Class | Line # | Actions | ||||
---|---|---|---|---|---|---|
SequencePoint | 29 | 2 | 1 | 3 |
1 | /* | |
2 | * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) | |
3 | * Copyright (C) $$Year-Rel$$ The Jalview Authors | |
4 | * | |
5 | * This file is part of Jalview. | |
6 | * | |
7 | * Jalview is free software: you can redistribute it and/or | |
8 | * modify it under the terms of the GNU General Public License | |
9 | * as published by the Free Software Foundation, either version 3 | |
10 | * of the License, or (at your option) any later version. | |
11 | * | |
12 | * Jalview is distributed in the hope that it will be useful, but | |
13 | * WITHOUT ANY WARRANTY; without even the implied warranty | |
14 | * of MERCHANTABILITY or FITNESS FOR A PARTICULAR | |
15 | * PURPOSE. See the GNU General Public License for more details. | |
16 | * | |
17 | * You should have received a copy of the GNU General Public License | |
18 | * along with Jalview. If not, see <http://www.gnu.org/licenses/>. | |
19 | * The Jalview Authors are detailed in the 'AUTHORS' file. | |
20 | */ | |
21 | package jalview.datamodel; | |
22 | ||
23 | /** | |
24 | * DOCUMENT ME! | |
25 | * | |
26 | * @author $author$ | |
27 | * @version $Revision$ | |
28 | */ | |
29 | public class SequencePoint | |
30 | { | |
31 | // SMJS PUBLIC | |
32 | /** | |
33 | * for points with no real physical association with an alignment sequence | |
34 | */ | |
35 | public boolean isPlaceholder = false; | |
36 | ||
37 | /** | |
38 | * Associated alignment sequence, or dummy sequence object. | |
39 | */ | |
40 | public SequenceI sequence; | |
41 | ||
42 | /** | |
43 | * array of coordinates in embedded sequence space. | |
44 | */ | |
45 | public float[] coord; | |
46 | ||
47 | // SMJS ENDPUBLIC | |
48 | 0 | public SequencePoint(SequenceI sequence, float[] coord) |
49 | { | |
50 | 0 | this.sequence = sequence; |
51 | 0 | this.coord = coord; |
52 | } | |
53 | } |