Clover icon

Coverage Report

  1. Project Clover database Wed Jan 14 2026 14:33:33 GMT
  2. Package jalview.ws.params

File ParamDatastoreI.java

 

Coverage histogram

../../../img/srcFileCovDistChart10.png
0% of files have more coverage

Code metrics

0
4
2
1
112
30
2
0.5
2
2
1

Classes

Class Line # Actions
ParamDatastoreI 26 4 2
1.0100%
 

Contributing tests

This file is covered by 343 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package jalview.ws.params;
22   
23    import java.io.IOException;
24    import java.util.List;
25   
 
26    public interface ParamDatastoreI
27    {
28   
29    public List<WsParamSetI> getPresets();
30   
31    public WsParamSetI getPreset(String name);
32   
33    /**
34    * Returns if the service has presets.
35    * @return {@code true} if service has presets
36    */
 
37  27170 toggle public default boolean hasPresets()
38    {
39  27170 var presets = getPresets();
40  27170 return presets != null && presets.size() > 0;
41    }
42   
43    public List<ArgumentI> getServiceParameters();
44   
45    /**
46    * Returns if the service has parameters.
47    * @return {@code true} if service has parameters
48    */
 
49  150046 toggle public default boolean hasParameters()
50    {
51  150046 var parameters = getServiceParameters();
52  150046 return parameters != null && parameters.size() > 0;
53    }
54   
55    public boolean presetExists(String name);
56   
57    public void deletePreset(String name);
58   
59    /**
60    * writes or overwrites the record for a modifiable WsParamSetI entry with a
61    * given name in the datastore.
62    *
63    * @param presetName
64    * @param text
65    * @param jobParams
66    * may throw an illegal argument RunTimeException if the presetName
67    * overwrites an existing, unmodifiable preset.
68    */
69    public void storePreset(String presetName, String text,
70    List<ArgumentI> jobParams);
71   
72    /**
73    * update an existing instance with a new name, descriptive text and
74    * parameters.
75    *
76    * @param oldName
77    * @param presetName
78    * @param text
79    * @param jobParams
80    */
81    public void updatePreset(String oldName, String presetName, String text,
82    List<ArgumentI> jobParams);
83   
84    /**
85    * factory method - builds a service specific parameter object using the given
86    * data
87    *
88    * @param name
89    * @param description
90    * @param applicable
91    * URLs
92    * @param parameterfile
93    * Service specific jalview parameter file (as returned from new
94    * method)
95    * @return null or valid WsParamSetI object for this service.
96    */
97   
98    public WsParamSetI parseServiceParameterFile(String name,
99    String description, String[] serviceURL, String parameters)
100    throws IOException;
101   
102    /**
103    * create the service specific parameter file for this pset object.
104    *
105    * @param pset
106    * @return string representation of the parameters specified by this set.
107    * @throws IOException
108    */
109    public String generateServiceParameterFile(WsParamSetI pset)
110    throws IOException;
111   
112    }
  • Report generated by OpenClover v 4.4.1 on Wed Jan 14 2026 14:41:35 GMT using coverage data from Wed Jan 14 2026 14:41:24 GMT.
  • OpenClover is free and open-source software.