Getdown DEVELOP Installers

Create installers for Jalview Develop edition
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JIRA Issues

This page lists the JIRA issues that have been linked to builds related to this plan, ordered by last built. This includes issues specified in commit messages, labels or comments for builds, as well as issues manually linked to builds.

JIRA Issues (26 issues)
Type Key Summary Status Assignee Fix versions Related Builds Last Built
Task JAL-1551 Standard source code formatting and editing settings In Progress Mungo Carstairs 3 related builds Last built: 1 year ago
Bug JAL-1713 Overview window isn't saved in project file Closed Mungo Carstairs 2.11.3.0, 2.11.3 2 related builds Last built: 1 year ago
Bug JAL-1988 Can quit Jalview while 'save project' is in progress Closed Ben Soares 2.11.3.0 2 related builds Last built: 1 year ago
Bug JAL-1998 PDBfile parser fails with 'ArithmeticException' for some PDB entries Closed Tochukwu Charles N Ofoegbu 2.10.0 1 related build Last built: 1 year ago
Epic JAL-2349 Contact prediction visualisation In Progress James Procter 2.12 2 related builds Last built: 1 year ago
Improvement JAL-2353 ignore sequence version numbers in IDs when resolving database references Closed James Procter 2.11.2, 2.11.2.6, 2.11.3.0, 2.11.3 2 related builds Last built: 1 year ago
Improvement JAL-3077 Capture correct accession version when retrieving from Ensembl In Progress James Procter 2.11.1, 2.12.0 2 related builds Last built: 1 year ago
New Feature JAL-3416 FlatLAF default look and feel on Linux, OSX and everywhere else ? Closed Ben Soares 2.11.2.6, 2.11.3.0 2 related builds Last built: 1 year ago
New Feature JAL-3772 Prompt to save unsaved Alignment windows on close or quit Closed Ben Soares 2.11.3.0 2 related builds Last built: 1 year ago
Bug JAL-3776 Cancelling interactive calculation leaves empty progress bar. Ready for testing Mateusz Warowny 2.12.0 1 related build Last built: 1 year ago
New Feature JAL-3855 Discover and import alphafold2 models and metadata from https://alphafold.ebi.ac.uk/ Closed James Procter 2.11.3.0, 2.11.3 2 related builds Last built: 1 year ago
New Feature JAL-4019 Ambiguous Base Colourscheme Closed Ben Soares 2.11.3.0 2 related builds Last built: 1 year ago
Improvement JAL-4054 Review new features in install4j10 and install on build server Closed Ben Soares 2.11.3.0 2 related builds Last built: 1 year ago
Improvement JAL-4064 Native M1 build for macOS using Adoptium JRE 11 macos-aarch64 Closed Ben Soares 2.11.3.0, 2.11.3 2 related builds Last built: 1 year ago
Task JAL-4090 Release 2.11.3.0 Closed James Procter 2.11.3.0 3 related builds Last built: 1 year ago
New Feature JAL-4095 interactive picking of regions in pAE matrices Closed James Procter 2.11.3.0 2 related builds Last built: 1 year ago
Bug JAL-4101 Rfam API domain has changed. Old domain certificate has expired. Closed Ben Soares 2.11.2.6 1 related build Last built: 1 year ago
Task JAL-4102 2.11.2.6 patch release Closed James Procter 2.11.2.6 2 related builds Last built: 1 year ago
Bug JAL-4104 Application ownership Open Ben Soares 2.12, 2.12.0 2 related builds Last built: 1 year ago
Bug JAL-4114 Jalview 2.11.2.5 not compatible with 3d-beacons api v2.0 Closed James Procter 2.11.2.6 2 related builds Last built: 1 year ago
Bug JAL-4116 PDB structures slow to view when Jalview Java console is open Closed James Procter 2.11.2.7, 2.11.3.0 2 related builds Last built: 1 year ago
Bug JAL-4118 Fix jalview.gui.QuitHandlerTest.testSavedProjectChanges and testSavedAlignmentChanges test failing on build server Closed Ben Soares 2.11.3.0 2 related builds Last built: 1 year ago
Bug JAL-4125 Flatlaf QuitHandler: Warning dialog about closing an external structure viewer doesn't display properly Closed Ben Soares 2.11.3.0 2 related builds Last built: 1 year ago
Bug JAL-4126 'use original colours' option of colour by annotation not honoured when restoring view from project Closed James Procter 2.11.3.0 2 related builds Last built: 1 year ago
Bug JAL-4127 'Reload' for a jalview project results in all windows being duplicated Open James Procter 2.12.0 2 related builds Last built: 1 year ago
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