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Coverage Report

Test testBuildPopupMenu

Test
testBuildPopupMenu 1PASS 18 Nov 09:40:12 0.059
 
testBuildPopupMenu
jalview.io.DataSourceType   jalview.io.DataSourceType 1.0100%
jalview.ws.WSClient   jalview.ws.WSClient 1.0100%
jalview.datamodel.HiddenCursorPosition   jalview.datamodel.HiddenCursorPosition 1.0100%
jalview.datamodel.ResidueCount.SymbolCounts   jalview.datamodel.ResidueCount.SymbolCounts 1.0100%
jalview.datamodel.HiddenColumnsCursor   jalview.datamodel.HiddenColumnsCursor 0.95312595.3%
jalview.jbgui.GAlignmentPanel   jalview.jbgui.GAlignmentPanel 0.9494%
jalview.io.JalviewFileChooser.RecentlyOpened   jalview.io.JalviewFileChooser.RecentlyOpened 0.990%
jalview.gui.SplashScreen.SplashImage   jalview.gui.SplashScreen.SplashImage 0.8823529588.2%
jalview.io.JalviewFileChooser.recentlyOpenedCellRenderer   jalview.io.JalviewFileChooser.recentlyOpenedCellRenderer 0.869565287%
jalview.datamodel.Profiles   jalview.datamodel.Profiles 0.866666786.7%
jalview.json.binding.biojs.BioJSReleasePojo   jalview.json.binding.biojs.BioJSReleasePojo 0.8461538684.6%
jalview.analysis.Conservation   jalview.analysis.Conservation 0.8042959680.4%
jalview.util.UrlConstants   jalview.util.UrlConstants 0.880%
jalview.util.LinkedIdentityHashSet   jalview.util.LinkedIdentityHashSet 0.7727272577.3%
jalview.workers.SecondaryStructureConsensusThread   jalview.workers.SecondaryStructureConsensusThread 0.735294173.5%
jalview.gui.FeatureRenderer   jalview.gui.FeatureRenderer 0.7142857371.4%
jalview.util.LinkedIdentityHashSet.IdentityWrapper   jalview.util.LinkedIdentityHashSet.IdentityWrapper 0.7142857371.4%
jalview.ws.jws2.jabaws2.Jws2InstanceFactory   jalview.ws.jws2.jabaws2.Jws2InstanceFactory 0.770%
jalview.workers.ConsensusThread   jalview.workers.ConsensusThread 0.696969769.7%
jalview.io.JalviewFileFilter   jalview.io.JalviewFileFilter 0.694444469.4%
jalview.json.binding.biojs.BioJSRepositoryPojo   jalview.json.binding.biojs.BioJSRepositoryPojo 0.687568.8%
jalview.ws.SequenceFetcher   jalview.ws.SequenceFetcher 0.678571467.9%
jalview.datamodel.RangeIterator   jalview.datamodel.RangeIterator 0.675675767.6%
jalview.datamodel.Profile   jalview.datamodel.Profile 0.672131167.2%
jalview.ws.jws2.jabaws2.Jws2Instance   jalview.ws.jws2.jabaws2.Jws2Instance 0.586206958.6%
jalview.jbgui.GAlignFrame   jalview.jbgui.GAlignFrame 0.5731370457.3%
jalview.workers.ConservationThread   jalview.workers.ConservationThread 0.5666666656.7%
jalview.gui.SplashScreen   jalview.gui.SplashScreen 0.564935156.5%
jalview.viewmodel.ViewportProperties   jalview.viewmodel.ViewportProperties 0.550%
jalview.schemes.TaylorColourScheme   jalview.schemes.TaylorColourScheme 0.550%
jalview.schemes.FlowerColourScheme   jalview.schemes.FlowerColourScheme 0.550%
jalview.schemes.ZappoColourScheme   jalview.schemes.ZappoColourScheme 0.550%
jalview.schemes.NucleotideAmbiguityColourScheme   jalview.schemes.NucleotideAmbiguityColourScheme 0.550%
jalview.schemes.PurinePyrimidineColourScheme   jalview.schemes.PurinePyrimidineColourScheme 0.550%
jalview.schemes.NucleotideColourScheme   jalview.schemes.NucleotideColourScheme 0.550%
jalview.schemes.BlossomColourScheme   jalview.schemes.BlossomColourScheme 0.550%
jalview.schemes.SunsetColourScheme   jalview.schemes.SunsetColourScheme 0.550%
jalview.schemes.OceanColourScheme   jalview.schemes.OceanColourScheme 0.550%
jalview.io.BioJsHTMLOutput   jalview.io.BioJsHTMLOutput 0.46446.4%
jalview.gui.ColourMenuHelper   jalview.gui.ColourMenuHelper 0.4322033843.2%
jalview.datamodel.ResidueCount   jalview.datamodel.ResidueCount 0.4218181742.2%
jalview.util.ShortcutKeyMaskExWrapper11   jalview.util.ShortcutKeyMaskExWrapper11 0.4166666641.7%
jalview.gui.ScalePanel   jalview.gui.ScalePanel 0.41198541.2%
jalview.io.FileFormats   jalview.io.FileFormats 0.440%
jalview.ws.dbsources.EmblSource   jalview.ws.dbsources.EmblSource 0.440%
jalview.util.SparseCount   jalview.util.SparseCount 0.440%
jalview.schemes.HydrophobicColourScheme   jalview.schemes.HydrophobicColourScheme 0.440%
jalview.schemes.HelixColourScheme   jalview.schemes.HelixColourScheme 0.440%
jalview.schemes.TurnColourScheme   jalview.schemes.TurnColourScheme 0.440%
jalview.schemes.StrandColourScheme   jalview.schemes.StrandColourScheme 0.440%
jalview.schemes.BuriedColourScheme   jalview.schemes.BuriedColourScheme 0.440%
jalview.workers.AlignCalcManager   jalview.workers.AlignCalcManager 0.3928571339.3%
jalview.log.JalviewAppender   jalview.log.JalviewAppender 0.388888938.9%
org.json.simple.parser.Yylex   org.json.simple.parser.Yylex 0.3853503238.5%
jalview.util.MessageManager   jalview.util.MessageManager 0.3571428735.7%
jalview.schemes.ResidueColourScheme   jalview.schemes.ResidueColourScheme 0.3571428735.7%
jalview.io.AlignFile   jalview.io.AlignFile 0.356164435.6%
jalview.io.FileLoader   jalview.io.FileLoader 0.3511705735.1%
jalview.gui.PaintRefresher   jalview.gui.PaintRefresher 0.3239436732.4%
jalview.analysis.AAFrequency   jalview.analysis.AAFrequency 0.3217213232.2%
jalview.io.FastaFile   jalview.io.FastaFile 0.315315331.5%
jalview.ws.rest.RestServiceDescription   jalview.ws.rest.RestServiceDescription 0.31531.5%
jalview.ws.jws1.Discoverer   jalview.ws.jws1.Discoverer 0.3141025631.4%
jalview.viewmodel.ViewportRanges   jalview.viewmodel.ViewportRanges 0.3135313431.4%
jalview.util.Comparison   jalview.util.Comparison 0.3110236231.1%
jalview.viewmodel.styles.ViewStyle   jalview.viewmodel.styles.ViewStyle 0.30797130.8%
jalview.gui.AlignmentPanel   jalview.gui.AlignmentPanel 0.3003533530%
jalview.datamodel.ColumnSelection.IntList   jalview.datamodel.ColumnSelection.IntList 0.299065429.9%
org.json.simple.parser.JSONParser   org.json.simple.parser.JSONParser 0.2945544429.5%
jalview.ws.dbsources.EmblCdsSource   jalview.ws.dbsources.EmblCdsSource 0.285714328.6%
ext.vamsas.ServiceHandle   ext.vamsas.ServiceHandle 0.285714328.6%
jalview.schemes.JalviewColourScheme   jalview.schemes.JalviewColourScheme 0.285714328.6%
jalview.io.IdentifyFile   jalview.io.IdentifyFile 0.279365127.9%
jalview.gui.AlignViewport   jalview.gui.AlignViewport 0.2682403326.8%
jalview.gui.JalviewChangeSupport   jalview.gui.JalviewChangeSupport 0.2525%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.2452830224.5%
jalview.viewmodel.AlignmentViewport   jalview.viewmodel.AlignmentViewport 0.245056524.5%
jalview.ws.rest.params.Alignment   jalview.ws.rest.params.Alignment 0.2435897424.4%
jalview.gui.JvSwingUtils   jalview.gui.JvSwingUtils 0.2312925223.1%
jalview.ws.jws2.JabaPreset   jalview.ws.jws2.JabaPreset 0.2272727322.7%
jalview.ext.android.SparseShortArray   jalview.ext.android.SparseShortArray 0.225988722.6%
jalview.ws.jws2.JabaWsServerQuery   jalview.ws.jws2.JabaWsServerQuery 0.2083333320.8%
jalview.ws.rest.InputType   jalview.ws.rest.InputType 0.2056074720.6%
jalview.io.JalviewFileChooser   jalview.io.JalviewFileChooser 0.1743869217.4%
jalview.schemes.IdColourScheme   jalview.schemes.IdColourScheme 0.1739130517.4%
jalview.analysis.AnnotationSorter   jalview.analysis.AnnotationSorter 0.1674876816.7%
jalview.io.FileParse   jalview.io.FileParse 0.164345416.4%
jalview.analysis.scoremodels.ScoreModels   jalview.analysis.scoremodels.ScoreModels 0.1636363616.4%
jalview.ws.jws1.WS1Client   jalview.ws.jws1.WS1Client 0.1616%
jalview.util.Format   jalview.util.Format 0.1490683314.9%
jalview.schemes.TCoffeeColourScheme   jalview.schemes.TCoffeeColourScheme 0.1475409914.8%
jalview.log.JLogger   jalview.log.JLogger 0.1428571514.3%
jalview.gui.Desktop.MyDesktopPane   jalview.gui.Desktop.MyDesktopPane 0.1428571514.3%
jalview.ws.jws2.JabaParamStore   jalview.ws.jws2.JabaParamStore 0.14062514.1%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.1289424912.9%
jalview.ws.rest.params.SeqGroupIndexVector   jalview.ws.rest.params.SeqGroupIndexVector 0.12408759412.4%
jalview.util.Platform   jalview.util.Platform 0.1226415112.3%
jalview.renderer.ResidueShader   jalview.renderer.ResidueShader 0.1219512212.2%
jalview.io.FormatAdapter   jalview.io.FormatAdapter 0.1212%
jalview.util.StringUtils   jalview.util.StringUtils 0.1212%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.1180189711.8%
jalview.schemes.Blosum62ColourScheme   jalview.schemes.Blosum62ColourScheme 0.1176470611.8%
jalview.ws.rest.RestClient   jalview.ws.rest.RestClient 0.11538461611.5%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.11428571511.4%
jalview.datamodel.ColumnSelection   jalview.datamodel.ColumnSelection 0.1134020611.3%
jalview.gui.Desktop.MyDesktopManager   jalview.gui.Desktop.MyDesktopManager 0.1111111111.1%
jalview.ext.android.ContainerHelpers   jalview.ext.android.ContainerHelpers 0.1111111111.1%
jalview.util.ShortcutKeyMaskExWrapper   jalview.util.ShortcutKeyMaskExWrapper 0.1111111111.1%
jalview.schemes.ColourSchemeProperty   jalview.schemes.ColourSchemeProperty 0.1111111111.1%
jalview.io.FileFormat   jalview.io.FileFormat 0.1085271310.9%
jalview.log.JLoggerLog4j   jalview.log.JLoggerLog4j 0.10679611610.7%
jalview.ws.rest.params.AnnotationFile   jalview.ws.rest.params.AnnotationFile 0.10256410410.3%
jalview.io.AppletFormatAdapter   jalview.io.AppletFormatAdapter 0.0993788849.9%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.0977508659.8%
org.json.simple.parser.Yytoken   org.json.simple.parser.Yytoken 0.096774199.7%
jalview.util.ColorUtils   jalview.util.ColorUtils 0.096774199.7%
jalview.util.ChannelProperties   jalview.util.ChannelProperties 0.0965517249.7%
jalview.datamodel.SequenceGroup   jalview.datamodel.SequenceGroup 0.095505629.6%
jalview.workers.AlignCalcWorker   jalview.workers.AlignCalcWorker 0.09523819.5%
jalview.util.JSONUtils   jalview.util.JSONUtils 0.090909099.1%
jalview.gui.Desktop   jalview.gui.Desktop 0.087699328.8%
jalview.ws.dbsources.Xfam   jalview.ws.dbsources.Xfam 0.086956528.7%
jalview.ext.ensembl.EnsemblSequenceFetcher   jalview.ext.ensembl.EnsemblSequenceFetcher 0.0833333368.3%
jalview.gui.Console   jalview.gui.Console 0.082568818.3%
jalview.schemes.RNAHelicesColour   jalview.schemes.RNAHelicesColour 0.082191788.2%
jalview.gui.ProgressBar   jalview.gui.ProgressBar 0.081300818.1%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.079601998%
jalview.urls.UrlProvider   jalview.urls.UrlProvider 0.079207927.9%
jalview.schemes.ColourSchemes   jalview.schemes.ColourSchemes 0.070175447%
jalview.analysis.scoremodels.ScoreMatrix   jalview.analysis.scoremodels.ScoreMatrix 0.069958857%
jalview.bin.Console   jalview.bin.Console 0.068965526.9%
jalview.gui.IdPanel   jalview.gui.IdPanel 0.067264576.7%
jalview.schemes.PIDColourScheme   jalview.schemes.PIDColourScheme 0.066666676.7%
jalview.gui.IdwidthAdjuster   jalview.gui.IdwidthAdjuster 0.0657894766.6%
jalview.analysis.CrossRef   jalview.analysis.CrossRef 0.063524596.4%
jalview.gui.ViewSelectionMenu   jalview.gui.ViewSelectionMenu 0.059405945.9%
jalview.ws.seqfetcher.ASequenceFetcher   jalview.ws.seqfetcher.ASequenceFetcher 0.0577777775.8%
jalview.urls.CustomUrlProvider   jalview.urls.CustomUrlProvider 0.0569620245.7%
jalview.ws.seqfetcher.DbSourceProxyImpl   jalview.ws.seqfetcher.DbSourceProxyImpl 0.0540540555.4%
jalview.gui.IdCanvas   jalview.gui.IdCanvas 0.052631585.3%
jalview.structure.StructureSelectionManager   jalview.structure.StructureSelectionManager 0.050909095.1%
jalview.gui.AnnotationPanel   jalview.gui.AnnotationPanel 0.050420175%
jalview.analysis.GeneticCodes   jalview.analysis.GeneticCodes 0.0496894425%
jalview.datamodel.SecondaryStructureCount   jalview.datamodel.SecondaryStructureCount 0.0468754.7%
jalview.util.DBRefUtils   jalview.util.DBRefUtils 0.045317224.5%
jalview.gui.WsParamSetManager   jalview.gui.WsParamSetManager 0.0429447854.3%
jalview.ws.jws2.Jws2Discoverer   jalview.ws.jws2.Jws2Discoverer 0.041584164.2%
jalview.bin.Cache   jalview.bin.Cache 0.0413223134.1%
jalview.util.UrlLink   jalview.util.UrlLink 0.037878793.8%
org.json.simple.JSONObject   org.json.simple.JSONObject 0.037735853.8%
jalview.urls.IdentifiersUrlProvider   jalview.urls.IdentifiersUrlProvider 0.0366972463.7%
jalview.ws.dbsources.Pdb   jalview.ws.dbsources.Pdb 0.0363636353.6%
jalview.gui.SeqPanel   jalview.gui.SeqPanel 0.0322580643.2%
jalview.ws.jws1.JPredClient   jalview.ws.jws1.JPredClient 0.0310559013.1%
jalview.gui.SeqCanvas   jalview.gui.SeqCanvas 0.0270541092.7%
jalview.renderer.ResidueColourFinder   jalview.renderer.ResidueColourFinder 0.0238095242.4%
jalview.schemes.ClustalxColourScheme   jalview.schemes.ClustalxColourScheme 0.0169491531.7%
jalview.analysis.AlignmentUtils   jalview.analysis.AlignmentUtils 0.016414971.6%
jalview.ws.dbsources.Uniprot   jalview.ws.dbsources.Uniprot 0.0155642021.6%
jalview.gui.SequenceRenderer   jalview.gui.SequenceRenderer 0.0144230771.4%
jalview.controller.AlignViewController   jalview.controller.AlignViewController 0.0136518771.4%
jalview.datamodel.SearchResults   jalview.datamodel.SearchResults 0.0128205131.3%
jalview.analysis.AlignSeq   jalview.analysis.AlignSeq 0.0128205131.3%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.0127388541.3%
jalview.io.SequenceAnnotationReport   jalview.io.SequenceAnnotationReport 0.0122699381.2%
jalview.gui.AnnotationLabels   jalview.gui.AnnotationLabels 0.0110497241.1%
jalview.datamodel.HiddenSequences   jalview.datamodel.HiddenSequences 0.009132420.9%
jalview.gui.SequenceFetcher   jalview.gui.SequenceFetcher 0.0089285720.9%
jalview.ext.ensembl.EnsemblGene   jalview.ext.ensembl.EnsemblGene 0.0081632650.8%
jalview.bin.Jalview   jalview.bin.Jalview 0.0081227440.8%
org.json.simple.JSONArray   org.json.simple.JSONArray 0.0080645160.8%
jalview.renderer.seqfeatures.FeatureRenderer   jalview.renderer.seqfeatures.FeatureRenderer 0.007547170.8%
jalview.gui.QuitHandler   jalview.gui.QuitHandler 0.00722021660.7%
jalview.util.HttpUtils   jalview.util.HttpUtils 0.00584795330.6%
jalview.renderer.AnnotationRenderer   jalview.renderer.AnnotationRenderer 0.00357142860.4%