Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
MapListType	74	10	8	1.0100%	Show methods
MapListType.MapListFrom	212	4	4	1.0100%	Show methods
MapListType.MapListTo	274	4	4	1.0100%	Show methods

Class MapListType

Class MapListType	Line # 74	Total Statements 10	Complexity 8	TOTAL Coverage 1.0100%
getMapListFrom() : List<MapListType.MapListFrom>   getMapListFrom() : List<MapListType.MapListFrom>	107107	3.03	2.02	1.0 1.0100%
getMapListTo() : List<MapListType.MapListTo>   getMapListTo() : List<MapListType.MapListTo>	136136	3.03	2.02	1.0 1.0100%
getMapFromUnit() : BigInteger   getMapFromUnit() : BigInteger	151151	1.01	1.01	1.0 1.0100%
setMapFromUnit(BigInteger) : void   setMapFromUnit(BigInteger) : void	163163	1.01	1.01	1.0 1.0100%
getMapToUnit() : BigInteger   getMapToUnit() : BigInteger	175175	1.01	1.01	1.0 1.0100%
setMapToUnit(BigInteger) : void   setMapToUnit(BigInteger) : void	187187	1.01	1.01	1.0 1.0100%

 

Class MapListType.MapListFrom

Class MapListType.MapListFrom	Line # 212	Total Statements 4	Complexity 4	TOTAL Coverage 1.0100%
getStart() : int   getStart() : int	223223	1.01	1.01	1.0 1.0100%
setStart(int) : void   setStart(int) : void	231231	1.01	1.01	1.0 1.0100%
getEnd() : int   getEnd() : int	239239	1.01	1.01	1.0 1.0100%
setEnd(int) : void   setEnd(int) : void	247247	1.01	1.01	1.0 1.0100%

 

Class MapListType.MapListTo

Class MapListType.MapListTo	Line # 274	Total Statements 4	Complexity 4	TOTAL Coverage 1.0100%
getStart() : int   getStart() : int	285285	1.01	1.01	1.0 1.0100%
setStart(int) : void   setStart(int) : void	293293	1.01	1.01	1.0 1.0100%
getEnd() : int   getEnd() : int	301301	1.01	1.01	1.0 1.0100%
setEnd(int) : void   setEnd(int) : void	309309	1.01	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	1.0	jalview.project.Jalview2xmlTests.testStoreAndRecoverGeneLocusjalview.project.Jalview2xmlTests.testStoreAndRecoverGeneLocus	1PASS
	0.5555556	jalview.io.CrossRef2xmlTests.openCrossrefsForEnsemblTwicejalview.io.CrossRef2xmlTests.openCrossrefsForEnsemblTwice	1PASS

 

Source view

1		//
2		// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
3		// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
4		// Any modifications to this file will be lost upon recompilation of the source schema.
5		// Generated on: 2019.06.07 at 02:21:15 PM BST
6		//
7
8
9		package jalview.xml.binding.jalview;
10
11		import java.math.BigInteger;
12		import java.util.ArrayList;
13		import java.util.List;
14		import javax.xml.bind.annotation.XmlAccessType;
15		import javax.xml.bind.annotation.XmlAccessorType;
16		import javax.xml.bind.annotation.XmlAttribute;
17		import javax.xml.bind.annotation.XmlSchemaType;
18		import javax.xml.bind.annotation.XmlSeeAlso;
19		import javax.xml.bind.annotation.XmlType;
20
21
22		/**
23		*
24		* This effectively represents a java.util.MapList object
25		*
26		*
27		* <p>Java class for mapListType complex type.
28		*
29		* <p>The following schema fragment specifies the expected content contained within this class.
30		*
31		* <pre>
32		* &lt;complexType name="mapListType">
33		* &lt;complexContent>
34		* &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
35		* &lt;sequence>
36		* &lt;element name="mapListFrom" maxOccurs="unbounded" minOccurs="0">
37		* &lt;complexType>
38		* &lt;complexContent>
39		* &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
40		* &lt;attribute name="start" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
41		* &lt;attribute name="end" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
42		* &lt;/restriction>
43		* &lt;/complexContent>
44		* &lt;/complexType>
45		* &lt;/element>
46		* &lt;element name="mapListTo" maxOccurs="unbounded" minOccurs="0">
47		* &lt;complexType>
48		* &lt;complexContent>
49		* &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
50		* &lt;attribute name="start" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
51		* &lt;attribute name="end" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
52		* &lt;/restriction>
53		* &lt;/complexContent>
54		* &lt;/complexType>
55		* &lt;/element>
56		* &lt;/sequence>
57		* &lt;attribute name="mapFromUnit" use="required" type="{http://www.w3.org/2001/XMLSchema}positiveInteger" />
58		* &lt;attribute name="mapToUnit" use="required" type="{http://www.w3.org/2001/XMLSchema}positiveInteger" />
59		* &lt;/restriction>
60		* &lt;/complexContent>
61		* &lt;/complexType>
62		* </pre>
63		*
64		*
65		*/
66		@XmlAccessorType(XmlAccessType.FIELD)
67		@XmlType(name = "mapListType", propOrder = {
68		"mapListFrom",
69		"mapListTo"
70		})
71		@XmlSeeAlso({
72		Mapping.class
73		})
		100% Uncovered Elements: 0 (20) Complexity: 8 Complexity Density: 0.8
74		public class MapListType {
75
76		protected List<MapListType.MapListFrom> mapListFrom;
77		protected List<MapListType.MapListTo> mapListTo;
78		@XmlAttribute(name = "mapFromUnit", required = true)
79		@XmlSchemaType(name = "positiveInteger")
80		protected BigInteger mapFromUnit;
81		@XmlAttribute(name = "mapToUnit", required = true)
82		@XmlSchemaType(name = "positiveInteger")
83		protected BigInteger mapToUnit;
84
85		/**
86		* Gets the value of the mapListFrom property.
87		*
88		* <p>
89		* This accessor method returns a reference to the live list,
90		* not a snapshot. Therefore any modification you make to the
91		* returned list will be present inside the JAXB object.
92		* This is why there is not a <CODE>set</CODE> method for the mapListFrom property.
93		*
94		* <p>
95		* For example, to add a new item, do as follows:
96		* <pre>
97		* getMapListFrom().add(newItem);
98		* </pre>
99		*
100		*
101		* <p>
102		* Objects of the following type(s) are allowed in the list
103		* {@link MapListType.MapListFrom }
104		*
105		*
106		*/
		100% Uncovered Elements: 0 (5) Complexity: 2 Complexity Density: 0.67
107	94	public List<MapListType.MapListFrom> getMapListFrom() {...
108	94	if (mapListFrom == null) {
109	2	mapListFrom = new ArrayList<MapListType.MapListFrom>();
110		}
111	94	return this.mapListFrom;
112		}
113
114		/**
115		* Gets the value of the mapListTo property.
116		*
117		* <p>
118		* This accessor method returns a reference to the live list,
119		* not a snapshot. Therefore any modification you make to the
120		* returned list will be present inside the JAXB object.
121		* This is why there is not a <CODE>set</CODE> method for the mapListTo property.
122		*
123		* <p>
124		* For example, to add a new item, do as follows:
125		* <pre>
126		* getMapListTo().add(newItem);
127		* </pre>
128		*
129		*
130		* <p>
131		* Objects of the following type(s) are allowed in the list
132		* {@link MapListType.MapListTo }
133		*
134		*
135		*/
		100% Uncovered Elements: 0 (5) Complexity: 2 Complexity Density: 0.67
136	94	public List<MapListType.MapListTo> getMapListTo() {...
137	94	if (mapListTo == null) {
138	2	mapListTo = new ArrayList<MapListType.MapListTo>();
139		}
140	94	return this.mapListTo;
141		}
142
143		/**
144		* Gets the value of the mapFromUnit property.
145		*
146		* @return
147		* possible object is
148		* {@link BigInteger }
149		*
150		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
151	46	public BigInteger getMapFromUnit() {...
152	46	return mapFromUnit;
153		}
154
155		/**
156		* Sets the value of the mapFromUnit property.
157		*
158		* @param value
159		* allowed object is
160		* {@link BigInteger }
161		*
162		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
163	2	public void setMapFromUnit(BigInteger value) {...
164	2	this.mapFromUnit = value;
165		}
166
167		/**
168		* Gets the value of the mapToUnit property.
169		*
170		* @return
171		* possible object is
172		* {@link BigInteger }
173		*
174		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
175	46	public BigInteger getMapToUnit() {...
176	46	return mapToUnit;
177		}
178
179		/**
180		* Sets the value of the mapToUnit property.
181		*
182		* @param value
183		* allowed object is
184		* {@link BigInteger }
185		*
186		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
187	2	public void setMapToUnit(BigInteger value) {...
188	2	this.mapToUnit = value;
189		}
190
191
192		/**
193		* <p>Java class for anonymous complex type.
194		*
195		* <p>The following schema fragment specifies the expected content contained within this class.
196		*
197		* <pre>
198		* &lt;complexType>
199		* &lt;complexContent>
200		* &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
201		* &lt;attribute name="start" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
202		* &lt;attribute name="end" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
203		* &lt;/restriction>
204		* &lt;/complexContent>
205		* &lt;/complexType>
206		* </pre>
207		*
208		*
209		*/
210		@XmlAccessorType(XmlAccessType.FIELD)
211		@XmlType(name = "")
		100% Uncovered Elements: 0 (8) Complexity: 4 Complexity Density: 1
212		public static class MapListFrom {
213
214		@XmlAttribute(name = "start", required = true)
215		protected int start;
216		@XmlAttribute(name = "end", required = true)
217		protected int end;
218
219		/**
220		* Gets the value of the start property.
221		*
222		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
223	46	public int getStart() {...
224	46	return start;
225		}
226
227		/**
228		* Sets the value of the start property.
229		*
230		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
231	2	public void setStart(int value) {...
232	2	this.start = value;
233		}
234
235		/**
236		* Gets the value of the end property.
237		*
238		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
239	46	public int getEnd() {...
240	46	return end;
241		}
242
243		/**
244		* Sets the value of the end property.
245		*
246		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
247	2	public void setEnd(int value) {...
248	2	this.end = value;
249		}
250
251		}
252
253
254		/**
255		* <p>Java class for anonymous complex type.
256		*
257		* <p>The following schema fragment specifies the expected content contained within this class.
258		*
259		* <pre>
260		* &lt;complexType>
261		* &lt;complexContent>
262		* &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
263		* &lt;attribute name="start" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
264		* &lt;attribute name="end" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
265		* &lt;/restriction>
266		* &lt;/complexContent>
267		* &lt;/complexType>
268		* </pre>
269		*
270		*
271		*/
272		@XmlAccessorType(XmlAccessType.FIELD)
273		@XmlType(name = "")
		100% Uncovered Elements: 0 (8) Complexity: 4 Complexity Density: 1
274		public static class MapListTo {
275
276		@XmlAttribute(name = "start", required = true)
277		protected int start;
278		@XmlAttribute(name = "end", required = true)
279		protected int end;
280
281		/**
282		* Gets the value of the start property.
283		*
284		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
285	267	public int getStart() {...
286	267	return start;
287		}
288
289		/**
290		* Sets the value of the start property.
291		*
292		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
293	2	public void setStart(int value) {...
294	2	this.start = value;
295		}
296
297		/**
298		* Gets the value of the end property.
299		*
300		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
301	267	public int getEnd() {...
302	267	return end;
303		}
304
305		/**
306		* Sets the value of the end property.
307		*
308		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
309	2	public void setEnd(int value) {...
310	2	this.end = value;
311		}
312
313		}
314
315		}