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jalviewX

  1. Project Clover database Wed Oct 31 2018 15:13:58 GMT
  2. Package uk.ac.ebi.picr.model

File UPEntry.java

 

Coverage histogram

../../../../../img/srcFileCovDistChart0.png
56% of files have more coverage

Code metrics

30
60
20
1
301
192
37
0.62
3
20
1.85

Classes

Class Line # Actions
UPEntry 23 60 37 110
0.00%
 

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1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package uk.ac.ebi.picr.model;
22   
 
23    public class UPEntry implements java.io.Serializable
24    {
25    private java.lang.String CRC64;
26   
27    private java.lang.String UPI;
28   
29    private uk.ac.ebi.picr.model.CrossReference[] identicalCrossReferences;
30   
31    private uk.ac.ebi.picr.model.CrossReference[] logicalCrossReferences;
32   
33    private java.lang.String sequence;
34   
35    private java.util.Calendar timestamp;
36   
 
37  0 toggle public UPEntry()
38    {
39    }
40   
 
41  0 toggle public UPEntry(java.lang.String CRC64, java.lang.String UPI,
42    uk.ac.ebi.picr.model.CrossReference[] identicalCrossReferences,
43    uk.ac.ebi.picr.model.CrossReference[] logicalCrossReferences,
44    java.lang.String sequence, java.util.Calendar timestamp)
45    {
46  0 this.CRC64 = CRC64;
47  0 this.UPI = UPI;
48  0 this.identicalCrossReferences = identicalCrossReferences;
49  0 this.logicalCrossReferences = logicalCrossReferences;
50  0 this.sequence = sequence;
51  0 this.timestamp = timestamp;
52    }
53   
54    /**
55    * Gets the CRC64 value for this UPEntry.
56    *
57    * @return CRC64
58    */
 
59  0 toggle public java.lang.String getCRC64()
60    {
61  0 return CRC64;
62    }
63   
64    /**
65    * Sets the CRC64 value for this UPEntry.
66    *
67    * @param CRC64
68    */
 
69  0 toggle public void setCRC64(java.lang.String CRC64)
70    {
71  0 this.CRC64 = CRC64;
72    }
73   
74    /**
75    * Gets the UPI value for this UPEntry.
76    *
77    * @return UPI
78    */
 
79  0 toggle public java.lang.String getUPI()
80    {
81  0 return UPI;
82    }
83   
84    /**
85    * Sets the UPI value for this UPEntry.
86    *
87    * @param UPI
88    */
 
89  0 toggle public void setUPI(java.lang.String UPI)
90    {
91  0 this.UPI = UPI;
92    }
93   
94    /**
95    * Gets the identicalCrossReferences value for this UPEntry.
96    *
97    * @return identicalCrossReferences
98    */
 
99  0 toggle public uk.ac.ebi.picr.model.CrossReference[] getIdenticalCrossReferences()
100    {
101  0 return identicalCrossReferences;
102    }
103   
104    /**
105    * Sets the identicalCrossReferences value for this UPEntry.
106    *
107    * @param identicalCrossReferences
108    */
 
109  0 toggle public void setIdenticalCrossReferences(
110    uk.ac.ebi.picr.model.CrossReference[] identicalCrossReferences)
111    {
112  0 this.identicalCrossReferences = identicalCrossReferences;
113    }
114   
 
115  0 toggle public uk.ac.ebi.picr.model.CrossReference getIdenticalCrossReferences(
116    int i)
117    {
118  0 return this.identicalCrossReferences[i];
119    }
120   
 
121  0 toggle public void setIdenticalCrossReferences(int i,
122    uk.ac.ebi.picr.model.CrossReference _value)
123    {
124  0 this.identicalCrossReferences[i] = _value;
125    }
126   
127    /**
128    * Gets the logicalCrossReferences value for this UPEntry.
129    *
130    * @return logicalCrossReferences
131    */
 
132  0 toggle public uk.ac.ebi.picr.model.CrossReference[] getLogicalCrossReferences()
133    {
134  0 return logicalCrossReferences;
135    }
136   
137    /**
138    * Sets the logicalCrossReferences value for this UPEntry.
139    *
140    * @param logicalCrossReferences
141    */
 
142  0 toggle public void setLogicalCrossReferences(
143    uk.ac.ebi.picr.model.CrossReference[] logicalCrossReferences)
144    {
145  0 this.logicalCrossReferences = logicalCrossReferences;
146    }
147   
 
148  0 toggle public uk.ac.ebi.picr.model.CrossReference getLogicalCrossReferences(int i)
149    {
150  0 return this.logicalCrossReferences[i];
151    }
152   
 
153  0 toggle public void setLogicalCrossReferences(int i,
154    uk.ac.ebi.picr.model.CrossReference _value)
155    {
156  0 this.logicalCrossReferences[i] = _value;
157    }
158   
159    /**
160    * Gets the sequence value for this UPEntry.
161    *
162    * @return sequence
163    */
 
164  0 toggle public java.lang.String getSequence()
165    {
166  0 return sequence;
167    }
168   
169    /**
170    * Sets the sequence value for this UPEntry.
171    *
172    * @param sequence
173    */
 
174  0 toggle public void setSequence(java.lang.String sequence)
175    {
176  0 this.sequence = sequence;
177    }
178   
179    /**
180    * Gets the timestamp value for this UPEntry.
181    *
182    * @return timestamp
183    */
 
184  0 toggle public java.util.Calendar getTimestamp()
185    {
186  0 return timestamp;
187    }
188   
189    /**
190    * Sets the timestamp value for this UPEntry.
191    *
192    * @param timestamp
193    */
 
194  0 toggle public void setTimestamp(java.util.Calendar timestamp)
195    {
196  0 this.timestamp = timestamp;
197    }
198   
199    private java.lang.Object __equalsCalc = null;
200   
 
201  0 toggle @Override
202    public synchronized boolean equals(java.lang.Object obj)
203    {
204  0 if (obj == null)
205    {
206  0 return false;
207    }
208  0 if (!(obj instanceof UPEntry))
209    {
210  0 return false;
211    }
212  0 UPEntry other = (UPEntry) obj;
213  0 if (this == obj)
214    {
215  0 return true;
216    }
217  0 if (__equalsCalc != null)
218    {
219  0 return (__equalsCalc == obj);
220    }
221  0 __equalsCalc = obj;
222  0 boolean _equals;
223  0 _equals = true
224    && ((this.CRC64 == null && other.getCRC64() == null) || (this.CRC64 != null && this.CRC64
225    .equals(other.getCRC64())))
226    && ((this.UPI == null && other.getUPI() == null) || (this.UPI != null && this.UPI
227    .equals(other.getUPI())))
228    && ((this.identicalCrossReferences == null && other
229    .getIdenticalCrossReferences() == null) || (this.identicalCrossReferences != null && java.util.Arrays
230    .equals(this.identicalCrossReferences,
231    other.getIdenticalCrossReferences())))
232    && ((this.logicalCrossReferences == null && other
233    .getLogicalCrossReferences() == null) || (this.logicalCrossReferences != null && java.util.Arrays
234    .equals(this.logicalCrossReferences,
235    other.getLogicalCrossReferences())))
236    && ((this.sequence == null && other.getSequence() == null) || (this.sequence != null && this.sequence
237    .equals(other.getSequence())))
238    && ((this.timestamp == null && other.getTimestamp() == null) || (this.timestamp != null && this.timestamp
239    .equals(other.getTimestamp())));
240  0 __equalsCalc = null;
241  0 return _equals;
242    }
243   
244    private boolean __hashCodeCalc = false;
245   
 
246  0 toggle @Override
247    public synchronized int hashCode()
248    {
249  0 if (__hashCodeCalc)
250    {
251  0 return 0;
252    }
253  0 __hashCodeCalc = true;
254  0 int _hashCode = 1;
255  0 if (getCRC64() != null)
256    {
257  0 _hashCode += getCRC64().hashCode();
258    }
259  0 if (getUPI() != null)
260    {
261  0 _hashCode += getUPI().hashCode();
262    }
263  0 if (getIdenticalCrossReferences() != null)
264    {
265  0 for (int i = 0; i < java.lang.reflect.Array
266    .getLength(getIdenticalCrossReferences()); i++)
267    {
268  0 java.lang.Object obj = java.lang.reflect.Array.get(
269    getIdenticalCrossReferences(), i);
270  0 if (obj != null && !obj.getClass().isArray())
271    {
272  0 _hashCode += obj.hashCode();
273    }
274    }
275    }
276  0 if (getLogicalCrossReferences() != null)
277    {
278  0 for (int i = 0; i < java.lang.reflect.Array
279    .getLength(getLogicalCrossReferences()); i++)
280    {
281  0 java.lang.Object obj = java.lang.reflect.Array.get(
282    getLogicalCrossReferences(), i);
283  0 if (obj != null && !obj.getClass().isArray())
284    {
285  0 _hashCode += obj.hashCode();
286    }
287    }
288    }
289  0 if (getSequence() != null)
290    {
291  0 _hashCode += getSequence().hashCode();
292    }
293  0 if (getTimestamp() != null)
294    {
295  0 _hashCode += getTimestamp().hashCode();
296    }
297  0 __hashCodeCalc = false;
298  0 return _hashCode;
299    }
300   
301    }
  • Report generated by OpenClover v 4.2.1 on Wed Oct 31 2018 15:15:54 GMT using coverage data from Wed Oct 31 2018 15:15:47 GMT.
  • Clover free edition.