Classes

Class	Line #	Total Statements	Complexity	Uncovered Elements	TOTAL Coverage	Actions
Alcodon	22	25	19	43	0.00%	Show methods

Class Alcodon

Class Alcodon	Line # 22	Total Statements 25	Complexity 19	Uncovered Elements 43	TOTAL Coverage 0.00%
Alcodon()   Alcodon()	6363	1.01	1.01	1.01	0.0 0.00%
deletePos1() : void   deletePos1() : void	7474	1.01	1.01	1.01	0.0 0.00%
deletePos2() : void   deletePos2() : void	8181	1.01	1.01	1.01	0.0 0.00%
deletePos3() : void   deletePos3() : void	8888	1.01	1.01	1.01	0.0 0.00%
getPos1() : long   getPos1() : long	9898	1.01	1.01	1.01	0.0 0.00%
getPos2() : long   getPos2() : long	108108	1.01	1.01	1.01	0.0 0.00%
getPos3() : long   getPos3() : long	118118	1.01	1.01	1.01	0.0 0.00%
hasPos1() : boolean   hasPos1() : boolean	128128	1.01	1.01	1.01	0.0 0.00%
hasPos2() : boolean   hasPos2() : boolean	138138	1.01	1.01	1.01	0.0 0.00%
hasPos3() : boolean   hasPos3() : boolean	148148	1.01	1.01	1.01	0.0 0.00%
isValid() : boolean   isValid() : boolean	158158	4.04	2.02	4.04	0.0 0.00%
marshal(java.io.Writer) : void   marshal(java.io.Writer) : void	180180	1.01	1.01	1.01	0.0 0.00%
marshal(org.xml.sax.ContentHandler) : void   marshal(org.xml.sax.ContentHandler) : void	199199	1.01	1.01	1.01	0.0 0.00%
setPos1(long) : void   setPos1(long) : void	213213	2.02	1.01	2.02	0.0 0.00%
setPos2(long) : void   setPos2(long) : void	225225	2.02	1.01	2.02	0.0 0.00%
setPos3(long) : void   setPos3(long) : void	237237	2.02	1.01	2.02	0.0 0.00%
unmarshal(java.io.Reader) : jalview.schemabinding.version2.Alcodon   unmarshal(java.io.Reader) : jalview.schemabinding.version2.Alcodon	254254	1.01	1.01	1.01	0.0 0.00%
validate() : void   validate() : void	269269	2.02	1.01	2.02	0.0 0.00%

 

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1		/*
2		* This class was automatically generated with
3		* <a href="http://www.castor.org">Castor 1.1</a>, using an XML
4		* Schema.
5		* $Id$
6		*/
7
8		package jalview.schemabinding.version2;
9
10		//---------------------------------/
11		//- Imported classes and packages -/
12		//---------------------------------/
13
14		import org.exolab.castor.xml.Marshaller;
15		import org.exolab.castor.xml.Unmarshaller;
16
17		/**
18		* Class Alcodon.
19		*
20		* @version $Revision$ $Date$
21		*/
		0% Uncovered Elements: 43 (43) Complexity: 19 Complexity Density: 0.76
22		public class Alcodon implements java.io.Serializable
23		{
24
25		// --------------------------/
26		// - Class/Member Variables -/
27		// --------------------------/
28
29		/**
30		* Field _pos1.
31		*/
32		private long _pos1;
33
34		/**
35		* keeps track of state for field: _pos1
36		*/
37		private boolean _has_pos1;
38
39		/**
40		* Field _pos2.
41		*/
42		private long _pos2;
43
44		/**
45		* keeps track of state for field: _pos2
46		*/
47		private boolean _has_pos2;
48
49		/**
50		* Field _pos3.
51		*/
52		private long _pos3;
53
54		/**
55		* keeps track of state for field: _pos3
56		*/
57		private boolean _has_pos3;
58
59		// ----------------/
60		// - Constructors -/
61		// ----------------/
62
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
63	0	public Alcodon()...
64		{
65	0	super();
66		}
67
68		// -----------/
69		// - Methods -/
70		// -----------/
71
72		/**
73		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
74	0	public void deletePos1()...
75		{
76	0	this._has_pos1 = false;
77		}
78
79		/**
80		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
81	0	public void deletePos2()...
82		{
83	0	this._has_pos2 = false;
84		}
85
86		/**
87		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
88	0	public void deletePos3()...
89		{
90	0	this._has_pos3 = false;
91		}
92
93		/**
94		* Returns the value of field 'pos1'.
95		*
96		* @return the value of field 'Pos1'.
97		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
98	0	public long getPos1()...
99		{
100	0	return this._pos1;
101		}
102
103		/**
104		* Returns the value of field 'pos2'.
105		*
106		* @return the value of field 'Pos2'.
107		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
108	0	public long getPos2()...
109		{
110	0	return this._pos2;
111		}
112
113		/**
114		* Returns the value of field 'pos3'.
115		*
116		* @return the value of field 'Pos3'.
117		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
118	0	public long getPos3()...
119		{
120	0	return this._pos3;
121		}
122
123		/**
124		* Method hasPos1.
125		*
126		* @return true if at least one Pos1 has been added
127		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
128	0	public boolean hasPos1()...
129		{
130	0	return this._has_pos1;
131		}
132
133		/**
134		* Method hasPos2.
135		*
136		* @return true if at least one Pos2 has been added
137		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
138	0	public boolean hasPos2()...
139		{
140	0	return this._has_pos2;
141		}
142
143		/**
144		* Method hasPos3.
145		*
146		* @return true if at least one Pos3 has been added
147		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
148	0	public boolean hasPos3()...
149		{
150	0	return this._has_pos3;
151		}
152
153		/**
154		* Method isValid.
155		*
156		* @return true if this object is valid according to the schema
157		*/
		0% Uncovered Elements: 4 (4) Complexity: 2 Complexity Density: 0.5
158	0	public boolean isValid()...
159		{
160	0	try
161		{
162	0	validate();
163		} catch (org.exolab.castor.xml.ValidationException vex)
164		{
165	0	return false;
166		}
167	0	return true;
168		}
169
170		/**
171		*
172		*
173		* @param out
174		* @throws org.exolab.castor.xml.MarshalException
175		* if object is null or if any SAXException is thrown during
176		* marshaling
177		* @throws org.exolab.castor.xml.ValidationException
178		* if this object is an invalid instance according to the schema
179		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
180	0	public void marshal(final java.io.Writer out)...
181		throws org.exolab.castor.xml.MarshalException,
182		org.exolab.castor.xml.ValidationException
183		{
184	0	Marshaller.marshal(this, out);
185		}
186
187		/**
188		*
189		*
190		* @param handler
191		* @throws java.io.IOException
192		* if an IOException occurs during marshaling
193		* @throws org.exolab.castor.xml.ValidationException
194		* if this object is an invalid instance according to the schema
195		* @throws org.exolab.castor.xml.MarshalException
196		* if object is null or if any SAXException is thrown during
197		* marshaling
198		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
199	0	public void marshal(final org.xml.sax.ContentHandler handler)...
200		throws java.io.IOException,
201		org.exolab.castor.xml.MarshalException,
202		org.exolab.castor.xml.ValidationException
203		{
204	0	Marshaller.marshal(this, handler);
205		}
206
207		/**
208		* Sets the value of field 'pos1'.
209		*
210		* @param pos1
211		* the value of field 'pos1'.
212		*/
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
213	0	public void setPos1(final long pos1)...
214		{
215	0	this._pos1 = pos1;
216	0	this._has_pos1 = true;
217		}
218
219		/**
220		* Sets the value of field 'pos2'.
221		*
222		* @param pos2
223		* the value of field 'pos2'.
224		*/
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
225	0	public void setPos2(final long pos2)...
226		{
227	0	this._pos2 = pos2;
228	0	this._has_pos2 = true;
229		}
230
231		/**
232		* Sets the value of field 'pos3'.
233		*
234		* @param pos3
235		* the value of field 'pos3'.
236		*/
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
237	0	public void setPos3(final long pos3)...
238		{
239	0	this._pos3 = pos3;
240	0	this._has_pos3 = true;
241		}
242
243		/**
244		* Method unmarshal.
245		*
246		* @param reader
247		* @throws org.exolab.castor.xml.MarshalException
248		* if object is null or if any SAXException is thrown during
249		* marshaling
250		* @throws org.exolab.castor.xml.ValidationException
251		* if this object is an invalid instance according to the schema
252		* @return the unmarshaled jalview.schemabinding.version2.Alcodo
253		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
254	0	public static jalview.schemabinding.version2.Alcodon unmarshal(...
255		final java.io.Reader reader)
256		throws org.exolab.castor.xml.MarshalException,
257		org.exolab.castor.xml.ValidationException
258		{
259	0	return (jalview.schemabinding.version2.Alcodon) Unmarshaller.unmarshal(
260		jalview.schemabinding.version2.Alcodon.class, reader);
261		}
262
263		/**
264		*
265		*
266		* @throws org.exolab.castor.xml.ValidationException
267		* if this object is an invalid instance according to the schema
268		*/
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
269	0	public void validate() throws org.exolab.castor.xml.ValidationException...
270		{
271	0	org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
272	0	validator.validate(this);
273		}
274
275		}