Create installers for Jalview Develop edition
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JIRA Issues
This page lists the JIRA issues that have been linked to builds related to this plan, ordered by last built. This includes issues specified in commit messages, labels or comments for builds, as well as issues manually linked to builds.
| Type | Key | Summary | Status | Assignee | Fix versions | Related Builds | Last Built |
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JAL-1551 | Standard source code formatting and editing settings | In Progress | Mungo Carstairs | 2 related builds | Last built: 3 months ago | |
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JAL-1713 | Overview window isn't saved in project file | Closed | Mungo Carstairs | 2.11.3.0, 2.11.3 | 2 related builds | Last built: 3 months ago |
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JAL-1988 | Can quit Jalview while 'save project' is in progress | Ready for testing | Ben Soares | 2.11.0, 2.12.0 | 2 related builds | Last built: 3 months ago |
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JAL-1998 | PDBfile parser fails with 'ArithmeticException' for some PDB entries | Closed | Tochukwu Charles N Ofoegbu | 2.10.0 | 1 related build | Last built: 3 months ago |
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JAL-2349 | Contact prediction visualisation | In Progress | James Procter | 2 related builds | Last built: 3 months ago | |
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JAL-2353 | ignore sequence version numbers in IDs when resolving database references | In Progress | James Procter | 2.11.2, 2.11.2.6, 2.11.3.0, 2.11.3 | 3 related builds | Last built: 3 months ago |
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JAL-3077 | Capture correct accession version when retrieving from Ensembl | In Progress | James Procter | 2.11.1, 2.12.0 | 2 related builds | Last built: 3 months ago |
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JAL-3416 | FlatLAF default look and feel on Linux, OSX and everywhere else ? | Ready for testing | James Procter | 2.11.2.6, 2.11.3.0, 2.11.3 | 7 related builds | Last built: 3 months ago |
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JAL-3772 | Prompt to save unsaved Alignment windows on close or quit | Ready for testing | Ben Soares | 2.11.3.0 | 2 related builds | Last built: 3 months ago |
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JAL-3776 | Cancelling interactive calculation leaves empty progress bar. | Ready for testing | Mateusz Warowny | 1 related build | Last built: 3 months ago | |
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JAL-3855 | Discover and import alphafold2 models and metadata from https://alphafold.ebi.ac.uk/ | In Progress | James Procter | 2.11.3.0, 2.11.3 | 2 related builds | Last built: 3 months ago |
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JAL-4019 | Ambiguous Base Colourscheme | Ready for testing | James Procter | 2.11.3.0 | 2 related builds | Last built: 3 months ago |
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JAL-4054 | Review new features in install4j10 and install on build server | Ready for testing | Ben Soares | 2.11.3.0 | 2 related builds | Last built: 3 months ago |
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JAL-4064 | Native M1 build for macOS using Adoptium JRE 11 macos-aarch64 | Ready for testing | James Procter | 2.11.3.0, 2.11.3 | 2 related builds | Last built: 3 months ago |
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JAL-4090 | Release the 2.11.3 series | Open | James Procter | 2.11.3.0 | 2 related builds | Last built: 3 months ago |
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JAL-4095 | interactive picking of regions in pAE matrices | In Progress | James Procter | 2.11.3.0, 2.11.3 | 2 related builds | Last built: 3 months ago |
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JAL-4101 | Rfam API domain has changed. Old domain certificate has expired. | Closed | Ben Soares | 2.11.2.6 | 2 related builds | Last built: 3 months ago |
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JAL-4102 | 2.11.2.6 patch release | Closed | James Procter | 2.11.2.6 | 5 related builds | Last built: 3 months ago |
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JAL-4104 | Application ownership | Open | Ben Soares | 2.11.3.0, 2.11.3, 2.12 | 4 related builds | Last built: 3 months ago |
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JAL-4114 | Jalview 2.11.2.5 not compatible with 3d-beacons api v2.0 | Closed | James Procter | 2.11.2.6, 2.11.3.0, 2.12.0 | 3 related builds | Last built: 3 months ago |
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JAL-4116 | PDB structures slow to view when Jalview Java console is open | In Progress | James Procter | 2.11.2.7, 2.11.3.0 | 4 related builds | Last built: 3 months ago |
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JAL-4118 | Fix jalview.gui.QuitHandlerTest.testSavedProjectChanges and testSavedAlignmentChanges test failing on build server | Closed | Ben Soares | 2.11.3.0 | 2 related builds | Last built: 3 months ago |
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JAL-4125 | Flatlaf QuitHandler: Warning dialog about closing an external structure viewer doesn't display properly | Ready for testing | Ben Soares | 2.11.3.0 | 6 related builds | Last built: 3 months ago |
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JAL-4126 | 'use original colours' option of colour by annotation not honoured when restoring view from project | Being documented | James Procter | 2.11.3.0 | 2 related builds | Last built: 3 months ago |
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JAL-4127 | 'Reload' for a jalview project results in all windows being duplicated | Open | James Procter | 2.11.3.0 | 2 related builds | Last built: 3 months ago |