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jalviewX

  1. Project Clover database Wed Oct 31 2018 15:13:58 GMT
  2. Package mc_view

File ResidueTest.java

 

Code metrics

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0.1
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Classes

Class Line # Actions
ResidueTest 33 20 2 0
1.0100%
 

Contributing tests

This file is covered by 1 test. .

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1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package mc_view;
22   
23    import static org.testng.AssertJUnit.assertNull;
24    import static org.testng.AssertJUnit.assertSame;
25   
26    import jalview.gui.JvOptionPane;
27   
28    import java.util.Vector;
29   
30    import org.testng.annotations.BeforeClass;
31    import org.testng.annotations.Test;
32   
 
33    public class ResidueTest
34    {
35   
 
36  1 toggle @BeforeClass(alwaysRun = true)
37    public void setUpJvOptionPane()
38    {
39  1 JvOptionPane.setInteractiveMode(false);
40  1 JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
41    }
42   
 
43  1 toggle @Test(groups = { "Functional" })
44    public void testFindAtom()
45    {
46  1 Atom a1 = new Atom(1f, 2f, 3f);
47  1 a1.name = "C";
48  1 Atom a2 = new Atom(1f, 2f, 3f);
49  1 a2.name = "A";
50  1 Atom a3 = new Atom(1f, 2f, 3f);
51  1 a3.name = "P";
52  1 Atom a4 = new Atom(1f, 2f, 3f);
53  1 a4.name = "C";
54  1 Vector<Atom> v = new Vector<Atom>();
55  1 v.add(a1);
56  1 v.add(a2);
57  1 v.add(a3);
58  1 v.add(a4);
59  1 Residue r = new Residue(v, 293, 12);
60   
61  1 assertSame(a1, r.findAtom("C"));
62  1 assertSame(a2, r.findAtom("A"));
63  1 assertSame(a3, r.findAtom("P"));
64  1 assertNull(r.findAtom("S"));
65    }
66    }