Class | Line # | Actions | |||
---|---|---|---|---|---|
DBRefFile | 34 | 1 | 2 |
1 | /* | |
2 | * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) | |
3 | * Copyright (C) $$Year-Rel$$ The Jalview Authors | |
4 | * | |
5 | * This file is part of Jalview. | |
6 | * | |
7 | * Jalview is free software: you can redistribute it and/or | |
8 | * modify it under the terms of the GNU General Public License | |
9 | * as published by the Free Software Foundation, either version 3 | |
10 | * of the License, or (at your option) any later version. | |
11 | * | |
12 | * Jalview is distributed in the hope that it will be useful, but | |
13 | * WITHOUT ANY WARRANTY; without even the implied warranty | |
14 | * of MERCHANTABILITY or FITNESS FOR A PARTICULAR | |
15 | * PURPOSE. See the GNU General Public License for more details. | |
16 | * | |
17 | * You should have received a copy of the GNU General Public License | |
18 | * along with Jalview. If not, see <http://www.gnu.org/licenses/>. | |
19 | * The Jalview Authors are detailed in the 'AUTHORS' file. | |
20 | */ | |
21 | package jalview.io; | |
22 | ||
23 | import jalview.datamodel.SequenceI; | |
24 | ||
25 | import java.io.IOException; | |
26 | ||
27 | /** | |
28 | * jalview flatfile for io of sequence ID mapping data | |
29 | * DATABASE\t<nickname>\t<name>\t<version>... properties?jdbc, url, handler | |
30 | * DBREF | |
31 | * <seqID>\tDBID\taccno\t|seqstart,seqend,start,end...|\t|dbstart,dbend,...| | |
32 | * | |
33 | */ | |
34 | public class DBRefFile extends AlignFile | |
35 | { | |
36 | ||
37 | 0 | @Override |
38 | public void parse() throws IOException | |
39 | { | |
40 | // TODO Auto-generated method stub | |
41 | ||
42 | } | |
43 | ||
44 | 0 | @Override |
45 | public String print(SequenceI[] sqs, boolean jvsuffix) | |
46 | { | |
47 | // TODO Auto-generated method stub | |
48 | 0 | return null; |
49 | } | |
50 | ||
51 | } |