Create installers for Jalview Develop edition
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JIRA Issues
This page lists the JIRA issues that have been linked to builds related to this plan, ordered by last built. This includes issues specified in commit messages, labels or comments for builds, as well as issues manually linked to builds.
| Type | Key | Summary | Status | Assignee | Fix versions | Related Builds | Last Built |
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JAL-1551 | Standard source code formatting and editing settings | In Progress | Mungo Carstairs | 6 related builds | Last built: 2 years ago | |
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JAL-1713 | Overview window isn't saved in project file | Closed | Mungo Carstairs | 2.11.3.0, 2.11.3 | 2 related builds | Last built: 2 years ago |
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JAL-1988 | Can quit Jalview while 'save project' is in progress | Closed | Ben Soares | 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-1998 | PDBfile parser fails with 'ArithmeticException' for some PDB entries | Closed | Tochukwu Charles N Ofoegbu | 2.10.0 | 1 related build | Last built: 2 years ago |
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JAL-2349 | Contact prediction visualisation | In Progress | James Procter | 2.12 | 2 related builds | Last built: 2 years ago |
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JAL-2353 | ignore sequence version numbers in IDs when resolving database references | Closed | James Procter | 2.11.2, 2.11.2.6, 2.11.3.0, 2.11.3 | 2 related builds | Last built: 2 years ago |
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JAL-3077 | Capture correct accession version when retrieving from Ensembl | In Progress | James Procter | 2.11.1, 2.12.0 | 2 related builds | Last built: 2 years ago |
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JAL-3416 | FlatLAF default look and feel on Linux, OSX and everywhere else ? | Closed | Ben Soares | 2.11.2.6, 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-3772 | Prompt to save unsaved Alignment windows on close or quit | Closed | Ben Soares | 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-3776 | Cancelling interactive calculation leaves empty progress bar. | Ready for testing | Mateusz Warowny | 2.12.0 | 1 related build | Last built: 2 years ago |
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JAL-3855 | Discover and import alphafold2 models and metadata from https://alphafold.ebi.ac.uk/ | Closed | James Procter | 2.11.3.0, 2.11.3 | 2 related builds | Last built: 2 years ago |
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JAL-4019 | Ambiguous Base Colourscheme | Closed | Ben Soares | 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-4054 | Review new features in install4j10 and install on build server | Closed | Ben Soares | 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-4064 | Native M1 build for macOS using Adoptium JRE 11 macos-aarch64 | Closed | Ben Soares | 2.11.3.0, 2.11.3 | 2 related builds | Last built: 2 years ago |
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JAL-4090 | Release 2.11.3.0 | Closed | James Procter | 2.11.3.0 | 3 related builds | Last built: 2 years ago |
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JAL-4095 | interactive picking of regions in pAE matrices | Closed | James Procter | 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-4101 | Rfam API domain has changed. Old domain certificate has expired. | Closed | Ben Soares | 2.11.2.6 | 1 related build | Last built: 2 years ago |
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JAL-4102 | 2.11.2.6 patch release | Closed | James Procter | 2.11.2.6 | 2 related builds | Last built: 2 years ago |
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JAL-4104 | Application ownership | Closed | Ben Soares | 2.11.4.0 | 2 related builds | Last built: 2 years ago |
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JAL-4114 | Jalview 2.11.2.5 not compatible with 3d-beacons api v2.0 | Closed | James Procter | 2.11.2.6 | 2 related builds | Last built: 2 years ago |
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JAL-4116 | PDB structures slow to view when Jalview Java console is open | Closed | James Procter | 2.11.2.7, 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-4118 | Fix jalview.gui.QuitHandlerTest.testSavedProjectChanges and testSavedAlignmentChanges test failing on build server | Closed | Ben Soares | 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-4125 | Flatlaf QuitHandler: Warning dialog about closing an external structure viewer doesn't display properly | Closed | Ben Soares | 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-4126 | 'use original colours' option of colour by annotation not honoured when restoring view from project | Closed | James Procter | 2.11.3.0 | 2 related builds | Last built: 2 years ago |
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JAL-4127 | 'Reload' for a jalview project results in all windows being duplicated | Open | James Procter | 2.12.0 | 2 related builds | Last built: 2 years ago |