jalviewX
File EmblFeature.java
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Classes
| Class | Line # | Actions | ||||
|---|---|---|---|---|---|---|
| EmblFeature | 32 | 8 | 8 | 0 |
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| 1 | /* | |
| 2 | * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) | |
| 3 | * Copyright (C) $$Year-Rel$$ The Jalview Authors | |
| 4 | * | |
| 5 | * This file is part of Jalview. | |
| 6 | * | |
| 7 | * Jalview is free software: you can redistribute it and/or | |
| 8 | * modify it under the terms of the GNU General Public License | |
| 9 | * as published by the Free Software Foundation, either version 3 | |
| 10 | * of the License, or (at your option) any later version. | |
| 11 | * | |
| 12 | * Jalview is distributed in the hope that it will be useful, but | |
| 13 | * WITHOUT ANY WARRANTY; without even the implied warranty | |
| 14 | * of MERCHANTABILITY or FITNESS FOR A PARTICULAR | |
| 15 | * PURPOSE. See the GNU General Public License for more details. | |
| 16 | * | |
| 17 | * You should have received a copy of the GNU General Public License | |
| 18 | * along with Jalview. If not, see <http://www.gnu.org/licenses/>. | |
| 19 | * The Jalview Authors are detailed in the 'AUTHORS' file. | |
| 20 | */ | |
| 21 | package jalview.datamodel.xdb.embl; | |
| 22 | ||
| 23 | import jalview.datamodel.DBRefEntry; | |
| 24 | ||
| 25 | import java.util.Vector; | |
| 26 | ||
| 27 | /** | |
| 28 | * Data model for a <feature> element returned from an EMBL query reply | |
| 29 | * | |
| 30 | * @see embl_mapping.xml | |
| 31 | */ | |
| 32 | public class EmblFeature | |
| 33 | { | |
| 34 | String name; | |
| 35 | ||
| 36 | Vector<DBRefEntry> dbRefs; | |
| 37 | ||
| 38 | Vector<Qualifier> qualifiers; | |
| 39 | ||
| 40 | String location; | |
| 41 | ||
| 42 | /** | |
| 43 | * @return the dbRefs | |
| 44 | */ | |
| 45 | 29 |  public Vector<DBRefEntry> getDbRefs() |
| 46 | { | |
| 47 | 29 | return dbRefs; |
| 48 | } | |
| 49 | ||
| 50 | /** | |
| 51 | * @param dbRefs | |
| 52 | * the dbRefs to set | |
| 53 | */ | |
| 54 | 4 | public void setDbRefs(Vector<DBRefEntry> dbRefs) |
| 55 | { | |
| 56 | 4 | this.dbRefs = dbRefs; |
| 57 | } | |
| 58 | ||
| 59 | /** | |
| 60 | * @return the location | |
| 61 | */ | |
| 62 | 13 | public String getLocation() |
| 63 | { | |
| 64 | 13 | return location; |
| 65 | } | |
| 66 | ||
| 67 | /** | |
| 68 | * @param loc | |
| 69 | */ | |
| 70 | 7 | public void setLocation(String loc) |
| 71 | { | |
| 72 | 7 | this.location = loc; |
| 73 | } | |
| 74 | ||
| 75 | /** | |
| 76 | * @return the name | |
| 77 | */ | |
| 78 | 15 | public String getName() |
| 79 | { | |
| 80 | 15 | return name; |
| 81 | } | |
| 82 | ||
| 83 | /** | |
| 84 | * @param name | |
| 85 | * the name to set | |
| 86 | */ | |
| 87 | 6 | public void setName(String name) |
| 88 | { | |
| 89 | 6 | this.name = name; |
| 90 | } | |
| 91 | ||
| 92 | /** | |
| 93 | * @return the qualifiers | |
| 94 | */ | |
| 95 | 36 | public Vector<Qualifier> getQualifiers() |
| 96 | { | |
| 97 | 36 | return qualifiers; |
| 98 | } | |
| 99 | ||
| 100 | /** | |
| 101 | * @param qualifiers | |
| 102 | * the qualifiers to set | |
| 103 | */ | |
| 104 | 6 | public void setQualifiers(Vector<Qualifier> qualifiers) |
| 105 | { | |
| 106 | 6 | this.qualifiers = qualifiers; |
| 107 | } | |
| 108 | } |