Package	Files	Average Method Complexity	Uncovered Elements	TOTAL Coverage
jalview.analysis jalview.analysis	17.0 17	1.5087719 1.51	243.0 243	0.92757076 0.9275707692.8%

Class	Methods	Average Method Complexity	Uncovered Elements	TOTAL Coverage
CrossRefTest CrossRefTest	20.0 20	1.05 1.05	129.0 129	0.5641892 0.564189256.4%
AAFrequencyTest AAFrequencyTest	6.0 6	1.1666666 1.17	15.0 15	0.8828125 0.882812588.3%
AlignmentUtilsTests AlignmentUtilsTests	46.0 46	1.0869565 1.09	92.0 92	0.935799 0.93579993.6%
TestAlignSeq TestAlignSeq	7.0 7	1.1428572 1.14	2.0 2	0.94871795 0.9487179594.9%
RnaTest RnaTest	13.0 13	6.230769 6.23	5.0 5	0.9705882 0.970588297.1%
AlignSeqTest AlignSeqTest	4.0 4	1.0 1	0.0 0	1.0 1.0100%
AlignmentAnnotationUtilsTest AlignmentAnnotationUtilsTest	9.0 9	1.1111112 1.11	0.0 0	1.0 1.0100%
AlignmentSorterTest AlignmentSorterTest	2.0 2	1.0 1	0.0 0	1.0 1.0100%
AnnotationSorterTest AnnotationSorterTest	15.0 15	1.3333334 1.33	0.0 0	1.0 1.0100%
CodingUtilsTest CodingUtilsTest	4.0 4	1.0 1	0.0 0	1.0 1.0100%
ConservationTest ConservationTest	6.0 6	1.0 1	0.0 0	1.0 1.0100%
DnaTest DnaTest	19.0 19	1.2105263 1.21	0.0 0	1.0 1.0100%
FinderTest FinderTest	9.0 9	1.0 1	0.0 0	1.0 1.0100%
GroupingTest GroupingTest	2.0 2	2.0 2	0.0 0	1.0 1.0100%
ParsePropertiesTest ParsePropertiesTest	5.0 5	1.0 1	0.0 0	1.0 1.0100%
SeqsetUtilsTest SeqsetUtilsTest	2.0 2	1.0 1	0.0 0	1.0 1.0100%
SequenceIdMatcherTest SequenceIdMatcherTest	2.0 2	1.0 1	0.0 0	1.0 1.0100%