Clover icon

Coverage Report

  1. Project Clover database Thu Nov 7 2024 13:01:17 GMT
  2. Package mc_view

File Bond.java

 

Coverage histogram

../img/srcFileCovDistChart10.png
0% of files have more coverage

Code metrics

0
12
2
1
82
29
2
0.17
6
2
1

Classes

Class Line # Actions
Bond 25 12 2
1.0100%
 

Contributing tests

This file is covered by 63 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package mc_view;
22   
23    import java.awt.Color;
24   
 
25    public class Bond
26    {
27    float[] start;
28   
29    float[] end;
30   
31    Color startCol = Color.lightGray;
32   
33    Color endCol = Color.lightGray;
34   
35    public Atom at1;
36   
37    public Atom at2;
38   
 
39  47857 toggle public Bond(Atom at1, Atom at2)
40    {
41  47857 this.start = new float[] { at1.x, at1.y, at1.z };
42  47857 this.end = new float[] { at2.x, at2.y, at2.z };
43  47857 this.startCol = at1.color;
44  47857 this.endCol = at2.color;
45  47857 this.at1 = at1;
46  47857 this.at2 = at2;
47    }
48   
49    /*
50    * public Bond(Bond bond) { this.start = new float[3];
51    *
52    * this.start[0] = bond.start[0]; this.start[1] = bond.start[1]; this.start[2]
53    * = bond.start[2];
54    *
55    * this.end = new float[3];
56    *
57    * this.end[0] = bond.end[0]; this.end[1] = bond.end[1]; this.end[2] =
58    * bond.end[2];
59    *
60    * this.startCol = bond.startCol; this.endCol = bond.endCol; }
61    *
62    * public float length() { float len = ((end[0] - start[0]) * (end[0] -
63    * start[0])) + ((end[1] - start[1]) * (end[1] - start[1])) + ((end[2] -
64    * start[2]) * (end[2] - start[2]));
65    *
66    * len = (float) (Math.sqrt(len));
67    *
68    * return len; }
69    */
70   
 
71  1 toggle public void translate(float x, float y, float z)
72    {
73  1 start[0] = start[0] + x;
74  1 end[0] = end[0] + x;
75   
76  1 start[1] = start[1] + y;
77  1 end[1] = end[1] + y;
78   
79  1 start[2] = start[2] + z;
80  1 end[2] = end[2] + z;
81    }
82    }
  • Report generated by OpenClover v 4.4.1 on Thu Nov 7 2024 13:08:41 GMT using coverage data from Thu Nov 7 2024 13:08:28 GMT.
  • OpenClover is free and open-source software.