Classes

Class	Line #	Total Statements	Complexity	Uncovered Elements	TOTAL Coverage	Actions
SearchResultMatchI	27	0	0	0	-1.0 -	Show methods

Class SearchResultMatchI

Class SearchResultMatchI	Line # 27	Total Statements 0	Complexity 0	Uncovered Elements 0	TOTAL Coverage -1.0 -

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.datamodel;
22
23		/**
24		* An interface that describes one matched region of an alignment, as one
25		* contiguous portion of a single dataset sequence
26		*/
		- Uncovered Elements: 0 (0) Complexity: 0 Complexity Density: -
27		public interface SearchResultMatchI
28		{
29		/**
30		* Returns the matched sequence
31		*
32		* @return
33		*/
34		SequenceI getSequence();
35
36		/**
37		* Returns the start position of the match in the sequence (base 1)
38		*
39		* @return
40		*/
41		int getStart();
42
43		/**
44		* Returns the end position of the match in the sequence (base 1)
45		*
46		* @return
47		*/
48		int getEnd();
49
50		}