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package jalview.datamodel; |
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import static org.testng.Assert.assertTrue; |
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import jalview.analysis.AlignmentGenerator; |
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import java.util.Hashtable; |
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import java.util.NoSuchElementException; |
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import org.testng.annotations.BeforeClass; |
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import org.testng.annotations.Test; |
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| 62.2% |
Uncovered Elements: 17 (45) |
Complexity: 11 |
Complexity Density: 0.38 |
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public class AllRowsIteratorTest |
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{ |
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AlignmentI al; |
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Hashtable<SequenceI, SequenceCollectionI> hiddenRepSequences = new Hashtable<>(); |
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| 0% |
Uncovered Elements: 7 (7) |
Complexity: 2 |
Complexity Density: 0.4 |
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@BeforeClass... |
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public void setup() |
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{ |
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AlignmentGenerator gen = new AlignmentGenerator(false); |
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al = gen.generate(20, 15, 123, 5, 5); |
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if (!hiddenRepSequences.isEmpty()) |
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{ |
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al.getHiddenSequences().showAll(hiddenRepSequences); |
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} |
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hideSequences(2, 4); |
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} |
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| 100% |
Uncovered Elements: 0 (8) |
Complexity: 2 |
Complexity Density: 0.33 |
1PASS
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@Test(groups = { "Functional" })... |
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public void testHasNextAndNext() |
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{ |
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AllRowsIterator it = new AllRowsIterator(0, 3, al); |
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int count = 0; |
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while (it.hasNext()) |
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{ |
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it.next(); |
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count++; |
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} |
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assertTrue(count == 4, "hasNext() is false after 4 iterations"); |
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} |
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| 100% |
Uncovered Elements: 0 (6) |
Complexity: 2 |
Complexity Density: 0.5 |
1PASS
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@Test(... |
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groups = { "Functional" }, |
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expectedExceptions = { NoSuchElementException.class }) |
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public void testLastNext() throws NoSuchElementException |
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{ |
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AllRowsIterator it = new AllRowsIterator(0, 3, al); |
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while (it.hasNext()) |
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it.next(); |
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} |
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it.next(); |
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} |
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| 100% |
Uncovered Elements: 0 (2) |
Complexity: 1 |
Complexity Density: 0.5 |
1PASS
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@Test(... |
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groups = { "Functional" }, |
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expectedExceptions = { UnsupportedOperationException.class }) |
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public void testRemove() throws UnsupportedOperationException |
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{ |
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AllRowsIterator it = new AllRowsIterator(0, 3, al); |
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it.remove(); |
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} |
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| 0% |
Uncovered Elements: 8 (8) |
Complexity: 2 |
Complexity Density: 0.33 |
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private void hideSequences(int start, int end)... |
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{ |
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SequenceI[] allseqs = al.getSequencesArray(); |
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SequenceGroup theseSeqs = new SequenceGroup(); |
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for (int i = start; i <= end; i++) |
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{ |
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theseSeqs.addSequence(allseqs[i], false); |
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al.getHiddenSequences().hideSequence(allseqs[i]); |
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} |
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hiddenRepSequences.put(allseqs[start], theseSeqs); |
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} |
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| 100% |
Uncovered Elements: 0 (8) |
Complexity: 2 |
Complexity Density: 0.33 |
1PASS
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@Test(groups = { "Functional" })... |
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public void testOneElement() |
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{ |
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AllRowsIterator it = new AllRowsIterator(0, 0, al); |
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int count = 0; |
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while (it.hasNext()) |
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{ |
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it.next(); |
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count++; |
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} |
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assertTrue(count == 1, "hasNext() is false after 1 iteration"); |
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} |
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} |