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com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
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0.1666666716.7%
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jalview.analysis.scoremodels.ScoreModels
jalview.analysis.scoremodels.ScoreModels
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0.1636363616.4%
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jalview.bin.argparser.Arg
jalview.bin.argparser.Arg
|
0.162650616.3%
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jalview.gui.AlignFrame
jalview.gui.AlignFrame
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0.1615735916.2%
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com.stevesoft.pat.parsePerl
com.stevesoft.pat.parsePerl
|
0.1598639516%
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jalview.io.FileFormat
jalview.io.FileFormat
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0.1550387615.5%
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jalview.ws.seqfetcher.ASequenceFetcher
jalview.ws.seqfetcher.ASequenceFetcher
|
0.1511111115.1%
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jalview.schemes.TCoffeeColourScheme
jalview.schemes.TCoffeeColourScheme
|
0.1475409914.8%
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jalview.ws.jws2.JabaParamStore
jalview.ws.jws2.JabaParamStore
|
0.1458333314.6%
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jalview.workers.AlignCalcWorker
jalview.workers.AlignCalcWorker
|
0.1428571514.3%
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jalview.gui.ScalePanel
jalview.gui.ScalePanel
|
0.142322114.2%
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jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.1418067214.2%
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jalview.ws.dbsources.Rfam
jalview.ws.dbsources.Rfam
|
0.12512.5%
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jalview.schemes.Blosum62ColourScheme
jalview.schemes.Blosum62ColourScheme
|
0.1176470611.8%
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jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.11428571511.4%
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jalview.structure.StructureImportSettings
jalview.structure.StructureImportSettings
|
0.11428571511.4%
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jalview.gui.PromptUserConfig
jalview.gui.PromptUserConfig
|
0.1136363711.4%
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jalview.util.ShortcutKeyMaskExWrapper
jalview.util.ShortcutKeyMaskExWrapper
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0.1111111111.1%
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jalview.schemes.ColourSchemeProperty
jalview.schemes.ColourSchemeProperty
|
0.1111111111.1%
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jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.1038062310.4%
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jalview.ws.rest.params.AnnotationFile
jalview.ws.rest.params.AnnotationFile
|
0.10256410410.3%
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jalview.io.StockholmFile
jalview.io.StockholmFile
|
0.098930489.9%
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org.json.simple.parser.Yytoken
org.json.simple.parser.Yytoken
|
0.096774199.7%
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jalview.util.ColorUtils
jalview.util.ColorUtils
|
0.096774199.7%
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com.stevesoft.pat.Start
com.stevesoft.pat.Start
|
0.090909099.1%
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jalview.util.LaunchUtils
jalview.util.LaunchUtils
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0.090686289.1%
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com.stevesoft.pat.Or
com.stevesoft.pat.Or
|
0.089743599%
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jalview.ws.dbsources.Pfam
jalview.ws.dbsources.Pfam
|
0.086956528.7%
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jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.084577118.5%
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jalview.schemes.RNAHelicesColour
jalview.schemes.RNAHelicesColour
|
0.082191788.2%
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jalview.gui.ProgressBar
jalview.gui.ProgressBar
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0.081300818.1%
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jalview.ws.seqfetcher.DbSourceProxyImpl
jalview.ws.seqfetcher.DbSourceProxyImpl
|
0.081081088.1%
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jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.088%
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jalview.gui.SeqCanvas
jalview.gui.SeqCanvas
|
0.07515037.5%
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com.stevesoft.pat.OrMark
com.stevesoft.pat.OrMark
|
0.0757.5%
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com.stevesoft.pat.FastMulti
com.stevesoft.pat.FastMulti
|
0.0740740757.4%
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jalview.schemes.ColourSchemes
jalview.schemes.ColourSchemes
|
0.070175447%
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jalview.analysis.scoremodels.ScoreMatrix
jalview.analysis.scoremodels.ScoreMatrix
|
0.069958857%
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jalview.analysis.CrossRef
jalview.analysis.CrossRef
|
0.069672137%
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com.stevesoft.pat.End
com.stevesoft.pat.End
|
0.068965526.9%
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jalview.gui.IdPanel
jalview.gui.IdPanel
|
0.067264576.7%
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jalview.schemes.PIDColourScheme
jalview.schemes.PIDColourScheme
|
0.066666676.7%
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com.stevesoft.pat.RegOpt
com.stevesoft.pat.RegOpt
|
0.06474826.5%
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jalview.gui.ViewSelectionMenu
jalview.gui.ViewSelectionMenu
|
0.059405945.9%
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jalview.ws.jws2.AAConClient
jalview.ws.jws2.AAConClient
|
0.0571428575.7%
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jalview.datamodel.ColumnSelection.IntList
jalview.datamodel.ColumnSelection.IntList
|
0.0560747655.6%
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jalview.ws.dbsources.Pdb
jalview.ws.dbsources.Pdb
|
0.0545454555.5%
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jalview.analysis.GeneticCodes
jalview.analysis.GeneticCodes
|
0.0496894425%
|
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jalview.util.DBRefUtils
jalview.util.DBRefUtils
|
0.045317224.5%
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jalview.ws.jws1.JPredClient
jalview.ws.jws1.JPredClient
|
0.043478264.3%
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jalview.gui.WsParamSetManager
jalview.gui.WsParamSetManager
|
0.0429447854.3%
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jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.040094344%
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org.json.simple.JSONObject
org.json.simple.JSONObject
|
0.037735853.8%
|
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jalview.ws.jws1.SeqSearchWSClient
jalview.ws.jws1.SeqSearchWSClient
|
0.029629633%
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jalview.ext.ensembl.EnsemblRestClient
jalview.ext.ensembl.EnsemblRestClient
|
0.0283018872.8%
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jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.027397262.7%
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jalview.gui.AlignExportOptions
jalview.gui.AlignExportOptions
|
0.026315792.6%
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jalview.ws.jws1.MsaWSClient
jalview.ws.jws1.MsaWSClient
|
0.026315792.6%
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jalview.ws.dbsources.Uniprot
jalview.ws.dbsources.Uniprot
|
0.0233463032.3%
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jalview.gui.Preferences
jalview.gui.Preferences
|
0.0184397161.8%
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jalview.schemes.ClustalxColourScheme
jalview.schemes.ClustalxColourScheme
|
0.0169491531.7%
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jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.016414971.6%
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jalview.ext.ensembl.EnsemblGene
jalview.ext.ensembl.EnsemblGene
|
0.016326531.6%
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jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
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jalview.controller.AlignViewController
jalview.controller.AlignViewController
|
0.0136518771.4%
|
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jalview.gui.SequenceFetcher
jalview.gui.SequenceFetcher
|
0.0133928571.3%
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jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.0128205131.3%
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jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
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jalview.gui.SeqPanel
jalview.gui.SeqPanel
|
0.0125082291.3%
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jalview.io.SequenceAnnotationReport
jalview.io.SequenceAnnotationReport
|
0.0122699381.2%
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jalview.ws.jws2.RNAalifoldClient
jalview.ws.jws2.RNAalifoldClient
|
0.0114285711.1%
|
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jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
|
0.0103092781%
|
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org.json.simple.JSONArray
org.json.simple.JSONArray
|
0.0080645160.8%
|
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jalview.renderer.seqfeatures.FeatureRenderer
jalview.renderer.seqfeatures.FeatureRenderer
|
0.007547170.8%
|
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com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
|
0.0072463770.7%
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jalview.gui.QuitHandler
jalview.gui.QuitHandler
|
0.00722021660.7%
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jalview.ext.ensembl.EnsemblSeqProxy
jalview.ext.ensembl.EnsemblSeqProxy
|
0.00584795330.6%
|
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|
com.stevesoft.pat.CaseMgr
com.stevesoft.pat.CaseMgr
|
0.00278551530.3%
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