|
0.8372093
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.7790698
|
jalview.io.StockholmFileTest.stockholmFileRnaSSAlphaCharsjalview.io.StockholmFileTest.stockholmFileRnaSSAlphaChars
|
1PASS
|
|
|
0.7790698
|
jalview.io.StockholmFileTest.dbrefOutputjalview.io.StockholmFileTest.dbrefOutput
|
1PASS
|
|
|
0.7790698
|
jalview.project.Jalview2xmlTests.testRNAStructureRecoveryjalview.project.Jalview2xmlTests.testRNAStructureRecovery
|
1PASS
|
|
|
0.7790698
|
jalview.io.StockholmFileTest.descriptionLineOutputjalview.io.StockholmFileTest.descriptionLineOutput
|
1PASS
|
|
|
0.7790698
|
jalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequence
|
1PASS
|
|
|
0.7790698
|
jalview.io.StockholmFileTest.rfamFileIOjalview.io.StockholmFileTest.rfamFileIO
|
1PASS
|
|
|
0.7790698
|
jalview.io.StockholmFileTest.pfamFileDataExtractionjalview.io.StockholmFileTest.pfamFileDataExtraction
|
1PASS
|
|
|
0.7790698
|
jalview.io.StockholmFileTest.pfamFileIOjalview.io.StockholmFileTest.pfamFileIO
|
1PASS
|
|
|
0.7790698
|
jalview.io.RNAMLfileTest.testRnamlToStockholmIOjalview.io.RNAMLfileTest.testRnamlToStockholmIO
|
1PASS
|
|
|
0.7790698
|
jalview.io.StockholmFileTest.secondaryStructureForRNASequencejalview.io.StockholmFileTest.secondaryStructureForRNASequence
|
1PASS
|
|
|
0.7790698
|
jalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequence
|
1PASS
|
|
|
0.75581396
|
jalview.util.DBRefUtilsTest.testParseToDbRef_PDBjalview.util.DBRefUtilsTest.testParseToDbRef_PDB
|
1PASS
|
|
|
0.6511628
|
jalview.util.UrlLinkTest.testMakeUrlWithRegexjalview.util.UrlLinkTest.testMakeUrlWithRegex
|
1PASS
|
|
|
0.6511628
|
jalview.util.UrlLinkTest.testUrlLinkCreationWithRegexjalview.util.UrlLinkTest.testUrlLinkCreationWithRegex
|
1PASS
|
|
|
0.61627907
|
jalview.io.RNAMLfileTest.testRnamlSeqImportjalview.io.RNAMLfileTest.testRnamlSeqImport
|
1PASS
|
|
|
0.61627907
|
jalview.io.NewickFileTests.testTreeIOjalview.io.NewickFileTests.testTreeIO
|
1PASS
|
|
|
0.61627907
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.61627907
|
jalview.io.NewickFileTests.testTreeIOjalview.io.NewickFileTests.testTreeIO
|
1PASS
|
|
|
0.61627907
|
jalview.project.Jalview2xmlTests.gatherViewsHerejalview.project.Jalview2xmlTests.gatherViewsHere
|
1PASS
|
|
|
0.61627907
|
jalview.project.Jalview2xmlTests.testCopyViewSettingsjalview.project.Jalview2xmlTests.testCopyViewSettings
|
1PASS
|
|
|
0.61627907
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettingsjalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettings
|
1PASS
|
|
|
0.61627907
|
jalview.project.Jalview2xmlTests.testAutoShowOverviewForLegacyProjectsjalview.project.Jalview2xmlTests.testAutoShowOverviewForLegacyProjects
|
1PASS
|
|
|
0.61627907
|
jalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMadejalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMade
|
1PASS
|
|
|
0.61627907
|
jalview.project.Jalview2xmlTests.viewRefPdbAnnotationjalview.project.Jalview2xmlTests.viewRefPdbAnnotation
|
1PASS
|
|
|
0.61627907
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviewsjalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviews
|
1PASS
|
|
|
0.61627907
|
jalview.project.Jalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeightjalview.project.Jalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeight
|
1PASS
|
|
|
0.61627907
|
jalview.io.NewickFileTests.testTreeIOjalview.io.NewickFileTests.testTreeIO
|
1PASS
|
|
|
0.59302324
|
jalview.project.Jalview2xmlTests.testPAEsaveRestorejalview.project.Jalview2xmlTests.testPAEsaveRestore
|
1PASS
|
|
|
0.59302324
|
jalview.analysis.AverageDistanceEngineTest.testUPGMAEnginejalview.analysis.AverageDistanceEngineTest.testUPGMAEngine
|
1PASS
|
|
|
0.59302324
|
jalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_wordBoundariesjalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_wordBoundaries
|
1PASS
|
|
|
0.59302324
|
jalview.datamodel.PAEContactMatrixTest.testSeqAssociatedPAEMatrixjalview.datamodel.PAEContactMatrixTest.testSeqAssociatedPAEMatrix
|
1PASS
|
|
|
0.5232558
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.5232558
|
jalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotationjalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotation
|
1PASS
|
|
|
0.5232558
|
jalview.gui.AnnotationLabelsTest2.testIdWidthNoChangesjalview.gui.AnnotationLabelsTest2.testIdWidthNoChanges
|
1PASS
|
|
|
0.5232558
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.5232558
|
mc_view.PDBfileTest.testParse_withJmol_noAnnotationsmc_view.PDBfileTest.testParse_withJmol_noAnnotations
|
1PASS
|
|
|
0.5232558
|
jalview.analysis.ParsePropertiesTest.testGetScoresFromDescriptionjalview.analysis.ParsePropertiesTest.testGetScoresFromDescription
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.5232558
|
jalview.ext.jmol.JmolParserTest.testLocalPDBIdjalview.ext.jmol.JmolParserTest.testLocalPDBId
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMol
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeaturesjalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeatures
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.gui.AssociatePDBFileTest.testAssociatePDBFilejalview.gui.AssociatePDBFileTest.testAssociatePDBFile
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.gui.AnnotationLabelsTest2.testIdWidthChangesjalview.gui.AnnotationLabelsTest2.testIdWidthChanges
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.gui.AnnotationLabelsTest2.testIdWidthNoChangesjalview.gui.AnnotationLabelsTest2.testIdWidthNoChanges
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.ext.jmol.JmolParserTest.testParse_alternativeResiduesjalview.ext.jmol.JmolParserTest.testParse_alternativeResidues
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.ext.jmol.JmolParserTest.testFileParserjalview.ext.jmol.JmolParserTest.testFileParser
|
1PASS
|
|
|
0.5232558
|
jalview.ext.jmol.JmolParserTest.testAlignmentLoaderjalview.ext.jmol.JmolParserTest.testAlignmentLoader
|
1PASS
|
|
|
0.5232558
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMol
|
1PASS
|
|
|
0.5232558
|
jalview.gui.AnnotationLabelsTest2.testIdWidthChangesjalview.gui.AnnotationLabelsTest2.testIdWidthChanges
|
1PASS
|
|
|
0.5232558
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntryjalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntry
|
1PASS
|
|
|
0.5232558
|
jalview.ext.jmol.JmolParserTest.testParse_missingResiduesjalview.ext.jmol.JmolParserTest.testParse_missingResidues
|
1PASS
|
|
|
0.5232558
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.5232558
|
jalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappingsjalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappings
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_twoScoresjalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_twoScores
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.5232558
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
1PASS
|
|
|
0.5232558
|
mc_view.PDBfileTest.testParse_withJmolAddAlignmentAnnotationsmc_view.PDBfileTest.testParse_withJmolAddAlignmentAnnotations
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_findNextjalview.analysis.FinderTest.testFind_findNext
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFindNextjalview.analysis.FinderTest.testFindNext
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFindAll_maximalResultOnlyjalview.analysis.FinderTest.testFindAll_maximalResultOnly
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_withHiddenColumnsAndSelectionjalview.analysis.FinderTest.testFind_withHiddenColumnsAndSelection
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_findAlljalview.analysis.FinderTest.testFind_findAll
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFindNext_inSelectionjalview.analysis.FinderTest.testFindNext_inSelection
|
1PASS
|
|
|
0.5
|
jalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlightjalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlight
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFindAll_inSelectionjalview.analysis.FinderTest.testFindAll_inSelection
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_ignoreHiddenColumnsjalview.analysis.FinderTest.testFind_ignoreHiddenColumns
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_featuresOnlyjalview.analysis.FinderTest.testFind_featuresOnly
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFindAlljalview.analysis.FinderTest.testFindAll
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_inDescriptionjalview.analysis.FinderTest.testFind_inDescription
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFindAll_caseSensitivejalview.analysis.FinderTest.testFindAll_caseSensitive
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_findAllInSelectionWithShortSequencejalview.analysis.FinderTest.testFind_findAllInSelectionWithShortSequence
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFindAll_sequenceIdsjalview.analysis.FinderTest.testFindAll_sequenceIds
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_withHiddenColumnsjalview.analysis.FinderTest.testFind_withHiddenColumns
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_residueNumberjalview.analysis.FinderTest.testFind_residueNumber
|
1PASS
|
|
|
0.5
|
jalview.analysis.FinderTest.testFind_regexjalview.analysis.FinderTest.testFind_regex
|
1PASS
|
|