Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
BackupFilesPresetEntry	30	48	14	0.911764791.2%	Show methods

Class BackupFilesPresetEntry

Class BackupFilesPresetEntry	Line # 30	Total Statements 48	Complexity 14	TOTAL Coverage 0.911764791.2%
BackupFilesPresetEntry(String,int,boolean,boolean,int,boolean)   BackupFilesPresetEntry(String,int,boolean,boolean,int,boolean)	6363	6.06	6.06	0.8125 0.812581.2%
equals(BackupFilesPresetEntry) : boolean   equals(BackupFilesPresetEntry) : boolean	7676	1.01	1.01	0.0 0.00%
toString() : String   toString() : String	8484	13.013	1.01	1.0 1.0100%
createBackupFilesPresetEntry(String) : BackupFilesPresetEntry   createBackupFilesPresetEntry(String) : BackupFilesPresetEntry	102102	18.018	3.03	0.95 0.9595%
getSavedBackupEntry() : BackupFilesPresetEntry   getSavedBackupEntry() : BackupFilesPresetEntry	134134	5.05	2.02	1.0 1.0100%
<init>, line 176()   <init>, line 176()	176176	5.05	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	0.85294116	jalview.io.BackupFilesTest.backupsEnabledNoRollMaxTestjalview.io.BackupFilesTest.backupsEnabledNoRollMaxTest	1PASS
	0.7352941	jalview.io.BackupFilesTest.backupsEnabledReverseRollMaxTestjalview.io.BackupFilesTest.backupsEnabledReverseRollMaxTest	1PASS
	0.7352941	jalview.io.BackupFilesTest.noBackupsEnabledTestjalview.io.BackupFilesTest.noBackupsEnabledTest	1PASS
	0.7352941	jalview.io.BackupFilesTest.backupsEnabledRollMaxTestjalview.io.BackupFilesTest.backupsEnabledRollMaxTest	1PASS
	0.5294118	jalview.project.Jalview2xmlTests.testSaveLoadFeatureColoursAndFiltersjalview.project.Jalview2xmlTests.testSaveLoadFeatureColoursAndFilters	1PASS
	0.5294118	jalview.project.Jalview2xmlTests.testRNAStructureRecoveryjalview.project.Jalview2xmlTests.testRNAStructureRecovery	1PASS
	0.5294118	jalview.project.Jalview2xmlTests.testTCoffeeScoresjalview.project.Jalview2xmlTests.testTCoffeeScores	1PASS
	0.5294118	jalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotationjalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotation	1PASS
	0.5294118	jalview.project.Jalview2xmlTests.testColourByAnnotScoresjalview.project.Jalview2xmlTests.testColourByAnnotScores	1PASS

 

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.io;
22
23		import jalview.bin.Cache;
24		import jalview.util.MessageManager;
25
26		import java.util.HashMap;
27		import java.util.Map;
28		import java.util.StringTokenizer;
29
		91.2% Uncovered Elements: 6 (68) Complexity: 14 Complexity Density: 0.29
30		public class BackupFilesPresetEntry
31		{
32
33		public String suffix;
34
35		public static final int DIGITSMIN = 1;
36
37		public static final int DIGITSMAX = 6;
38
39		public int digits;
40
41		public boolean reverse;
42
43		public boolean keepAll;
44
45		public static final int ROLLMAXMIN = 1;
46
47		public static final int ROLLMAXMAX = 999;
48
49		public int rollMax;
50
51		public boolean confirmDelete;
52
53		public static final String SAVEDCONFIG = BackupFiles.NS + "_SAVED";
54
55		public static final String CUSTOMCONFIG = BackupFiles.NS + "_CUSTOM";
56
57		private static final String stringDelim = "\t";
58
59		public static final int BACKUPFILESSCHEMECUSTOM = 0;
60
61		public static final int BACKUPFILESSCHEMEDEFAULT = 1;
62
		81.2% Uncovered Elements: 3 (16) Complexity: 6 Complexity Density: 1
63	165	public BackupFilesPresetEntry(String suffix, int digits, boolean reverse,...
64		boolean keepAll, int rollMax, boolean confirmDelete)
65		{
66	165	this.suffix = suffix == null ? "" : suffix;
67	165	this.digits = digits < DIGITSMIN ? DIGITSMIN
68	156	: (digits > DIGITSMAX ? DIGITSMAX : digits);
69	165	this.reverse = reverse;
70	165	this.keepAll = keepAll;
71	165	this.rollMax = rollMax < ROLLMAXMIN ? ROLLMAXMIN
72	156	: (rollMax > ROLLMAXMAX ? ROLLMAXMAX : rollMax);
73	165	this.confirmDelete = confirmDelete;
74		}
75
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
76	0	public boolean equals(BackupFilesPresetEntry compare)...
77		{
78	0	return suffix.equals(compare.suffix) && digits == compare.digits
79		&& reverse == compare.reverse && keepAll == compare.keepAll
80		&& rollMax == compare.rollMax
81		&& confirmDelete == compare.confirmDelete;
82		}
83
		100% Uncovered Elements: 0 (13) Complexity: 1 Complexity Density: 0.08
84	4	@Override...
85		public String toString()
86		{
87	4	StringBuilder sb = new StringBuilder();
88	4	sb.append(suffix);
89	4	sb.append(stringDelim);
90	4	sb.append(digits);
91	4	sb.append(stringDelim);
92	4	sb.append(reverse);
93	4	sb.append(stringDelim);
94	4	sb.append(keepAll);
95	4	sb.append(stringDelim);
96	4	sb.append(rollMax);
97	4	sb.append(stringDelim);
98	4	sb.append(confirmDelete);
99	4	return sb.toString();
100		}
101
		95% Uncovered Elements: 1 (20) Complexity: 3 Complexity Density: 0.17
102	140	public static BackupFilesPresetEntry createBackupFilesPresetEntry(...
103		String line)
104		{
105	140	if (line == null)
106		{
107	24	return null;
108		}
109	116	StringTokenizer st = new StringTokenizer(line, stringDelim);
110	116	String suffix = null;
111	116	int digits = 0;
112	116	boolean reverse = false;
113	116	boolean keepAll = false;
114	116	int rollMax = 0;
115	116	boolean confirmDelete = false;
116
117	116	try
118		{
119	116	suffix = st.nextToken();
120	116	digits = Integer.valueOf(st.nextToken());
121	116	reverse = Boolean.valueOf(st.nextToken());
122	116	keepAll = Boolean.valueOf(st.nextToken());
123	116	rollMax = Integer.valueOf(st.nextToken());
124	116	confirmDelete = Boolean.valueOf(st.nextToken());
125		} catch (Exception e)
126		{
127	0	Cache.log.error("Error parsing backupfiles scheme '" + line + "'");
128		}
129
130	116	return new BackupFilesPresetEntry(suffix, digits, reverse, keepAll,
131		rollMax, confirmDelete);
132		}
133
		100% Uncovered Elements: 0 (7) Complexity: 2 Complexity Density: 0.4
134	140	public static BackupFilesPresetEntry getSavedBackupEntry()...
135		{
136	140	String savedPresetString = Cache
137		.getDefault(BackupFilesPresetEntry.SAVEDCONFIG, null);
138	140	BackupFilesPresetEntry savedPreset = BackupFilesPresetEntry
139		.createBackupFilesPresetEntry(savedPresetString);
140	140	if (savedPreset == null)
141		{
142	24	savedPreset = backupfilesPresetEntriesValues
143		.get(BACKUPFILESSCHEMEDEFAULT);
144		}
145	140	return savedPreset;
146		}
147
148		public static final IntKeyStringValueEntry[] backupfilesPresetEntries = {
149		new IntKeyStringValueEntry(BACKUPFILESSCHEMEDEFAULT,
150		MessageManager.getString("label.default")),
151		new IntKeyStringValueEntry(2,
152		MessageManager.getString("label.single_file")),
153		new IntKeyStringValueEntry(3,
154		MessageManager.getString("label.keep_all_versions")),
155		new IntKeyStringValueEntry(4,
156		MessageManager.getString("label.rolled_backups")),
157		// ...
158		// IMPORTANT, keep "Custom" entry with key 0 (even though it appears last)
159		new IntKeyStringValueEntry(BACKUPFILESSCHEMECUSTOM,
160		MessageManager.getString("label.custom")) };
161
162		public static final String[] backupfilesPresetEntryDescriptions = {
163		MessageManager.getString("label.default_description"),
164		MessageManager.getString("label.single_file_description"),
165		MessageManager.getString("label.keep_all_versions_description"),
166		MessageManager.getString("label.rolled_backups_description"),
167		MessageManager.getString("label.custom_description") };
168
169		public static final Map<Integer, BackupFilesPresetEntry> backupfilesPresetEntriesValues = new HashMap<Integer, BackupFilesPresetEntry>()
170		{
171		/**
172		*
173		*/
174		private static final long serialVersionUID = 125L;
175
		100% Uncovered Elements: 0 (5) Complexity: 1 Complexity Density: 0.2
176	9	{...
177	9	put(1, new BackupFilesPresetEntry(
178		".bak" + BackupFiles.NUM_PLACEHOLDER, 3, false, false, 3,
179		false));
180	9	put(2, new BackupFilesPresetEntry("~", 1, false, false, 1, false));
181	9	put(3, new BackupFilesPresetEntry(".v" + BackupFiles.NUM_PLACEHOLDER,
182		3, false, true, 10, true));
183	9	put(4, new BackupFilesPresetEntry(
184		"_bak." + BackupFiles.NUM_PLACEHOLDER, 1, true, false, 9,
185		false));
186
187		// This gets replaced by GPreferences
188	9	put(BACKUPFILESSCHEMECUSTOM,
189		new BackupFilesPresetEntry("", 0, false, false, 0, false));
190		}
191		};
192
193		}