Classes

Class	Line #	Total Statements	Complexity	Uncovered Elements	TOTAL Coverage	Actions
AccessionMapperServiceLocator	25	39	23	65	0.00%	Show methods

Class AccessionMapperServiceLocator

Class AccessionMapperServiceLocator	Line # 25	Total Statements 39	Complexity 23	Uncovered Elements 65	TOTAL Coverage 0.00%
AccessionMapperServiceLocator()   AccessionMapperServiceLocator()	3030	0.00	1.01	0.00	-1.0 -1.0 -
AccessionMapperServiceLocator(org.apache.axis.EngineConfiguration)   AccessionMapperServiceLocator(org.apache.axis.EngineConfiguration)	3434	1.01	1.01	1.01	0.0 0.00%
getAccessionMapperPortAddress() : java.lang.String   getAccessionMapperPortAddress() : java.lang.String	4343	1.01	1.01	1.01	0.0 0.00%
getAccessionMapperPortWSDDServiceName() : java.lang.String   getAccessionMapperPortWSDDServiceName() : java.lang.String	5151	1.01	1.01	1.01	0.0 0.00%
setAccessionMapperPortWSDDServiceName(java.lang.String) : void   setAccessionMapperPortWSDDServiceName(java.lang.String) : void	5656	1.01	1.01	1.01	0.0 0.00%
getAccessionMapperPort() : uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface   getAccessionMapperPort() : uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface	6161	5.05	2.02	5.05	0.0 0.00%
getAccessionMapperPort(java.net.URL) : uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface   getAccessionMapperPort(java.net.URL) : uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface	7575	5.05	2.02	5.05	0.0 0.00%
setAccessionMapperPortEndpointAddress(java.lang.String) : void   setAccessionMapperPortEndpointAddress(java.lang.String) : void	9090	1.01	1.01	1.01	0.0 0.00%
getPort(Class) : java.rmi.Remote   getPort(Class) : java.rmi.Remote	9999	7.07	4.04	11.011	0.0 0.00%
getPort(javax.xml.namespace.QName,Class) : java.rmi.Remote   getPort(javax.xml.namespace.QName,Class) : java.rmi.Remote	126126	8.08	3.03	12.012	0.0 0.00%
getServiceName() : javax.xml.namespace.QName   getServiceName() : javax.xml.namespace.QName	147147	1.01	1.01	1.01	0.0 0.00%
getPorts() : java.util.Iterator   getPorts() : java.util.Iterator	156156	4.04	2.02	6.06	0.0 0.00%
setEndpointAddress(java.lang.String,java.lang.String) : void   setEndpointAddress(java.lang.String,java.lang.String) : void	171171	3.03	2.02	5.05	0.0 0.00%
setEndpointAddress(javax.xml.namespace.QName,java.lang.String) : void   setEndpointAddress(javax.xml.namespace.QName,java.lang.String) : void	190190	1.01	1.01	1.01	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package uk.ac.ebi.www.picr.AccessionMappingService;
22
23		import jalview.util.MessageManager;
24
		0% Uncovered Elements: 65 (65) Complexity: 23 Complexity Density: 0.59
25		public class AccessionMapperServiceLocator extends
26		org.apache.axis.client.Service implements
27		uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperService
28		{
29
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
30	0	public AccessionMapperServiceLocator()...
31		{
32		}
33
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
34	0	public AccessionMapperServiceLocator(...
35		org.apache.axis.EngineConfiguration config)
36		{
37	0	super(config);
38		}
39
40		// Use to get a proxy class for AccessionMapperPort
41		private java.lang.String AccessionMapperPort_address = "http://www.ebi.ac.uk:80/Tools/picr/service";
42
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
43	0	public java.lang.String getAccessionMapperPortAddress()...
44		{
45	0	return AccessionMapperPort_address;
46		}
47
48		// The WSDD service name defaults to the port name.
49		private java.lang.String AccessionMapperPortWSDDServiceName = "AccessionMapperPort";
50
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
51	0	public java.lang.String getAccessionMapperPortWSDDServiceName()...
52		{
53	0	return AccessionMapperPortWSDDServiceName;
54		}
55
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
56	0	public void setAccessionMapperPortWSDDServiceName(java.lang.String name)...
57		{
58	0	AccessionMapperPortWSDDServiceName = name;
59		}
60
		0% Uncovered Elements: 5 (5) Complexity: 2 Complexity Density: 0.4
61	0	public uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface getAccessionMapperPort()...
62		throws javax.xml.rpc.ServiceException
63		{
64	0	java.net.URL endpoint;
65	0	try
66		{
67	0	endpoint = new java.net.URL(AccessionMapperPort_address);
68		} catch (java.net.MalformedURLException e)
69		{
70	0	throw new javax.xml.rpc.ServiceException(e);
71		}
72	0	return getAccessionMapperPort(endpoint);
73		}
74
		0% Uncovered Elements: 5 (5) Complexity: 2 Complexity Density: 0.4
75	0	public uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface getAccessionMapperPort(...
76		java.net.URL portAddress) throws javax.xml.rpc.ServiceException
77		{
78	0	try
79		{
80	0	uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperBindingStub _stub = new uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperBindingStub(
81		portAddress, this);
82	0	_stub.setPortName(getAccessionMapperPortWSDDServiceName());
83	0	return _stub;
84		} catch (org.apache.axis.AxisFault e)
85		{
86	0	return null;
87		}
88		}
89
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
90	0	public void setAccessionMapperPortEndpointAddress(java.lang.String address)...
91		{
92	0	AccessionMapperPort_address = address;
93		}
94
95		/**
96		* For the given interface, get the stub implementation. If this service has
97		* no port for the given interface, then ServiceException is thrown.
98		*/
		0% Uncovered Elements: 11 (11) Complexity: 4 Complexity Density: 0.57
99	0	public java.rmi.Remote getPort(Class serviceEndpointInterface)...
100		throws javax.xml.rpc.ServiceException
101		{
102	0	try
103		{
104	0	if (uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface.class
105		.isAssignableFrom(serviceEndpointInterface))
106		{
107	0	uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperBindingStub _stub = new uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperBindingStub(
108		new java.net.URL(AccessionMapperPort_address), this);
109	0	_stub.setPortName(getAccessionMapperPortWSDDServiceName());
110	0	return _stub;
111		}
112		} catch (java.lang.Throwable t)
113		{
114	0	throw new javax.xml.rpc.ServiceException(t);
115		}
116	0	throw new javax.xml.rpc.ServiceException(MessageManager.formatMessage(
117		"exception.no_stub_implementation_for_interface",
118	0	new String[] { (serviceEndpointInterface == null ? "null"
119		: serviceEndpointInterface.getName()) }));
120		}
121
122		/**
123		* For the given interface, get the stub implementation. If this service has
124		* no port for the given interface, then ServiceException is thrown.
125		*/
		0% Uncovered Elements: 12 (12) Complexity: 3 Complexity Density: 0.38
126	0	public java.rmi.Remote getPort(javax.xml.namespace.QName portName,...
127		Class serviceEndpointInterface)
128		throws javax.xml.rpc.ServiceException
129		{
130	0	if (portName == null)
131		{
132	0	return getPort(serviceEndpointInterface);
133		}
134	0	java.lang.String inputPortName = portName.getLocalPart();
135	0	if ("AccessionMapperPort".equals(inputPortName))
136		{
137	0	return getAccessionMapperPort();
138		}
139		else
140		{
141	0	java.rmi.Remote _stub = getPort(serviceEndpointInterface);
142	0	((org.apache.axis.client.Stub) _stub).setPortName(portName);
143	0	return _stub;
144		}
145		}
146
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
147	0	public javax.xml.namespace.QName getServiceName()...
148		{
149	0	return new javax.xml.namespace.QName(
150		"http://www.ebi.ac.uk/picr/AccessionMappingService",
151		"AccessionMapperService");
152		}
153
154		private java.util.HashSet ports = null;
155
		0% Uncovered Elements: 6 (6) Complexity: 2 Complexity Density: 0.5
156	0	public java.util.Iterator getPorts()...
157		{
158	0	if (ports == null)
159		{
160	0	ports = new java.util.HashSet();
161	0	ports.add(new javax.xml.namespace.QName(
162		"http://www.ebi.ac.uk/picr/AccessionMappingService",
163		"AccessionMapperPort"));
164		}
165	0	return ports.iterator();
166		}
167
168		/**
169		* Set the endpoint address for the specified port name.
170		*/
		0% Uncovered Elements: 5 (5) Complexity: 2 Complexity Density: 0.67
171	0	public void setEndpointAddress(java.lang.String portName,...
172		java.lang.String address) throws javax.xml.rpc.ServiceException
173		{
174	0	if ("AccessionMapperPort".equals(portName))
175		{
176	0	setAccessionMapperPortEndpointAddress(address);
177		}
178		else
179		{ // Unknown Port Name
180	0	throw new javax.xml.rpc.ServiceException(
181		MessageManager.formatMessage(
182		"exception.cannot_set_endpoint_address_unknown_port",
183		new String[] { portName }));
184		}
185		}
186
187		/**
188		* Set the endpoint address for the specified port name.
189		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
190	0	public void setEndpointAddress(javax.xml.namespace.QName portName,...
191		java.lang.String address) throws javax.xml.rpc.ServiceException
192		{
193	0	setEndpointAddress(portName.getLocalPart(), address);
194		}
195
196		}