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Coverage Report

  1. Project Clover database Thu Aug 13 2020 12:04:21 BST
  2. Package jalview.schemes

File NucleotideColourScheme.java

 

Coverage histogram

../../img/srcFileCovDistChart10.png
0% of files have more coverage

Code metrics

0
4
4
1
64
26
4
1
1
4
1

Classes

Class Line # Actions
NucleotideColourScheme 32 4 4
1.0100%
 

Contributing tests

This file is covered by 104 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package jalview.schemes;
22   
23    import jalview.api.AlignViewportI;
24    import jalview.datamodel.AnnotatedCollectionI;
25   
26    /**
27    * DOCUMENT ME!
28    *
29    * @author $author$
30    * @version $Revision$
31    */
 
32    public class NucleotideColourScheme extends ResidueColourScheme
33    {
34    /**
35    * Creates a new NucleotideColourScheme object.
36    */
 
37  27 toggle public NucleotideColourScheme()
38    {
39  27 super(ResidueProperties.nucleotideIndex, ResidueProperties.nucleotide);
40    }
41   
 
42  281 toggle @Override
43    public boolean isNucleotideSpecific()
44    {
45  281 return true;
46    }
47   
 
48  281 toggle @Override
49    public String getSchemeName()
50    {
51  281 return JalviewColourScheme.Nucleotide.toString();
52    }
53   
54    /**
55    * Returns a new instance of this colour scheme with which the given data may
56    * be coloured
57    */
 
58  2 toggle @Override
59    public ColourSchemeI getInstance(AlignViewportI view,
60    AnnotatedCollectionI coll)
61    {
62  2 return new NucleotideColourScheme();
63    }
64    }
  • Report generated by OpenClover v 4.4.1 on Thu Aug 13 2020 12:06:48 BST using coverage data from Thu Aug 13 2020 12:06:40 BST.
  • OpenClover is free and open-source software.