0 1.0100%
testBuildPopupMenu() : void   testBuildPopupMenu() : void	102102	74.074	1.01	1.0 1.0100%
setUpBeforeClass() : void   setUpBeforeClass() : void	228228	2.02	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	0.63559324	jalview.gui.ScalePanelTest.testBuildPopupMenujalview.gui.ScalePanelTest.testBuildPopupMenu	1PASS
	0.19491525	jalview.gui.ScalePanelTest.testSelectColumns_withHiddenjalview.gui.ScalePanelTest.testSelectColumns_withHidden	1PASS
	0.118644066	jalview.gui.ScalePanelTest.testPreventNegativeStartColumnjalview.gui.ScalePanelTest.testPreventNegativeStartColumn	1PASS

 

Source view

1		package jalview.gui;
2
3		import static org.testng.Assert.assertEquals;
4		import static org.testng.Assert.assertTrue;
5
6		import jalview.bin.Cache;
7		import jalview.bin.Jalview;
8		import jalview.datamodel.Alignment;
9		import jalview.datamodel.AlignmentI;
10		import jalview.datamodel.Sequence;
11		import jalview.datamodel.SequenceGroup;
12		import jalview.datamodel.SequenceI;
13		import jalview.io.DataSourceType;
14		import jalview.io.FileLoader;
15		import jalview.util.MessageManager;
16		import jalview.viewmodel.ViewportRanges;
17
18		import java.awt.event.MouseEvent;
19
20		import javax.swing.JMenuItem;
21		import javax.swing.JPopupMenu;
22
23		import org.testng.annotations.BeforeClass;
24		import org.testng.annotations.Test;
25
		100% Uncovered Elements: 0 (118) Complexity: 5 Complexity Density: 0.04
26		public class ScalePanelTest
27		{
		100% Uncovered Elements: 0 (2) Complexity: 1 Complexity Density: 0.5
28	1	@BeforeClass(alwaysRun = true)...
29		public void setUpJvOptionPane()
30		{
31	1	JvOptionPane.setInteractiveMode(false);
32	1	JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
33		}
34
		100% Uncovered Elements: 0 (13) Complexity: 1 Complexity Density: 0.08 1PASS
35	1	@Test(groups = "Functional")...
36		public void testPreventNegativeStartColumn()
37		{
38	1	SequenceI seq1 = new Sequence("Seq1", "MATRESS");
39	1	SequenceI seq2 = new Sequence("Seq2", "MADNESS");
40	1	AlignmentI al = new Alignment(new SequenceI[] { seq1, seq2 });
41
42	1	AlignFrame alignFrame = new AlignFrame(al, al.getWidth(),
43		al.getHeight());
44	1	ScalePanel scalePanel = alignFrame.alignPanel.getScalePanel();
45
46	1	MouseEvent mouse = new MouseEvent(scalePanel, 0, 1, 0, 4, 0, 1, false);
47	1	scalePanel.mousePressed(mouse);
48	1	scalePanel.mouseDragged(mouse);
49
50		// simulate dragging selection leftwards beyond the sequences giving
51		// negative X
52	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, -30, 0, 1, false);
53
54	1	scalePanel.mouseReleased(mouse);
55
56	1	SequenceGroup sg = scalePanel.av.getSelectionGroup();
57	1	int startCol = sg.getStartRes();
58
59	1	assertTrue(startCol >= 0);
60		}
61
62		/**
63		* Test for JAL-3212
64		*/
		100% Uncovered Elements: 0 (22) Complexity: 1 Complexity Density: 0.05 1PASS
65	1	@Test(groups = "Functional")...
66		public void testSelectColumns_withHidden()
67		{
68	1	String seq1 = ">Seq1\nANTOFAGASTAVALPARAISOMONTEVIDEOANTANANARIVO";
69	1	AlignFrame alignFrame = new FileLoader().LoadFileWaitTillLoaded(seq1,
70		DataSourceType.PASTE);
71	1	ScalePanel scalePanel = alignFrame.alignPanel.getScalePanel();
72
73		/*
74		* hide columns 1-20 (of 43); then 'drag' to select columns 30-31;
75		* 31 is 51 in absolute columns but bug JAL-3212 reduces it to
76		* endRes which is 22
77		*/
78	1	AlignViewport viewport = alignFrame.getViewport();
79	1	ViewportRanges ranges = viewport.getRanges();
80	1	assertEquals(ranges.getStartRes(), 0);
81	1	assertEquals(ranges.getEndRes(), 42);
82	1	viewport.hideColumns(0, 19);
83	1	alignFrame.alignPanel.updateLayout();
84	1	assertEquals(ranges.getStartRes(), 0);
85	1	assertEquals(ranges.getEndRes(), 22);
86
87	1	int cw = viewport.getCharWidth();
88	1	int xPos = 9 * cw + 2;
89	1	MouseEvent mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1,
90		false);
91	1	scalePanel.mousePressed(mouse);
92	1	scalePanel.mouseDragged(mouse);
93	1	xPos += cw;
94	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
95	1	scalePanel.mouseReleased(mouse);
96
97	1	SequenceGroup sg = scalePanel.av.getSelectionGroup();
98	1	assertEquals(sg.getStartRes(), 29);
99	1	assertEquals(sg.getEndRes(), 30);
100		}
101
		100% Uncovered Elements: 0 (74) Complexity: 1 Complexity Density: 0.01 1PASS
102	1	@Test(groups = "Functional")...
103		public void testBuildPopupMenu()
104		{
105	1	final String hide = MessageManager.getString("label.hide_columns");
106	1	final String reveal = MessageManager.getString("label.reveal");
107	1	final String revealAll = MessageManager.getString("action.reveal_all");
108
109	1	String seq1 = ">Seq1\nANTOFAGASTA";
110	1	AlignFrame alignFrame = new FileLoader().LoadFileWaitTillLoaded(seq1,
111		DataSourceType.PASTE);
112	1	ScalePanel scalePanel = alignFrame.alignPanel.getScalePanel();
113	1	AlignViewport viewport = alignFrame.getViewport();
114	1	int cw = viewport.getCharWidth();
115
116		/*
117		* hide columns 3-4 (counting from 0)
118		*/
119	1	viewport.hideColumns(3, 4);
120	1	alignFrame.alignPanel.updateLayout();
121
122		/*
123		* verify popup menu left/right of hidden column marker
124		* NB need to call mouseMoved first as this sets field 'reveal'
125		*/
126	1	int xPos = 1 * cw + 2; // 2 columns left of hidden marker
127	1	MouseEvent mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1,
128		false);
129	1	scalePanel.mouseMoved(mouse);
130	1	JPopupMenu popup = scalePanel.buildPopupMenu(1);
131	1	assertEquals(popup.getSubElements().length, 0);
132
133		/*
134		* popup just left of hidden marker has 'Reveal'
135		*/
136	1	xPos = 2 * cw + 2;
137	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
138	1	scalePanel.mouseMoved(mouse);
139	1	popup = scalePanel.buildPopupMenu(2);
140	1	assertEquals(popup.getSubElements().length, 1);
141	1	assertEquals(((JMenuItem) popup.getSubElements()[0]).getText(), reveal);
142
143		/*
144		* popup just right of hidden marker has 'Reveal'
145		*/
146	1	xPos = 3 * cw + 2;
147	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
148	1	scalePanel.mouseMoved(mouse);
149	1	popup = scalePanel.buildPopupMenu(5); // allowing for 2 hidden columns
150	1	assertEquals(popup.getSubElements().length, 1);
151	1	assertEquals(((JMenuItem) popup.getSubElements()[0]).getText(), reveal);
152
153		/*
154		* popup further right is empty
155		*/
156	1	xPos = 4 * cw + 2;
157	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
158	1	scalePanel.mouseMoved(mouse);
159	1	popup = scalePanel.buildPopupMenu(6); // allowing for 2 hidden columns
160	1	assertEquals(popup.getSubElements().length, 0);
161
162		/*
163		* 'drag' to select columns around the hidden column marker
164		*/
165	1	xPos = 1 * cw + 2;
166	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
167	1	scalePanel.mousePressed(mouse);
168	1	scalePanel.mouseDragged(mouse);
169	1	xPos = 5 * cw + 2;
170	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
171	1	scalePanel.mouseReleased(mouse);
172
173		/*
174		* popup 2 columns left of marker: 'Hide' only
175		*/
176	1	xPos = 1 * cw + 2;
177	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
178	1	scalePanel.mouseMoved(mouse);
179	1	popup = scalePanel.buildPopupMenu(1);
180	1	assertEquals(popup.getSubElements().length, 1);
181	1	assertEquals(((JMenuItem) popup.getSubElements()[0]).getText(), hide);
182
183		/*
184		* popup just left of marker: 'Reveal' and 'Hide'
185		*/
186	1	xPos = 2 * cw + 2;
187	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
188	1	scalePanel.mouseMoved(mouse);
189	1	popup = scalePanel.buildPopupMenu(1);
190	1	assertEquals(popup.getSubElements().length, 2);
191	1	assertEquals(((JMenuItem) popup.getSubElements()[0]).getText(), reveal);
192	1	assertEquals(((JMenuItem) popup.getSubElements()[1]).getText(), hide);
193
194		/*
195		* popup just right of marker: 'Reveal' and 'Hide'
196		*/
197	1	xPos = 3 * cw + 2;
198	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
199	1	scalePanel.mouseMoved(mouse);
200	1	popup = scalePanel.buildPopupMenu(5);
201	1	assertEquals(popup.getSubElements().length, 2);
202	1	assertEquals(((JMenuItem) popup.getSubElements()[0]).getText(), reveal);
203	1	assertEquals(((JMenuItem) popup.getSubElements()[1]).getText(), hide);
204
205		/*
206		* hiding a second region adds option 'Reveal all' to 'Reveal'
207		*/
208	1	viewport.hideColumns(6, 7);
209	1	alignFrame.alignPanel.updateLayout();
210	1	xPos = 3 * cw + 2;
211	1	mouse = new MouseEvent(scalePanel, 0, 1, 0, xPos, 0, 1, false);
212	1	scalePanel.mouseMoved(mouse);
213	1	popup = scalePanel.buildPopupMenu(5);
214	1	assertEquals(popup.getSubElements().length, 3);
215	1	assertEquals(((JMenuItem) popup.getSubElements()[0]).getText(), reveal);
216	1	assertEquals(((JMenuItem) popup.getSubElements()[1]).getText(),
217		revealAll);
218	1	assertEquals(((JMenuItem) popup.getSubElements()[2]).getText(), hide);
219
220	1	alignFrame.deselectAllSequenceMenuItem_actionPerformed(null);
221	1	popup = scalePanel.buildPopupMenu(5);
222	1	assertEquals(popup.getSubElements().length, 2);
223	1	assertEquals(((JMenuItem) popup.getSubElements()[0]).getText(), reveal);
224	1	assertEquals(((JMenuItem) popup.getSubElements()[1]).getText(),
225		revealAll);
226		}
227
		100% Uncovered Elements: 0 (2) Complexity: 1 Complexity Density: 0.5
228	1	@BeforeClass(alwaysRun = true)...
229		public static void setUpBeforeClass() throws Exception
230		{
231		/*
232		* use read-only test properties file
233		*/
234	1	Cache.loadProperties("test/jalview/io/testProps.jvprops");
235	1	Jalview.main(new String[] { "-nonews" });
236		}
237
238		}