Package	Files	Average Method Complexity	TOTAL Coverage
jalview.util jalview.util	44.0 44	3.5209126 3.52	0.49905154 0.4990515449.9%

Class	Methods	Average Method Complexity	TOTAL Coverage
AWTConsole AWTConsole	7.0 7	4.142857 4.14	0.0 0.00%
ArgParserUtils.BaseInfo ArgParserUtils.BaseInfo	3.0 3	1.3333334 1.33	0.0 0.00%
BrowserLauncher BrowserLauncher	6.0 6	2.3333333 2.33	0.0 0.00%
DBRefUtils.DbRefComp DBRefUtils.DbRefComp	1.0 1	1.0 1	0.0 0.00%
GroupUrlLink GroupUrlLink	24.0 24	4.5416665 4.54	0.0 0.00%
GroupUrlLink.UrlStringTooLongException GroupUrlLink.UrlStringTooLongException	2.0 2	1.0 1	0.0 0.00%
ShortcutKeyMaskExWrapper8 ShortcutKeyMaskExWrapper8	3.0 3	1.6666666 1.67	0.0 0.00%
TableSorter TableSorter	29.0 29	1.7241379 1.72	0.0 0.00%
TableSorter.Arrow TableSorter.Arrow	4.0 4	2.25 2.25	0.0 0.00%
TableSorter.Directive TableSorter.Directive	1.0 1	1.0 1	0.0 0.00%
TableSorter.MouseHandler TableSorter.MouseHandler	1.0 1	4.0 4	0.0 0.00%
TableSorter.Row TableSorter.Row	2.0 2	4.5 4.5	0.0 0.00%
TableSorter.SortableHeaderRenderer TableSorter.SortableHeaderRenderer	2.0 2	1.5 1.5	0.0 0.00%
TableSorter.TableModelHandler TableSorter.TableModelHandler	1.0 1	7.0 7	0.0 0.00%
LaunchUtils LaunchUtils	18.0 18	6.2222223 6.22	0.27941176 0.2794117627.9%
ArrayUtils ArrayUtils	3.0 3	2.6666667 2.67	0.36666667 0.3666666736.7%
StringUtils StringUtils	20.0 20	4.8 4.8	0.37538463 0.3753846337.5%
FileUtils FileUtils	17.0 17	4.0 4	0.39700374 0.3970037439.7%
Platform Platform	36.0 36	2.1666667 2.17	0.41037735 0.4103773541%
ErrorLog ErrorLog	7.0 7	4.0 4	0.4117647 0.411764741.2%
Format Format	22.0 22	6.7727275 6.77	0.4409938 0.440993844.1%
HttpUtils HttpUtils	13.0 13	4.0 4	0.50292397 0.5029239750.3%
ArgParserUtils ArgParserUtils	4.0 4	4.0 4	0.5180723 0.518072351.8%
ColorUtils ColorUtils	10.0 10	4.8 4.8	0.52150536 0.5215053652.2%
ImageMaker ImageMaker	9.0 9	4.6666665 4.67	0.53488374 0.5348837453.5%
Comparison Comparison	19.0 19	4.368421 4.37	0.5511811 0.551181155.1%
DBRefUtils DBRefUtils	21.0 21	7.3333335 7.33	0.570997 0.57099757.1%
Log4j Log4j	24.0 24	1.25 1.25	0.6090909 0.609090960.9%
ShortcutKeyMaskExWrapper ShortcutKeyMaskExWrapper	3.0 3	1.6666666 1.67	0.6111111 0.611111161.1%
ChannelProperties ChannelProperties	13.0 13	2.8461537 2.85	0.6137931 0.613793161.4%
ImageMaker.TYPE ImageMaker.TYPE	4.0 4	1.0 1	0.6363636 0.636363663.6%
MapList MapList	44.0 44	3.7954545 3.8	0.64641744 0.6464174464.6%
CaseInsensitiveString CaseInsensitiveString	4.0 4	2.0 2	0.65217394 0.6521739465.2%
UrlLink UrlLink	26.0 26	3.2692308 3.27	0.6628788 0.662878866.3%
ShortcutKeyMaskExWrapper11 ShortcutKeyMaskExWrapper11	3.0 3	1.6666666 1.67	0.6666667 0.666666766.7%
ShiftList ShiftList	7.0 7	2.7142856 2.71	0.69491524 0.6949152469.5%
MapUtils MapUtils	3.0 3	2.6666667 2.67	0.73913044 0.7391304473.9%
MappingUtils MappingUtils	23.0 23	5.4347825 5.43	0.7768595 0.776859577.7%
UrlConstants UrlConstants	2.0 2	1.0 1	0.8 0.880%
DnaUtils DnaUtils	3.0 3	4.0 4	0.8039216 0.803921680.4%
LinkedIdentityHashSet LinkedIdentityHashSet	8.0 8	1.125 1.12	0.8181818 0.818181881.8%
SparseCount SparseCount	10.0 10	1.8 1.8	0.84 0.8484%
ParseHtmlBodyAndLinks ParseHtmlBodyAndLinks	7.0 7	3.142857 3.14	0.85507244 0.8550724485.5%
UserAgent UserAgent	2.0 2	2.0 2	0.8857143 0.885714388.6%
QuickSort QuickSort	22.0 22	2.5454545 2.55	0.89320385 0.8932038589.3%
MessageManager MessageManager	7.0 7	1.8571428 1.86	0.9047619 0.904761990.5%
JSONUtils JSONUtils	4.0 4	2.0 2	0.90909094 0.9090909490.9%
Constants Constants	3.0 3	1.0 1	1.0 1.0100%
IntRangeComparator IntRangeComparator	2.0 2	1.5 1.5	1.0 1.0100%
LinkedIdentityHashSet.IdentityWrapper LinkedIdentityHashSet.IdentityWrapper	3.0 3	1.0 1	1.0 1.0100%
MathUtils MathUtils	1.0 1	2.0 2	1.0 1.0100%
QuickSort.DoubleComparator QuickSort.DoubleComparator	2.0 2	1.5 1.5	1.0 1.0100%
QuickSort.ExternalComparator QuickSort.ExternalComparator	2.0 2	1.5 1.5	1.0 1.0100%
QuickSort.FloatComparator QuickSort.FloatComparator	2.0 2	1.5 1.5	1.0 1.0100%
QuickSort.IntComparator QuickSort.IntComparator	2.0 2	1.5 1.5	1.0 1.0100%
ReverseListIterator ReverseListIterator	4.0 4	1.0 1	1.0 1.0100%
SetUtils SetUtils	1.0 1	7.0 7	1.0 1.0100%