Classes

Class	Line #	Total Statements	Complexity	Uncovered Elements	TOTAL Coverage	Actions
StartRegionIteratorTest	33	118	3	0	1.0100%	Show methods

Class StartRegionIteratorTest

Class StartRegionIteratorTest	Line # 33	Total Statements 118	Complexity 3	Uncovered Elements 0	TOTAL Coverage 1.0100%
testBasicBoundsIterator() : void   testBasicBoundsIterator() : void	3838	40.040	1.01	0.00	1.0 1.0100%
testBoundsIteratorUsingNullCursor() : void   testBoundsIteratorUsingNullCursor() : void	100100	41.041	1.01	0.00	1.0 1.0100%
testBoundsIteratorUsingCursor() : void   testBoundsIteratorUsingCursor() : void	163163	37.037	1.01	0.00	1.0 1.0100%

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	0.34710744	jalview.datamodel.StartRegionIteratorTest.testBoundsIteratorUsingNullCursorjalview.datamodel.StartRegionIteratorTest.testBoundsIteratorUsingNullCursor	1PASS
	0.338843	jalview.datamodel.StartRegionIteratorTest.testBasicBoundsIteratorjalview.datamodel.StartRegionIteratorTest.testBasicBoundsIterator	1PASS
	0.3140496	jalview.datamodel.StartRegionIteratorTest.testBoundsIteratorUsingCursorjalview.datamodel.StartRegionIteratorTest.testBoundsIteratorUsingCursor	1PASS

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.datamodel;
22
23		import static org.testng.Assert.assertEquals;
24		import static org.testng.AssertJUnit.assertFalse;
25		import static org.testng.AssertJUnit.assertTrue;
26
27		import java.util.ArrayList;
28		import java.util.Iterator;
29		import java.util.List;
30
31		import org.testng.annotations.Test;
32
		100% Uncovered Elements: 0 (121) Complexity: 3 Complexity Density: 0.03
33		public class StartRegionIteratorTest
34		{
35		/**
36		* Test the start region iterator
37		*/
		100% Uncovered Elements: 0 (40) Complexity: 1 Complexity Density: 0.03 1PASS
38	1	@Test(groups = { "Functional" })...
39		public void testBasicBoundsIterator()
40		{
41	1	List<int[]> hiddenColumns = null;
42
43		// null hidden columns
44	1	Iterator<Integer> it = new StartRegionIterator(3, 10,
45		hiddenColumns);
46	1	assertFalse(it.hasNext());
47
48	1	hiddenColumns = new ArrayList<>();
49
50		// no hidden columns
51	1	it = new StartRegionIterator(3, 10, hiddenColumns);
52	1	assertFalse(it.hasNext());
53
54		// add some hidden columns
55	1	hiddenColumns.add(new int[] { 5, 10 });
56	1	hiddenColumns.add(new int[] { 25, 40 });
57
58	1	it = new StartRegionIterator(3, 10, hiddenColumns);
59	1	assertTrue(it.hasNext());
60	1	Integer result = it.next();
61	1	assertEquals(5, (int) result);
62	1	assertFalse(it.hasNext());
63
64	1	it = new StartRegionIterator(3, 15, hiddenColumns);
65	1	assertTrue(it.hasNext());
66	1	result = it.next();
67	1	assertEquals(5, (int) result);
68	1	assertFalse(it.hasNext());
69
70	1	it = new StartRegionIterator(3, 18, hiddenColumns);
71	1	assertTrue(it.hasNext());
72	1	result = it.next();
73	1	assertEquals(5, (int) result);
74	1	assertFalse(it.hasNext());
75
76	1	it = new StartRegionIterator(3, 19, hiddenColumns);
77	1	assertTrue(it.hasNext());
78	1	result = it.next();
79	1	assertEquals(5, (int) result);
80	1	assertTrue(it.hasNext());
81	1	result = it.next();
82	1	assertEquals(19, (int) result);
83	1	assertFalse(it.hasNext());
84
85	1	hiddenColumns.add(new int[] { 47, 50 });
86
87	1	it = new StartRegionIterator(15, 60, hiddenColumns);
88	1	assertTrue(it.hasNext());
89	1	result = it.next();
90	1	assertEquals(19, (int) result);
91	1	assertTrue(it.hasNext());
92	1	result = it.next();
93	1	assertEquals(25, (int) result);
94	1	assertFalse(it.hasNext());
95		}
96
97		/**
98		* Test the start region iterator with null cursor
99		*/
		100% Uncovered Elements: 0 (41) Complexity: 1 Complexity Density: 0.02 1PASS
100	1	@Test(groups = { "Functional" })...
101		public void testBoundsIteratorUsingNullCursor()
102		{
103	1	List<int[]> hiddenColumns = null;
104	1	HiddenCursorPosition pos = null;
105
106		// null hidden columns
107	1	Iterator<Integer> it = new StartRegionIterator(pos, 3, 10,
108		hiddenColumns);
109	1	assertFalse(it.hasNext());
110
111	1	hiddenColumns = new ArrayList<>();
112
113		// no hidden columns
114	1	it = new StartRegionIterator(pos, 3, 10, hiddenColumns);
115	1	assertFalse(it.hasNext());
116
117		// add some hidden columns
118	1	hiddenColumns.add(new int[] { 5, 10 });
119	1	hiddenColumns.add(new int[] { 25, 40 });
120
121	1	it = new StartRegionIterator(pos, 3, 10, hiddenColumns);
122	1	assertTrue(it.hasNext());
123	1	Integer result = it.next();
124	1	assertEquals(5, (int) result);
125	1	assertFalse(it.hasNext());
126
127	1	it = new StartRegionIterator(pos, 3, 15, hiddenColumns);
128	1	assertTrue(it.hasNext());
129	1	result = it.next();
130	1	assertEquals(5, (int) result);
131	1	assertFalse(it.hasNext());
132
133	1	it = new StartRegionIterator(pos, 3, 18, hiddenColumns);
134	1	assertTrue(it.hasNext());
135	1	result = it.next();
136	1	assertEquals(5, (int) result);
137	1	assertFalse(it.hasNext());
138
139	1	it = new StartRegionIterator(pos, 3, 19, hiddenColumns);
140	1	assertTrue(it.hasNext());
141	1	result = it.next();
142	1	assertEquals(5, (int) result);
143	1	assertTrue(it.hasNext());
144	1	result = it.next();
145	1	assertEquals(19, (int) result);
146	1	assertFalse(it.hasNext());
147
148	1	hiddenColumns.add(new int[] { 47, 50 });
149
150	1	it = new StartRegionIterator(pos, 15, 60, hiddenColumns);
151	1	assertTrue(it.hasNext());
152	1	result = it.next();
153	1	assertEquals(19, (int) result);
154	1	assertTrue(it.hasNext());
155	1	result = it.next();
156	1	assertEquals(25, (int) result);
157	1	assertFalse(it.hasNext());
158		}
159
160		/**
161		* Test the start region iterator with nonnull cursor
162		*/
		100% Uncovered Elements: 0 (37) Complexity: 1 Complexity Density: 0.03 1PASS
163	1	@Test(groups = { "Functional" })...
164		public void testBoundsIteratorUsingCursor()
165		{
166	1	List<int[]> hiddenColumns = new ArrayList<>();
167
168		// add some hidden columns
169	1	hiddenColumns.add(new int[] { 5, 10 });
170	1	hiddenColumns.add(new int[] { 25, 40 });
171
172	1	HiddenCursorPosition pos = new HiddenCursorPosition(0, 0);
173
174	1	Iterator<Integer> it = new StartRegionIterator(pos, 3, 10,
175		hiddenColumns);
176	1	assertTrue(it.hasNext());
177	1	Integer result = it.next();
178	1	assertEquals(5, (int) result);
179	1	assertFalse(it.hasNext());
180
181	1	it = new StartRegionIterator(pos, 3, 15, hiddenColumns);
182	1	assertTrue(it.hasNext());
183	1	result = it.next();
184	1	assertEquals(5, (int) result);
185	1	assertFalse(it.hasNext());
186
187	1	it = new StartRegionIterator(pos, 3, 18, hiddenColumns);
188	1	assertTrue(it.hasNext());
189	1	result = it.next();
190	1	assertEquals(5, (int) result);
191	1	assertFalse(it.hasNext());
192
193	1	it = new StartRegionIterator(pos, 3, 19, hiddenColumns);
194	1	assertTrue(it.hasNext());
195	1	result = it.next();
196	1	assertEquals(5, (int) result);
197	1	assertTrue(it.hasNext());
198	1	result = it.next();
199	1	assertEquals(19, (int) result);
200	1	assertFalse(it.hasNext());
201
202	1	pos = new HiddenCursorPosition(1, 6);
203	1	hiddenColumns.add(new int[] { 47, 50 });
204
205	1	it = new StartRegionIterator(pos, 15, 60, hiddenColumns);
206	1	assertTrue(it.hasNext());
207	1	result = it.next();
208	1	assertEquals(19, (int) result);
209	1	assertTrue(it.hasNext());
210	1	result = it.next();
211	1	assertEquals(25, (int) result);
212	1	assertFalse(it.hasNext());
213		}
214		}