Classes

Class	Line #	Total Statements	Complexity	Uncovered Elements	TOTAL Coverage	Actions
EmblSequence	28	2	2	0	1.0100%	Show methods

Class EmblSequence

Class EmblSequence	Line # 28	Total Statements 2	Complexity 2	Uncovered Elements 0	TOTAL Coverage 1.0100%
getSequence() : String   getSequence() : String	3535	1.01	1.01	0.00	1.0 1.0100%
setSequence(String) : void   setSequence(String) : void	4444	1.01	1.01	0.00	1.0 1.0100%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.datamodel.xdb.embl;
22
23		/**
24		* Data model for the sequence extracted from an EMBL query reply
25		*
26		* @see embl_mapping.xml
27		*/
		100% Uncovered Elements: 0 (4) Complexity: 2 Complexity Density: 1
28		public class EmblSequence
29		{
30		String sequence;
31
32		/**
33		* @return the sequence
34		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
35	4	public String getSequence()...
36		{
37	4	return sequence;
38		}
39
40		/**
41		* @param sequence
42		* the sequence to set
43		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
44	2	public void setSequence(String sequence)...
45		{
46		// remove spaces introduced by unmarshalling of newline characters
47	2	this.sequence = sequence.replace(" ", "");
48		}
49		}