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jalviewX

  1. Project Clover database Wed Oct 31 2018 15:13:58 GMT
  2. Package jalview.schemes

File StrandColourSchemeTest.java

 

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Classes

Class Line # Actions
StrandColourSchemeTest 9 8 1 0
1.0100%
 

Contributing tests

This file is covered by 1 test. .

Source view

1    package jalview.schemes;
2   
3    import static org.testng.Assert.assertEquals;
4   
5    import java.awt.Color;
6   
7    import org.testng.annotations.Test;
8   
 
9    public class StrandColourSchemeTest
10    {
11    /**
12    * Turn colours are based on the scores in ResidueProperties.strand A = 0.83,
13    * R = 0.93, N = 0.89, D = 0.54... min = 0.37 max = 1.7
14    * <p>
15    * scores are scaled to c 0-1 between min and max and colour is (c, c, 1-c)
16    */
 
17  1 toggle @Test(groups = "Functional")
18    public void testFindColour()
19    {
20  1 ScoreColourScheme scheme = new StrandColourScheme();
21   
22  1 float min = 0.37f;
23  1 float max = 1.7f;
24  1 float a = (0.83f - min) / (max - min);
25  1 assertEquals(scheme.findColour('A', 0, null),
26    new Color(a, a, 1 - a));
27   
28  1 float d = (0.54f - min) / (max - min);
29  1 assertEquals(scheme.findColour('D', 0, null),
30    new Color(d, d, 1 - d));
31   
32  1 assertEquals(scheme.findColour('-', 0, null), Color.WHITE);
33    }
34   
35    }