Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
JobStateSummary	35	48	18	0.3827160638.3%	Show methods

Class JobStateSummary

Class JobStateSummary	Line # 35	Total Statements 48	Complexity 18	TOTAL Coverage 0.3827160638.3%
updateJobPanelState(WebserviceInfo,String,AWsJob) : void   updateJobPanelState(WebserviceInfo,String,AWsJob) : void	8080	48.048	18.018	0.375 0.37537.5%

 

Contributing tests

Contributing tests

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	Test contribution	Test	Result	Actions
	0.38271606	jalview.ws2.actions.alignment.AlignmentActionListenerNotifiedTest.jobStatusChanged_taskStatusChangedCalledWithJobStatusjalview.ws2.actions.alignment.AlignmentActionListenerNotifiedTest.jobStatusChanged_taskStatusChangedCalledWithJobStatus	1PASS

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.ws;
22
23		import jalview.gui.WebserviceInfo;
24
25		/**
26		* bookkeeper class for the WebServiceInfo GUI, maintaining records of web
27		* service jobs handled by the window and reflecting any status updates.
28		*
29		* TODO: separate from the GUI cleanly since it also holds logic for
30		* interpreting failure states
31		*
32		* @author JimP
33		*
34		*/
		38.3% Uncovered Elements: 50 (81) Complexity: 18 Complexity Density: 0.38
35		public class JobStateSummary
36		{
37		/**
38		* number of jobs running
39		*/
40		int running = 0;
41
42		/**
43		* number of jobs queued
44		*/
45		int queuing = 0;
46
47		/**
48		* number of jobs finished
49		*/
50		int finished = 0;
51
52		/**
53		* number of jobs failed
54		*/
55		int error = 0;
56
57		/**
58		* number of jobs stopped due to server error
59		*/
60		int serror = 0;
61
62		/**
63		* number of jobs cancelled
64		*/
65		int cancelled = 0;
66
67		/**
68		* number of jobs finished with results
69		*/
70		int results = 0;
71
72		/**
73		* processes an AWSJob's status and updates job status counters and WebService
74		* status displays
75		*
76		* @param wsInfo
77		* @param OutputHeader
78		* @param j
79		*/
		37.5% Uncovered Elements: 50 (80) Complexity: 18 Complexity Density: 0.38
80	1	public void updateJobPanelState(WebserviceInfo wsInfo,...
81		String OutputHeader, AWsJob j)
82		{
83	1	if (j.cancelled)
84		{
85	0	cancelled++;
86	0	j.subjobComplete = true;
87	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_CANCELLED_OK);
88	0	return;
89		}
90	1	if (j.submitted)
91		{
92	1	String progheader = "";
93		// Parse state of job[j]
94	1	if (j.isRunning())
95		{
96	0	running++;
97	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_RUNNING);
98		}
99	1	else if (j.isQueued())
100		{
101	0	queuing++;
102	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_QUEUING);
103		}
104	1	else if (j.isFinished())
105		{
106	0	finished++;
107	0	j.subjobComplete = true;
108	0	if (j.hasResults())
109		{
110	0	results++;
111		}
112	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_STOPPED_OK);
113		}
114	1	else if (j.isFailed())
115		{
116	0	progheader += "Job failed.\n";
117	0	j.subjobComplete = true;
118	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_STOPPED_ERROR);
119	0	error++;
120		}
121	1	else if (j.isServerError())
122		{
123	0	serror++;
124	0	j.subjobComplete = true;
125	0	wsInfo.setStatus(j.jobnum,
126		WebserviceInfo.STATE_STOPPED_SERVERERROR);
127		}
128	1	else if (j.isBroken())
129		{
130	0	progheader += "Job was broken.\n";
131	0	error++;
132	0	j.subjobComplete = true;
133	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_STOPPED_ERROR);
134		}
135		// and pass on any sub-job messages to the user
136	1	StringBuffer output = new StringBuffer();
137	1	if (OutputHeader != null)
138		{
139
140	0	output.append(OutputHeader);
141		}
142	1	if (progheader != null)
143		{
144	1	output.append(progheader);
145		}
146	1	if (j.hasStatus())
147		{
148		// Could try to squash OOMs here, but it usually doesn't help - there
149		// probably won't be
150		// enough memory to handle the results later on anyway.
151		// try {
152	1	String stat = j.getStatus();
153	1	if (stat != null)
154		{
155	1	output.append(stat);
156		}
157		// } catch (OutOfMemoryError e)
158		// {
159		// jalview.bin.Console.errPrintln("Out of memory when displaying status.
160		// Squashing
161		// error.");
162		// wsInfo.appendProgressText(j.jobnum,
163		// "..\n(Out of memory when displaying status)\n");
164		// }
165		}
166	1	wsInfo.setProgressText(j.jobnum, output.toString());
167		}
168		else
169		{
170	0	if (j.submitted && j.subjobComplete)
171		{
172	0	if (j.allowedServerExceptions == 0)
173		{
174	0	serror++;
175		}
176	0	else if (!j.hasResults())
177		{
178	0	error++;
179		}
180		}
181		}
182		}
183		}