Classes

Class	Line #	Total Statements	Complexity	Uncovered Elements	TOTAL Coverage	Actions
UniprotSequence	28	7	5	1	0.9333333493.3%	Show methods

Class UniprotSequence

Class UniprotSequence	Line # 28	Total Statements 7	Complexity 5	Uncovered Elements 1	TOTAL Coverage 0.9333333493.3%
setContent(String) : void   setContent(String) : void	3737	6.06	4.04	1.01	0.9166667 0.916666791.7%
getContent() : String   getContent() : String	5353	1.01	1.01	0.00	1.0 1.0100%

 

Contributing tests

Contributing tests

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	Test contribution	Test	Result	Actions
	0.93333334	jalview.ws.dbsources.UniprotTest.testGetUniprotEntryDescriptionjalview.ws.dbsources.UniprotTest.testGetUniprotEntryDescription	1PASS
	0.93333334	jalview.ws.dbsources.UniprotTest.testGetUniprotEntryIdjalview.ws.dbsources.UniprotTest.testGetUniprotEntryId	1PASS
	0.93333334	jalview.ws.dbsources.UniprotTest.testGetUniprotSequencejalview.ws.dbsources.UniprotTest.testGetUniprotSequence	1PASS
	0.93333334	jalview.ws.dbsources.UniprotTest.testGetUniprotEntriesjalview.ws.dbsources.UniprotTest.testGetUniprotEntries	1PASS

 

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.datamodel.xdb.uniprot;
22
23		/**
24		* Data model for the sequence returned by a Uniprot query
25		*
26		* @see uniprot_mapping.xml
27		*/
		93.3% Uncovered Elements: 1 (15) Complexity: 5 Complexity Density: 0.71
28		public class UniprotSequence
29		{
30		private String _content = "";
31
32		/**
33		* Sets the content string, omitting any space characters
34		*
35		* @param seq
36		*/
		91.7% Uncovered Elements: 1 (12) Complexity: 4 Complexity Density: 0.67
37	4	public void setContent(String seq)...
38		{
39	4	if (seq != null)
40		{
41	4	StringBuilder sb = new StringBuilder(seq.length());
42	48	for (int i = 0; i < seq.length(); i++)
43		{
44	44	if (seq.charAt(i) != ' ')
45		{
46	40	sb.append(seq.charAt(i));
47		}
48		}
49	4	_content = sb.toString();
50		}
51		}
52
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
53	6	public String getContent()...
54		{
55	6	return _content;
56		}
57
58		}