|
0.52380955
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.52380955
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.52380955
|
jalview.schemes.ColourSchemesTest.testRegisterColourSchemejalview.schemes.ColourSchemesTest.testRegisterColourScheme
|
1PASS
|
|
|
0.52380955
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.52380955
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.52380955
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.52380955
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.47619048
|
jalview.datamodel.AlignmentViewTest.testGetVisibleContigsjalview.datamodel.AlignmentViewTest.testGetVisibleContigs
|
1PASS
|
|
|
0.42857143
|
jalview.io.WindowsFileLoadAndSaveTest.loadAndSaveAlignmentjalview.io.WindowsFileLoadAndSaveTest.loadAndSaveAlignment
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.io.JalviewExportPropertiesTests.testImportExportPeriodGapsjalview.io.JalviewExportPropertiesTests.testImportExportPeriodGaps
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.4047619
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.35714287
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_peptidejalview.gui.ColourMenuHelperTest.testAddMenuItems_peptide
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindColumn_and_FindAlignmentColumn_wrappedjalview.gui.SeqPanelTest.testFindColumn_and_FindAlignmentColumn_wrapped
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testSetGlobalColourSchemejalview.gui.AlignViewportTest.testSetGlobalColourScheme
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withReference
|
1PASS
|
|
|
0.35714287
|
jalview.gui.ScalePanelTest.testSelectColumns_withHiddenjalview.gui.ScalePanelTest.testSelectColumns_withHidden
|
1PASS
|
|
|
0.35714287
|
jalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGapsjalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGaps
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignmentPanelTest.testSetOverviewTitlejalview.gui.AlignmentPanelTest.testSetOverviewTitle
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplayjalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplay
|
1PASS
|
|
|
0.35714287
|
jalview.gui.FeatureSettingsTest.testSaveLoadjalview.gui.FeatureSettingsTest.testSaveLoad
|
1PASS
|
|
|
0.35714287
|
jalview.gui.QuitHandlerTest.testInstantQuitjalview.gui.QuitHandlerTest.testInstantQuit
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scaleAbovejalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scaleAbove
|
1PASS
|
|
|
0.35714287
|
jalview.gui.QuitHandlerTest.testWaitForSaveQuitjalview.gui.QuitHandlerTest.testWaitForSaveQuit
|
1PASS
|
|
|
0.35714287
|
jalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMol
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testSetGetHasSearchResultsjalview.gui.AlignViewportTest.testSetGetHasSearchResults
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindComplementFeaturesAtResiduejalview.renderer.seqfeatures.FeatureRendererTest.testFindComplementFeaturesAtResidue
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testSetStatusReturnsNearestResiduePositionjalview.gui.SeqPanelTest.testSetStatusReturnsNearestResiduePosition
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignFrameTest.testNewView_colourThresholdsjalview.gui.AlignFrameTest.testNewView_colourThresholds
|
1PASS
|
|
|
0.35714287
|
jalview.ext.jmol.JmolParserTest.testAlignmentLoaderjalview.ext.jmol.JmolParserTest.testAlignmentLoader
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignFrameTest.testNewView_dsRefPreservedjalview.gui.AlignFrameTest.testNewView_dsRefPreserved
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testGetColourjalview.renderer.seqfeatures.FeatureRendererTest.testGetColour
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumnjalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumn
|
1PASS
|
|
|
0.35714287
|
jalview.gui.QuitHandlerTest.testUnsavedChangesjalview.gui.QuitHandlerTest.testUnsavedChanges
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testIsVisiblejalview.renderer.seqfeatures.FeatureRendererTest.testIsVisible
|
1PASS
|
|
|
0.35714287
|
jalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlightjalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlight
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testSetSelectionGroupjalview.gui.AlignViewportTest.testSetSelectionGroup
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeaturesjalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeatures
|
1PASS
|
|
|
0.35714287
|
jalview.structures.models.AAStructureBindingModelTest.testBuildColoursMapjalview.structures.models.AAStructureBindingModelTest.testBuildColoursMap
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignFrameTest.testHideFeatureColumnsjalview.gui.AlignFrameTest.testHideFeatureColumns
|
1PASS
|
|
|
0.35714287
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_nucleotidejalview.gui.ColourMenuHelperTest.testAddMenuItems_nucleotide
|
1PASS
|
|
|
0.35714287
|
jalview.gui.ScalePanelTest.testBuildPopupMenujalview.gui.ScalePanelTest.testBuildPopupMenu
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testDeregisterMapping_onCloseViewjalview.gui.AlignViewportTest.testDeregisterMapping_onCloseView
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testGetConsensusSeqjalview.gui.AlignViewportTest.testGetConsensusSeq
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scales_longSequencejalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scales_longSequence
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testAmbiguousAminoAcidGetsStatusMessagejalview.gui.SeqPanelTest.testAmbiguousAminoAcidGetsStatusMessage
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testUpdateConservation_qualityOnlyjalview.gui.AlignViewportTest.testUpdateConservation_qualityOnly
|
1PASS
|
|
|
0.35714287
|
jalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMol
|
1PASS
|
|
|
0.35714287
|
jalview.schemes.ClustalxColourSchemeTest.testFindColourjalview.schemes.ClustalxColourSchemeTest.testFindColour
|
1PASS
|
|
|
0.35714287
|
jalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroupjalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroup
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignmentPanelTest.testSetOverviewTitle_automaticOverviewjalview.gui.AlignmentPanelTest.testSetOverviewTitle_automaticOverview
|
1PASS
|
|
|
0.35714287
|
jalview.io.JSONFileTest.testBioJSONRoundTripWithColourSchemeNonejalview.io.JSONFileTest.testBioJSONRoundTripWithColourSchemeNone
|
1PASS
|
|
|
0.35714287
|
jalview.gui.PairwiseAlignmentPanelTest.testConstructor_withSelectionGroupjalview.gui.PairwiseAlignmentPanelTest.testConstructor_withSelectionGroup
|
1PASS
|
|
|
0.35714287
|
jalview.gui.QuitHandlerTest.testSavedProjectChangesjalview.gui.QuitHandlerTest.testSavedProjectChanges
|
1PASS
|
|
|
0.35714287
|
jalview.analysis.AverageDistanceEngineTest.testUPGMAEnginejalview.analysis.AverageDistanceEngineTest.testUPGMAEngine
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_annotationsjalview.gui.SeqPanelTest.testFindMousePosition_wrapped_annotations
|
1PASS
|
|
|
0.35714287
|
jalview.gui.DesktopTests.testInternalCopyPastejalview.gui.DesktopTests.testInternalCopyPaste
|
1PASS
|
|
|
0.35714287
|
jalview.gui.QuitHandlerTest.testSavedAlignmentChangesjalview.gui.QuitHandlerTest.testSavedAlignmentChanges
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindColumn_unwrappedjalview.gui.SeqPanelTest.testFindColumn_unwrapped
|
1PASS
|
|
|
0.35714287
|
jalview.gui.QuitHandlerTest.testNoGUIUnsavedChangesjalview.gui.QuitHandlerTest.testNoGUIUnsavedChanges
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignFrameTest.testChangeColour_background_groupsAndThresholdsjalview.gui.AlignFrameTest.testChangeColour_background_groupsAndThresholds
|
1PASS
|
|
|
0.35714287
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_noAnnotationsjalview.gui.SeqPanelTest.testFindMousePosition_wrapped_noAnnotations
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testShowOrDontShowOccupancyjalview.gui.AlignViewportTest.testShowOrDontShowOccupancy
|
1PASS
|
|
|
0.35714287
|
jalview.schemes.ColourSchemesTest.testGetColourSchemejalview.schemes.ColourSchemesTest.testGetColourScheme
|
1PASS
|
|
|
0.35714287
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withNoReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withNoReference
|
1PASS
|
|
|
0.35714287
|
jalview.gui.QuitHandlerTest.testForceQuitjalview.gui.QuitHandlerTest.testForceQuit
|
1PASS
|
|
|
0.35714287
|
jalview.renderer.ScaleRendererTest.testCalculateMarksjalview.renderer.ScaleRendererTest.testCalculateMarks
|
1PASS
|
|
|
0.30952382
|
jalview.io.JSONFileTest.testGrpParsed_colourNonejalview.io.JSONFileTest.testGrpParsed_colourNone
|
1PASS
|
|
|
0.30952382
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_forAlignFramejalview.gui.ColourMenuHelperTest.testAddMenuItems_forAlignFrame
|
1PASS
|
|
|
0.30952382
|
jalview.gui.PopupMenuTest.testHideInsertionsjalview.gui.PopupMenuTest.testHideInsertions
|
1PASS
|
|
|
0.30952382
|
jalview.gui.ScalePanelTest.testPreventNegativeStartColumnjalview.gui.ScalePanelTest.testPreventNegativeStartColumn
|
1PASS
|
|
|
0.30952382
|
jalview.gui.PaintRefresherTest.testGetAssociatedPanelsjalview.gui.PaintRefresherTest.testGetAssociatedPanels
|
1PASS
|
|
|
0.30952382
|
jalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumnsjalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumns
|
1PASS
|
|
|
0.30952382
|
jalview.controller.AlignViewControllerTest.testFindColumnsWithFeaturejalview.controller.AlignViewControllerTest.testFindColumnsWithFeature
|
1PASS
|
|
|
0.2857143
|
jalview.util.MessageManagerTest.testGetString_invalidjalview.util.MessageManagerTest.testGetString_invalid
|
1PASS
|
|
|
0.2857143
|
jalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeaturesjalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeatures
|
1PASS
|
|
|
0.2857143
|
jalview.util.MessageManagerTest.testGetStringOrReturnjalview.util.MessageManagerTest.testGetStringOrReturn
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationLabelsTest.testGetStatusMessagejalview.gui.AnnotationLabelsTest.testGetStatusMessage
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testSelectType_hideForSelectedjalview.gui.AnnotationChooserTest.testSelectType_hideForSelected
|
1PASS
|
|
|
0.23809524
|
jalview.ws.dbsources.UniprotTest.testimportOfProblemEntriesjalview.ws.dbsources.UniprotTest.testimportOfProblemEntries
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_notOnAlignmentjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_notOnAlignment
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildShowHideOptionsPaneljalview.gui.AnnotationChooserTest.testBuildShowHideOptionsPanel
|
1PASS
|
|
|
0.23809524
|
jalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequence
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.ResidueCountTest.testGetSymbolCounts_nucleotidejalview.datamodel.ResidueCountTest.testGetSymbolCounts_nucleotide
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testAddFeatureDetails_linkedFeaturesjalview.gui.PopupMenuTest.testAddFeatureDetails_linkedFeatures
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testSelectType_hideForAlljalview.gui.AnnotationChooserTest.testSelectType_hideForAll
|
1PASS
|
|
|
0.23809524
|
jalview.urls.DesktopUrlProviderFactoryTest.testCreateUrlProviderjalview.urls.DesktopUrlProviderFactoryTest.testCreateUrlProvider
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenujalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu
|
1PASS
|
|
|
0.23809524
|
jalview.urls.CustomUrlProviderTest.testUrlLinksjalview.urls.CustomUrlProviderTest.testUrlLinks
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_alreadyAddedjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_alreadyAdded
|
1PASS
|
|
|
0.23809524
|
jalview.gui.StructureChooserTest.fetchStructuresInfoMockedTestjalview.gui.StructureChooserTest.fetchStructuresInfoMockedTest
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.CodingUtilsTest.testEncodeCodonjalview.analysis.CodingUtilsTest.testEncodeCodon
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AlignmentPanelTest.testCalculateIdWidth_noArgsjalview.gui.AlignmentPanelTest.testCalculateIdWidth_noArgs
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testGetAnnotationTypesjalview.gui.AnnotationChooserTest.testGetAnnotationTypes
|
1PASS
|
|
|
0.23809524
|
jalview.io.StockholmFileTest.pfamFileIOjalview.io.StockholmFileTest.pfamFileIO
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testSelectType_showForAlljalview.gui.AnnotationChooserTest.testSelectType_showForAll
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationLabelsTest.testGetTooltipjalview.gui.AnnotationLabelsTest.testGetTooltip
|
1PASS
|
|
|
0.23809524
|
jalview.schemes.Blosum62ColourSchemeTest.testFindColourjalview.schemes.Blosum62ColourSchemeTest.testFindColour
|
1PASS
|
|
|
0.23809524
|
jalview.renderer.ResidueShaderTest.testFindColour_gapColourjalview.renderer.ResidueShaderTest.testFindColour_gapColour
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.AlignmentUtilsTests.testAlignAs_alternateTranscriptsUngappedjalview.analysis.AlignmentUtilsTests.testAlignAs_alternateTranscriptsUngapped
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testBuildLinkMenujalview.gui.PopupMenuTest.testBuildLinkMenu
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.CrossRefTest.testFindXDbRefsjalview.analysis.CrossRefTest.testFindXDbRefs
|
1PASS
|
|
|
0.23809524
|
jalview.io.JalviewFileChooserTest.checkDefaultSaveFormatjalview.io.JalviewFileChooserTest.checkDefaultSaveFormat
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.AlignmentUtilsTests.testAlignProteinAsDnajalview.analysis.AlignmentUtilsTests.testAlignProteinAsDna
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testDeselectType_hideForAlljalview.gui.AnnotationChooserTest.testDeselectType_hideForAll
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AlignViewportTest.testGetSelectionAsNewSequences_withContactMatricesjalview.gui.AlignViewportTest.testGetSelectionAsNewSequences_withContactMatrices
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testBuildAnnotationTypesMenusjalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.HiddenSequencesTest.testGetFullAlignmentjalview.datamodel.HiddenSequencesTest.testGetFullAlignment
|
1PASS
|
|
|
0.23809524
|
jalview.ext.jmol.JmolParserTest.testFileParserjalview.ext.jmol.JmolParserTest.testFileParser
|
1PASS
|
|
|
0.23809524
|
jalview.fts.threedbeacons.TDBeaconsFTSRestClientTest.testMockTDBRequestjalview.fts.threedbeacons.TDBeaconsFTSRestClientTest.testMockTDBRequest
|
1PASS
|
|
|
0.23809524
|
jalview.fts.threedbeacons.TDBeaconsFTSRestClientTest.getDataColumnByNameOrCodejalview.fts.threedbeacons.TDBeaconsFTSRestClientTest.getDataColumnByNameOrCode
|
1PASS
|
|
|
0.23809524
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_extraDataLinesjalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_extraDataLines
|
1PASS
|
|
|
0.23809524
|
jalview.gui.SeqPanelTest.testGetEditStatusMessagejalview.gui.SeqPanelTest.testGetEditStatusMessage
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testIsInActionScope_unselectedScopejalview.gui.AnnotationChooserTest.testIsInActionScope_unselectedScope
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildActionButtonsPaneljalview.gui.AnnotationChooserTest.testBuildActionButtonsPanel
|
1PASS
|
|
|
0.23809524
|
jalview.ext.jmol.JmolCommandsTest.testSuperposeStructuresjalview.ext.jmol.JmolCommandsTest.testSuperposeStructures
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.AnnotationSorterTest.testSort_timingPresortedjalview.analysis.AnnotationSorterTest.testSort_timingPresorted
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testSelectType_showForSelectedjalview.gui.AnnotationChooserTest.testSelectType_showForSelected
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.HiddenSequencesTest.testGetSizejalview.datamodel.HiddenSequencesTest.testGetSize
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.HiddenSequencesTest.testGetWidthjalview.datamodel.HiddenSequencesTest.testGetWidth
|
1PASS
|
|
|
0.23809524
|
jalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappingsjalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappings
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildShowHidePaneljalview.gui.AnnotationChooserTest.testBuildShowHidePanel
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationColumnChooserTest.testResetjalview.gui.AnnotationColumnChooserTest.testReset
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.23809524
|
jalview.io.StockholmFileTest.pfamFileDataExtractionjalview.io.StockholmFileTest.pfamFileDataExtraction
|
1PASS
|
|
|
0.23809524
|
jalview.io.JalviewFileChooserTest.checkDefaultSaveFormatjalview.io.JalviewFileChooserTest.checkDefaultSaveFormat
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testResetOriginalStatejalview.gui.AnnotationChooserTest.testResetOriginalState
|
1PASS
|
|
|
0.23809524
|
jalview.io.JalviewFileChooserTest.checkDefaultSaveFormatjalview.io.JalviewFileChooserTest.checkDefaultSaveFormat
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.FinderTest.testFind_withHiddenColumnsjalview.analysis.FinderTest.testFind_withHiddenColumns
|
1PASS
|
|
|
0.23809524
|
jalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequence
|
1PASS
|
|
|
0.23809524
|
jalview.structures.models.AAStructureBindingModelTest.testFindSuperposableResidues_hiddenColumnjalview.structures.models.AAStructureBindingModelTest.testFindSuperposableResidues_hiddenColumn
|
1PASS
|
|
|
0.23809524
|
jalview.urls.CustomUrlProviderTest.testDefaultUrljalview.urls.CustomUrlProviderTest.testDefaultUrl
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testIsInActionScope_selectedScopejalview.gui.AnnotationChooserTest.testIsInActionScope_selectedScope
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.AlignedCodonFrameTest.testGetCoveringCodonMappingjalview.datamodel.AlignedCodonFrameTest.testGetCoveringCodonMapping
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testDeselectType_showForSelectedjalview.gui.AnnotationChooserTest.testDeselectType_showForSelected
|
1PASS
|
|
|
0.23809524
|
jalview.renderer.ResidueShaderTest.testAboveThresholdjalview.renderer.ResidueShaderTest.testAboveThreshold
|
1PASS
|
|
|
0.23809524
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNotEnoughColumnsjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNotEnoughColumns
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_hideDisabledjalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_hideDisabled
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildApplyToOptionsPanel_noSelectionGroupjalview.gui.AnnotationChooserTest.testBuildApplyToOptionsPanel_noSelectionGroup
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AlignFrameTest.testColourThresholdActionsjalview.gui.AlignFrameTest.testColourThresholdActions
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.AlignmentUtilsTests.testAlignProteinAsDna_incompleteStartCodonjalview.analysis.AlignmentUtilsTests.testAlignProteinAsDna_incompleteStartCodon
|
1PASS
|
|
|
0.23809524
|
jalview.gui.SeqCanvasTest.testClear_HighlightAndSelectionjalview.gui.SeqCanvasTest.testClear_HighlightAndSelection
|
1PASS
|
|
|
0.23809524
|
jalview.gui.SeqPanelTest.testGetEditStatusMessage_lockedEditingjalview.gui.SeqPanelTest.testGetEditStatusMessage_lockedEditing
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.23809524
|
jalview.analysis.FinderTest.testFind_regexjalview.analysis.FinderTest.testFind_regex
|
1PASS
|
|
|
0.23809524
|
jalview.gui.StructureChooserTest.displayTDBQueryTestjalview.gui.StructureChooserTest.displayTDBQueryTest
|
1PASS
|
|
|
0.23809524
|
jalview.renderer.ResidueShaderTest.testApplyConservationjalview.renderer.ResidueShaderTest.testApplyConservation
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_showDisabledjalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_showDisabled
|
1PASS
|
|
|
0.23809524
|
jalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons_forSubSequencesjalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons_forSubSequences
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testDeselectType_showForAlljalview.gui.AnnotationChooserTest.testDeselectType_showForAll
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testBuildApplyToOptionsPanel_withSelectionGroupjalview.gui.AnnotationChooserTest.testBuildApplyToOptionsPanel_withSelectionGroup
|
1PASS
|
|
|
0.23809524
|
jalview.io.StockholmFileTest.dbrefOutputjalview.io.StockholmFileTest.dbrefOutput
|
1PASS
|
|
|
0.23809524
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_noSequenceSelectedjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_noSequenceSelected
|
1PASS
|
|
|
0.23809524
|
jalview.gui.AnnotationChooserTest.testDeselectType_hideForSelectedjalview.gui.AnnotationChooserTest.testDeselectType_hideForSelected
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_nonejalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_none
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_sharedDatasetjalview.util.MappingUtilsTest.testMapSequenceGroup_sharedDataset
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_zappojalview.renderer.ResidueColourFinderTest.testGetResidueColour_zappo
|
1PASS
|
|
|
0.1904762
|
jalview.analysis.DnaTest.testReverseCdnajalview.analysis.DnaTest.testReverseCdna
|
1PASS
|
|
|
0.1904762
|
jalview.util.MessageManagerTest.testFormatMessage_invalidjalview.util.MessageManagerTest.testFormatMessage_invalid
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapColumnSelection_nulljalview.util.MappingUtilsTest.testMapColumnSelection_null
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDnajalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDna
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_nonejalview.renderer.ResidueColourFinderTest.testGetResidueColour_none
|
1PASS
|
|
|
0.1904762
|
jalview.gui.FeatureSettingsTest.testGetColorTooltipjalview.gui.FeatureSettingsTest.testGetColorTooltip
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_userdefjalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_userdef
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_regionjalview.util.MappingUtilsTest.testMapSequenceGroup_region
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProteinjalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProtein
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_zappojalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_zappo
|
1PASS
|
|
|
0.1904762
|
jalview.analysis.FinderTest.testFindAll_sequenceIdsjalview.analysis.FinderTest.testFindAll_sequenceIds
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_columnsjalview.util.MappingUtilsTest.testMapSequenceGroup_columns
|
1PASS
|
|
|
0.1904762
|
jalview.fts.threedbeacons.TDBeaconsPanelTest.populateCmbSearchTargetOptionsTestjalview.fts.threedbeacons.TDBeaconsPanelTest.populateCmbSearchTargetOptionsTest
|
1PASS
|
|
|
0.1904762
|
jalview.fts.service.pdb.PDBFTSPanelTest.populateCmbSearchTargetOptionsTestjalview.fts.service.pdb.PDBFTSPanelTest.populateCmbSearchTargetOptionsTest
|
1PASS
|
|
|
0.1904762
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_userdefjalview.renderer.ResidueColourFinderTest.testGetResidueColour_userdef
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumnsjalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumns
|
1PASS
|
|
|
0.1904762
|
jalview.datamodel.HiddenSequencesTest.testHideShowSequence_withHiddenRepSequencejalview.datamodel.HiddenSequencesTest.testHideShowSequence_withHiddenRepSequence
|
1PASS
|
|
|
0.1904762
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_sequencesjalview.util.MappingUtilsTest.testMapSequenceGroup_sequences
|
1PASS
|
|
|
0.1904762
|
jalview.gui.StructureChooserTest.populateFilterComboBoxTestjalview.gui.StructureChooserTest.populateFilterComboBoxTest
|
1PASS
|
|
|
0.1904762
|
jalview.analysis.FinderTest.testFind_inDescriptionjalview.analysis.FinderTest.testFind_inDescription
|
1PASS
|
|
|
0.16666667
|
jalview.ws.dbsources.EBIAlphaFoldTest.checkPAEimportjalview.ws.dbsources.EBIAlphaFoldTest.checkPAEimport
|
1PASS
|
|
|
0.16666667
|
jalview.gui.JvOptionPaneTest.showInternalConfirmDialogFamilyTestjalview.gui.JvOptionPaneTest.showInternalConfirmDialogFamilyTest
|
1PASS
|
|
|
0.11904762
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNameMissingjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNameMissing
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_simplejalview.analysis.DnaTest.testTranslateCdna_simple
|
1PASS
|
|
|
0.11904762
|
jalview.datamodel.ResidueCountTest.testGetSymbolCounts_peptidejalview.datamodel.ResidueCountTest.testGetSymbolCounts_peptide
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.FinderTest.testFind_residueNumberjalview.analysis.FinderTest.testFind_residueNumber
|
1PASS
|
|
|
0.11904762
|
jalview.io.JalviewFileChooserTest.checkDefaultSaveFormatjalview.io.JalviewFileChooserTest.checkDefaultSaveFormat
|
1PASS
|
|
|
0.11904762
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.11904762
|
jalview.datamodel.HiddenSequencesTest.testHideShowLastSequencesjalview.datamodel.HiddenSequencesTest.testHideShowLastSequences
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_hiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_hiddenColumns
|
1PASS
|
|
|
0.11904762
|
jalview.gui.PopupMenuTest.testAddFeatureDetailsjalview.gui.PopupMenuTest.testAddFeatureDetails
|
1PASS
|
|
|
0.11904762
|
jalview.io.JalviewFileChooserTest.checkDefaultSaveFormatjalview.io.JalviewFileChooserTest.checkDefaultSaveFormat
|
1PASS
|
|
|
0.11904762
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.11904762
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.11904762
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.11904762
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.11904762
|
jalview.datamodel.AlignedCodonFrameTest.testCouldReplaceSequencejalview.datamodel.AlignedCodonFrameTest.testCouldReplaceSequence
|
1PASS
|
|
|
0.11904762
|
jalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_withAnnotationsjalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_withAnnotations
|
1PASS
|
|
|
0.11904762
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiTooManyColumnsjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiTooManyColumns
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependentjalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependent
|
1PASS
|
|
|
0.11904762
|
jalview.io.StockholmFileTest.testAnnotationEquivalencejalview.io.StockholmFileTest.testAnnotationEquivalence
|
1PASS
|
|
|
0.11904762
|
jalview.datamodel.AlignedCodonFrameTest.testGetCoveringMappingjalview.datamodel.AlignedCodonFrameTest.testGetCoveringMapping
|
1PASS
|
|
|
0.11904762
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_simpleOnlyjalview.gui.ColourMenuHelperTest.testAddMenuItems_simpleOnly
|
1PASS
|
|
|
0.11904762
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_tooManyRowsjalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_tooManyRows
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodons
|
1PASS
|
|
|
0.11904762
|
jalview.datamodel.HiddenSequencesTest.testGetHiddenSequencejalview.datamodel.HiddenSequencesTest.testGetHiddenSequence
|
1PASS
|
|
|
0.11904762
|
jalview.util.MappingUtilsTest.testContainsjalview.util.MappingUtilsTest.testContains
|
1PASS
|
|
|
0.11904762
|
jalview.io.SequenceAnnotationReportTest.testCreateSequenceAnnotationReport_withEllipsisjalview.io.SequenceAnnotationReportTest.testCreateSequenceAnnotationReport_withEllipsis
|
1PASS
|
|
|
0.11904762
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumns
|
1PASS
|
|
|
0.071428575
|
jalview.util.ParseHtmlBodyAndLinksTest.testParseHtml_withLinksWithEncodingjalview.util.ParseHtmlBodyAndLinksTest.testParseHtml_withLinksWithEncoding
|
1PASS
|
|
|
0.071428575
|
jalview.urls.UrlLinkTableModelTest.testColumnsjalview.urls.UrlLinkTableModelTest.testColumns
|
1PASS
|
|
|
0.071428575
|
jalview.io.RNAMLfileTest.testRnamlSeqImportjalview.io.RNAMLfileTest.testRnamlSeqImport
|
1PASS
|
|
|
0.071428575
|
jalview.analysis.AlignmentUtilsTests.testFindCdsPositionsjalview.analysis.AlignmentUtilsTests.testFindCdsPositions
|
1PASS
|
|
|
0.071428575
|
jalview.io.JalviewFileChooserTest.checkDefaultSaveFormatjalview.io.JalviewFileChooserTest.checkDefaultSaveFormat
|
1PASS
|
|
|
0.071428575
|
jalview.datamodel.AlignedCodonFrameTest.testAddMapjalview.datamodel.AlignedCodonFrameTest.testAddMap
|
1PASS
|
|
|
0.071428575
|
jalview.datamodel.AlignedCodonFrameTest.testGetMappedCodonsjalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons
|
1PASS
|
|
|
0.071428575
|
jalview.schemes.FeatureColourTest.testGetDescriptionjalview.schemes.FeatureColourTest.testGetDescription
|
1PASS
|
|
|
0.071428575
|
jalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons_dnaVariantsjalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons_dnaVariants
|
1PASS
|
|