Classes

Class	Line #	Total Statements	Complexity	Uncovered Elements	TOTAL Coverage	Actions
SequencePoint	29	2	1	3	0.00%	Show methods

Class SequencePoint

Class SequencePoint	Line # 29	Total Statements 2	Complexity 1	Uncovered Elements 3	TOTAL Coverage 0.00%
SequencePoint(SequenceI,float[])   SequencePoint(SequenceI,float[])	4848	2.02	1.01	2.02	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.datamodel;
22
23		/**
24		* DOCUMENT ME!
25		*
26		* @author $author$
27		* @version $Revision$
28		*/
		0% Uncovered Elements: 3 (3) Complexity: 1 Complexity Density: 0.5
29		public class SequencePoint
30		{
31		// SMJS PUBLIC
32		/**
33		* for points with no real physical association with an alignment sequence
34		*/
35		public boolean isPlaceholder = false;
36
37		/**
38		* Associated alignment sequence, or dummy sequence object.
39		*/
40		public SequenceI sequence;
41
42		/**
43		* array of coordinates in embedded sequence space.
44		*/
45		public float[] coord;
46
47		// SMJS ENDPUBLIC
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
48	0	public SequencePoint(SequenceI sequence, float[] coord)...
49		{
50	0	this.sequence = sequence;
51	0	this.coord = coord;
52		}
53		}