Clover icon

Coverage Report

  1. Project Clover database Wed Nov 13 2024 16:21:17 GMT
  2. Package jalview.datamodel

File Profiles.java

 

Coverage histogram

../../img/srcFileCovDistChart8.png
20% of files have more coverage

Code metrics

4
6
5
1
71
33
9
1.5
1.2
5
1.8

Classes

Class Line # Actions
Profiles 23 6 9
0.880%
 

Contributing tests

This file is covered by 197 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package jalview.datamodel;
22   
 
23    public class Profiles implements ProfilesI
24    {
25    int sourceCount;
26   
27    private ProfileI[] profiles;
28   
 
29  1748 toggle public Profiles(int sourceCount, ProfileI[] p)
30    {
31  1748 this.sourceCount=sourceCount;
32  1748 profiles = p;
33    }
34   
35    /**
36    * Returns the profile for the given column, or null if none found
37    *
38    * @param col
39    */
 
40  880476 toggle @Override
41    public ProfileI get(int col)
42    {
43  880571 return profiles != null && col >= 0 && col < profiles.length
44    ? profiles[col]
45    : null;
46    }
47   
48    /**
49    * Returns the first column (base 0) covered by the profiles
50    */
 
51  1968 toggle @Override
52    public int getStartColumn()
53    {
54  1968 return 0;
55    }
56   
57    /**
58    * Returns the last column (base 0) covered by the profiles
59    */
 
60  1968 toggle @Override
61    public int getEndColumn()
62    {
63  1968 return profiles == null ? 0 : profiles.length - 1;
64    }
65   
 
66  0 toggle @Override
67    public int getCount()
68    {
69  0 return sourceCount;
70    }
71    }
  • Report generated by OpenClover v 4.4.1 on Wed Nov 13 2024 16:28:33 GMT using coverage data from Wed Nov 13 2024 16:28:18 GMT.
  • OpenClover is free and open-source software.