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Coverage Report

  1. Project Clover database Wed Dec 3 2025 17:03:17 GMT

Project overview

 

Code metrics

45,048
121,135
17,816
1,607
1,270
135
460,412
290,866
49,496
0.41
6.8
11.09
11.9
2.78
Project
Clover database Wed Dec 3 2025 17:03:17 GMT Clover database Wed Dec 3 2025 17:03:17 GMT 135.0 135 2.778177 2.78 0.40891525
0.4089152540.9%
 
Metrics from sub-packages:

Separated Aggregated

Package (aggregated)
uk.ac.ebi.www.picr.AccessionMappingService uk.ac.ebi.www.picr.AccessionMappingService 1.0 1 2.2608695 2.26 0.0
0.00%
uk.ac uk.ac 3.0 3 1.8311689 1.83 0.0
0.00%
jalview.fts.service.alphafold jalview.fts.service.alphafold 1.0 1 2.8333333 2.83 0.0
0.00%
jalview.ws2.actions.api jalview.ws2.actions.api 1.0 1 1.125 1.12 0.0
0.00%
swingjs.api swingjs.api 2.0 2 1.8387097 1.84 0.0
0.00%
jalview.appletgui jalview.appletgui 2.0 2 3.374062 3.37 0.0
0.00%
darrylbu darrylbu 1.0 1 2.7222223 2.72 0.0
0.00%
jalview.util.dialogrunner jalview.util.dialogrunner 1.0 1 1.0 1 0.0
0.00%
jalview.ws.jws2.dm jalview.ws.jws2.dm 1.0 1 1.4324324 1.43 0.0
0.00%
uk.ac.ebi uk.ac.ebi 3.0 3 1.8311689 1.83 0.0
0.00%
ext.edu ext.edu 2.0 2 2.597015 2.6 0.0
0.00%
jalview.io.exceptions jalview.io.exceptions 1.0 1 1.0 1 0.0
0.00%
jalview.exceptions jalview.exceptions 1.0 1 1.0 1 0.0
0.00%
org.stackoverflowusers.file org.stackoverflowusers.file 1.0 1 1.8333334 1.83 0.0
0.00%
jalview.bin.groovy jalview.bin.groovy 1.0 1 1.75 1.75 0.0
0.00%
jalview.httpserver jalview.httpserver 1.0 1 1.8125 1.81 0.0
0.00%
jalview.ws.io jalview.ws.io 1.0 1 1.2222222 1.22 0.0
0.00%
jalview.javascript jalview.javascript 2.0 2 1.5294118 1.53 0.0
0.00%
swingjs.api.js swingjs.api.js 1.0 1 1.7833333 1.78 0.0
0.00%
jalview.appletgui.js jalview.appletgui.js 1.0 1 3.92 3.92 0.0
0.00%
jalview.javascript.json jalview.javascript.json 1.0 1 1.0 1 0.0
0.00%
jalview.ws.io.mime jalview.ws.io.mime 1.0 1 1.2222222 1.22 0.0
0.00%
uk.ac.ebi.picr.model uk.ac.ebi.picr.model 1.0 1 1.62 1.62 0.0
0.00%
vamsas.objects vamsas.objects 1.0 1 1.6068965 1.61 0.0
0.00%
jalview.io.packed jalview.io.packed 1.0 1 2.6785715 2.68 0.0
0.00%
jalview.ext.paradise jalview.ext.paradise 1.0 1 1.2 1.2 0.0
0.00%
uk.ac.ebi.picr uk.ac.ebi.picr 1.0 1 1.62 1.62 0.0
0.00%
uk.ac.ebi.www.picr uk.ac.ebi.www.picr 1.0 1 2.2608695 2.26 0.0
0.00%
ext.edu.ucsf.rbvi.strucviz2.port ext.edu.ucsf.rbvi.strucviz2.port 1.0 1 3.0769231 3.08 0.0
0.00%
ext.edu.ucsf.rbvi ext.edu.ucsf.rbvi 2.0 2 2.597015 2.6 0.0
0.00%
jalview.rest jalview.rest 1.0 1 1.25 1.25 0.0
0.00%
vamsas.objects.simple vamsas.objects.simple 1.0 1 1.6068965 1.61 0.0
0.00%
jalview.ws.slivkaws jalview.ws.slivkaws 1.0 1 2.2592592 2.26 0.0
0.00%
org.stackoverflowusers org.stackoverflowusers 1.0 1 1.8333334 1.83 0.0
0.00%
jalview.api.structures jalview.api.structures 1.0 1 1.0 1 0.0
0.00%
ext.edu.ucsf.rbvi.strucviz2 ext.edu.ucsf.rbvi.strucviz2 2.0 2 2.597015 2.6 0.0
0.00%
swingjs swingjs 2.0 2 1.8387097 1.84 0.0
0.00%
ext.edu.ucsf ext.edu.ucsf 2.0 2 2.597015 2.6 0.0
0.00%
uk uk 3.0 3 1.8311689 1.83 0.0
0.00%
jalview.fts.service.uniprot jalview.fts.service.uniprot 1.0 1 2.6585367 2.66 0.0
0.00%
darrylbu.util darrylbu.util 1.0 1 2.7222223 2.72 0.0
0.00%
jalview.io.vamsas jalview.io.vamsas 1.0 1 3.4782608 3.48 0.0
0.00%
vamsas vamsas 2.0 2 1.6068965 1.61 0.0
0.00%
jalview.ext.varna jalview.ext.varna 1.0 1 7.3333335 7.33 0.0
0.00%
jalview.javascript.web jalview.javascript.web 1.0 1 1.75 1.75 0.0
0.00%
uk.ac.ebi.www uk.ac.ebi.www 2.0 2 1.9326923 1.93 0.0
0.00%
jalview.hmmer jalview.hmmer 1.0 1 3.1232877 3.12 0.0028248588
0.00282485880.3%
jalview.ws.gui jalview.ws.gui 1.0 1 2.828125 2.83 0.0031796503
0.00317965030.3%
jalview.xml.binding.sifts jalview.xml.binding.sifts 1.0 1 1.0746269 1.07 0.0032467532
0.00324675320.3%
ext ext 3.0 3 2.436137 2.44 0.015590895
0.0155908951.6%
ext.vamsas ext.vamsas 1.0 1 2.1666667 2.17 0.03849115
0.038491153.8%
javajs.async javajs.async 1.0 1 2.2307692 2.23 0.044132397
0.0441323974.4%
javajs javajs 1.0 1 2.2307692 2.23 0.044132397
0.0441323974.4%
jalview.ws.jws1 jalview.ws.jws1 1.0 1 3.3615384 3.36 0.052247874
0.0522478745.2%
jalview.ws2.params jalview.ws2.params 1.0 1 1.44 1.44 0.06557377
0.065573776.6%
jalview.xml.binding.uniprot jalview.xml.binding.uniprot 1.0 1 1.2043269 1.2 0.07514945
0.075149457.5%
jalview.ws.sifts jalview.ws.sifts 1.0 1 2.2 2.2 0.082442746
0.0824427468.2%
com.stevesoft.pat.wrap com.stevesoft.pat.wrap 1.0 1 1.4166666 1.42 0.105882354
0.10588235410.6%
jalview.api jalview.api 3.0 3 1.0 1 0.11764706
0.1176470611.8%
jalview.ws.jws2.jabaws2 jalview.ws.jws2.jabaws2 1.0 1 3.4074075 3.41 0.12083333
0.1208333312.1%
jalview.ws2.actions.hmmer jalview.ws2.actions.hmmer 1.0 1 1.5833334 1.58 0.14666666
0.1466666614.7%
junit.extensions junit.extensions 1.0 1 2.3 2.3 0.15120275
0.1512027515.1%
junit junit 1.0 1 2.3 2.3 0.15120275
0.1512027515.1%
com com 3.0 3 4.845554 4.85 0.15671521
0.1567152115.7%
com.stevesoft.pat com.stevesoft.pat 2.0 2 4.845554 4.85 0.15671521
0.1567152115.7%
com.stevesoft com.stevesoft 2.0 2 4.845554 4.85 0.15671521
0.1567152115.7%
jalview.xml.binding.embl jalview.xml.binding.embl 1.0 1 1.1132076 1.11 0.17994858
0.1799485818%
jalview.ext.ensembl jalview.ext.ensembl 1.0 1 2.0677083 2.07 0.19192635
0.1919263519.2%
mc_view mc_view 1.0 1 4.016 4.02 0.19545859
0.1954585919.5%
org.json org.json 3.0 3 3.8202531 3.82 0.20248018
0.2024801820.2%
jalview.ws.seqfetcher jalview.ws.seqfetcher 1.0 1 2.7083333 2.71 0.21755725
0.2175572521.8%
jalview.ws.jws2 jalview.ws.jws2 3.0 3 3.0240965 3.02 0.22164948
0.2216494822.2%
org org 5.0 5 3.3281553 3.33 0.23134589
0.2313458923.1%
jalview.ws jalview.ws 22.0 22 2.622773 2.62 0.24540235
0.2454023524.5%
jalview.ws2.gui jalview.ws2.gui 1.0 1 3.680851 3.68 0.25662482
0.2566248225.7%
jalview.ws2.actions.annotation jalview.ws2.actions.annotation 1.0 1 2.2045455 2.2 0.3084112
0.308411230.8%
org.json.simple org.json.simple 2.0 2 3.4234235 3.42 0.3138848
0.313884831.4%
jalview.fts.service jalview.fts.service 4.0 4 2.626087 2.63 0.32152346
0.3215234632.2%
jalview.ext.rbvi.chimera jalview.ext.rbvi.chimera 1.0 1 1.8414634 1.84 0.32920355
0.3292035532.9%
jalview.ext.rbvi jalview.ext.rbvi 1.0 1 1.8414634 1.84 0.32920355
0.3292035532.9%
jalview.gui jalview.gui 2.0 2 2.8820446 2.88 0.34347278
0.3434727834.3%
jalview.ws.params jalview.ws.params 2.0 2 1.4565217 1.46 0.34653464
0.3465346434.7%
jalview.ws.rest.params jalview.ws.rest.params 1.0 1 2.2444444 2.24 0.35805628
0.3580562835.8%
jalview.ws.rest jalview.ws.rest 3.0 3 2.7631578 2.76 0.36916837
0.3691683736.9%
jalview.ws2.helpers jalview.ws2.helpers 1.0 1 1.1428572 1.14 0.39130434
0.3913043439.1%
jalview.ws.params.simple jalview.ws.params.simple 1.0 1 1.45 1.45 0.39764705
0.3976470539.8%
jalview.ext jalview.ext 9.0 9 2.295956 2.3 0.402747
0.40274740.3%
jalview.ws.ebi jalview.ws.ebi 1.0 1 3.9565217 3.96 0.40519482
0.4051948240.5%
jalview.xml.binding jalview.xml.binding 4.0 4 1.1316923 1.13 0.40779537
0.4077953740.8%
jalview.xml jalview.xml 4.0 4 1.1316923 1.13 0.40779537
0.4077953740.8%
jalview.ws.dbsources jalview.ws.dbsources 1.0 1 2.5481927 2.55 0.41575342
0.4157534241.6%
jalview.bin jalview.bin 3.0 3 3.8167155 3.82 0.41584608
0.4158460841.6%
jalview.math jalview.math 1.0 1 3.0204082 3.02 0.42201835
0.4220183542.2%
jalview.controller jalview.controller 1.0 1 4.9333334 4.93 0.42711863
0.4271186342.7%
jalview.ws2.client.jpred4 jalview.ws2.client.jpred4 1.0 1 1.7222222 1.72 0.43269232
0.4326923243.3%
jalview.fts jalview.fts 6.0 6 2.289855 2.29 0.44592118
0.4459211844.6%
jalview.ext.pymol jalview.ext.pymol 1.0 1 2.3333333 2.33 0.4471831
0.447183144.7%
jalview.ws.api jalview.ws.api 1.0 1 1.4324324 1.43 0.45378152
0.4537815245.4%
jalview.ws2 jalview.ws2 14.0 14 2.0850575 2.09 0.4547605
0.454760545.5%
jalview jalview 112.0 112 2.703692 2.7 0.45570195
0.4557019545.6%
org.jibble.epsgraphics org.jibble.epsgraphics 1.0 1 1.6944444 1.69 0.4610028
0.461002846.1%
org.jibble org.jibble 1.0 1 1.6944444 1.69 0.4610028
0.461002846.1%
org.json.simple.parser org.json.simple.parser 1.0 1 4.5208335 4.52 0.46751592
0.4675159246.8%
jalview.ext.android jalview.ext.android 1.0 1 2.265625 2.27 0.47048903
0.4704890347%
jalview.api.analysis jalview.api.analysis 1.0 1 1.0 1 0.5
0.550%
jalview.testutils jalview.testutils 1.0 1 1.625 1.62 0.51428574
0.5142857451.4%
jalview.fts.service.threedbeacons jalview.fts.service.threedbeacons 1.0 1 2.2105262 2.21 0.5145631
0.514563151.5%
jalview.ws.uimodel jalview.ws.uimodel 1.0 1 1.0 1 0.52
0.5252%
jalview.ws2.client.ebi jalview.ws2.client.ebi 1.0 1 4.173913 4.17 0.5248869
0.524886952.5%
jalview.ws2.actions jalview.ws2.actions 6.0 6 1.7486911 1.75 0.53417265
0.5341726553.4%
jalview.util jalview.util 4.0 4 3.465649 3.47 0.5352613
0.535261353.5%
jalview.io jalview.io 7.0 7 3.858951 3.86 0.5459759
0.545975954.6%
jalview.fts.service.pdb jalview.fts.service.pdb 1.0 1 3.0666666 3.07 0.5483871
0.548387154.8%
jalview.jbgui jalview.jbgui 1.0 1 1.2620838 1.26 0.5609364
0.560936456.1%
jalview.log jalview.log 1.0 1 1.7446809 1.74 0.5613208
0.561320856.1%
jalview.ws2.client jalview.ws2.client 4.0 4 2.8222222 2.82 0.5706522
0.570652257.1%
jalview.ext.htsjdk jalview.ext.htsjdk 1.0 1 2.347826 2.35 0.5792683
0.579268357.9%
jalview.fts.core jalview.fts.core 1.0 1 2.0496895 2.05 0.57929724
0.5792972457.9%
jalview.structure jalview.structure 1.0 1 2.6493506 2.65 0.5830462
0.583046258.3%
jalview.workers jalview.workers 1.0 1 2.4454546 2.45 0.5832402
0.583240258.3%
jalview.datamodel.annotations jalview.datamodel.annotations 1.0 1 1.1904762 1.19 0.5882353
0.588235358.8%
jalview.ws2.client.slivka jalview.ws2.client.slivka 1.0 1 2.6944444 2.69 0.5911111
0.591111159.1%
jalview.commands jalview.commands 1.0 1 4.4492755 4.45 0.59764916
0.5976491659.8%
jalview.renderer.seqfeatures jalview.renderer.seqfeatures 1.0 1 7.0 7 0.6044304
0.604430460.4%
jalview.ext.jmol jalview.ext.jmol 1.0 1 3.0086956 3.01 0.6120034
0.612003461.2%
jalview.structures.models jalview.structures.models 1.0 1 3.0705884 3.07 0.625
0.62562.5%
jalview.structures jalview.structures 1.0 1 3.0705884 3.07 0.625
0.62562.5%
jalview.bin.argparser jalview.bin.argparser 1.0 1 3.0786026 3.08 0.6356011
0.635601163.6%
jalview.ws2.api jalview.ws2.api 1.0 1 1.3888888 1.39 0.6397059
0.639705964%
jalview.analytics jalview.analytics 1.0 1 2.8064516 2.81 0.663522
0.66352266.4%
jalview.renderer jalview.renderer 3.0 3 6.409091 6.41 0.6643324
0.664332466.4%
jalview.analysis jalview.analysis 2.0 2 4.241071 4.24 0.6897826
0.689782669%
jalview.io.vcf jalview.io.vcf 1.0 1 4.3714285 4.37 0.6992
0.699269.9%
jalview.io.cache jalview.io.cache 1.0 1 2.1333334 2.13 0.7048458
0.704845870.5%
jalview.gui.structurechooser jalview.gui.structurechooser 1.0 1 3.4363637 3.44 0.72129035
0.7212903572.1%
jalview.json.binding.biojs jalview.json.binding.biojs 1.0 1 1.125 1.12 0.73333335
0.7333333573.3%
jalview.project jalview.project 1.0 1 6.730769 6.73 0.7496974
0.749697475%
jalview.json.binding jalview.json.binding 2.0 2 1.2170542 1.22 0.75
0.7575%
jalview.json jalview.json 2.0 2 1.2170542 1.22 0.75
0.7575%
jalview.ws.utils jalview.ws.utils 1.0 1 1.3333334 1.33 0.75
0.7575%
jalview.json.binding.biojson jalview.json.binding.biojson 1.0 1 1.2300885 1.23 0.7526502
0.752650275.3%
jalview.json.binding.biojson.v1 jalview.json.binding.biojson.v1 1.0 1 1.2300885 1.23 0.7526502
0.752650275.3%
jalview.datamodel jalview.datamodel 3.0 3 2.7131617 2.71 0.7549827
0.754982775.5%
jalview.ws2.actions.secstructpred jalview.ws2.actions.secstructpred 1.0 1 2.1578948 2.16 0.7554348
0.755434875.5%
jalview.analysis.scoremodels jalview.analysis.scoremodels 1.0 1 2.5444446 2.54 0.7827815
0.782781578.3%
jalview.ws.datamodel.alphafold jalview.ws.datamodel.alphafold 1.0 1 2.725 2.72 0.78409094
0.7840909478.4%
jalview.ws.datamodel jalview.ws.datamodel 2.0 2 2.725 2.72 0.78409094
0.7840909478.4%
jalview.xml.binding.jalview jalview.xml.binding.jalview 1.0 1 1.1163683 1.12 0.78486264
0.7848626478.5%
jalview.viewmodel jalview.viewmodel 4.0 4 1.8104907 1.81 0.79544765
0.7954476579.5%
jalview.ws2.client.api jalview.ws2.client.api 1.0 1 2.3076923 2.31 0.8055556
0.805555680.6%
jalview.ws2.actions.alignment jalview.ws2.actions.alignment 1.0 1 2.173913 2.17 0.8088235
0.808823580.9%
jalview.viewmodel.seqfeatures jalview.viewmodel.seqfeatures 1.0 1 2.9041095 2.9 0.8307906
0.830790683.1%
jalview.ext.so jalview.ext.so 1.0 1 2.6111112 2.61 0.85
0.8585%
jalview.schemes jalview.schemes 1.0 1 2.139881 2.14 0.8645081
0.864508186.5%
jalview.urls jalview.urls 4.0 4 1.8526316 1.85 0.8851913
0.885191388.5%
jalview.io.gff jalview.io.gff 1.0 1 4.0 4 0.8865132
0.886513288.7%
jalview.util.imagemaker jalview.util.imagemaker 1.0 1 1.2727273 1.27 0.9354839
0.935483993.5%
jalview.datamodel.features jalview.datamodel.features 1.0 1 2.8446603 2.84 0.94223106
0.9422310694.2%
jalview.util.matcher jalview.util.matcher 1.0 1 2.8947368 2.89 0.96666664
0.9666666496.7%
net.meyfa net.meyfa 1.0 1 1.8 1.8 0.98734176
0.9873417698.7%
net net 1.0 1 1.8 1.8 0.98734176
0.9873417698.7%
net.meyfa.sha256 net.meyfa.sha256 1.0 1 1.8 1.8 0.98734176
0.9873417698.7%
jalview.viewmodel.annotationfilter jalview.viewmodel.annotationfilter 1.0 1 1.0 1 1.0
1.0100%
jalview.urls.applet jalview.urls.applet 1.0 1 1.0 1 1.0
1.0100%
jalview.ws.rest.clientdefs jalview.ws.rest.clientdefs 1.0 1 1.0 1 1.0
1.0100%
jalview.urls.desktop jalview.urls.desktop 1.0 1 1.0 1 1.0
1.0100%
jalview.viewmodel.styles jalview.viewmodel.styles 1.0 1 1.020202 1.02 1.0
1.0100%
  • Report generated by OpenClover v 4.4.1 on Wed Dec 3 2025 17:13:21 GMT using coverage data from Wed Dec 3 2025 17:13:06 GMT.
  • OpenClover is free and open-source software.