Classes

Class	Line #	Total Statements	Complexity	Uncovered Elements	TOTAL Coverage	Actions
MuscleWSServiceLocator	25	39	23	65	0.00%	Show methods

Class MuscleWSServiceLocator

Class MuscleWSServiceLocator	Line # 25	Total Statements 39	Complexity 23	Uncovered Elements 65	TOTAL Coverage 0.00%
MuscleWSServiceLocator()   MuscleWSServiceLocator()	3636	0.00	1.01	0.00	-1.0 -1.0 -
MuscleWSServiceLocator(org.apache.axis.EngineConfiguration)   MuscleWSServiceLocator(org.apache.axis.EngineConfiguration)	4040	1.01	1.01	1.01	0.0 0.00%
getMuscleWSAddress() : java.lang.String   getMuscleWSAddress() : java.lang.String	4545	1.01	1.01	1.01	0.0 0.00%
getMuscleWSWSDDServiceName() : java.lang.String   getMuscleWSWSDDServiceName() : java.lang.String	5050	1.01	1.01	1.01	0.0 0.00%
setMuscleWSWSDDServiceName(java.lang.String) : void   setMuscleWSWSDDServiceName(java.lang.String) : void	5555	1.01	1.01	1.01	0.0 0.00%
getMuscleWS() : ext.vamsas.MuscleWS   getMuscleWS() : ext.vamsas.MuscleWS	6060	5.05	2.02	5.05	0.0 0.00%
getMuscleWS(java.net.URL) : ext.vamsas.MuscleWS   getMuscleWS(java.net.URL) : ext.vamsas.MuscleWS	7676	5.05	2.02	5.05	0.0 0.00%
setMuscleWSEndpointAddress(java.lang.String) : void   setMuscleWSEndpointAddress(java.lang.String) : void	9292	1.01	1.01	1.01	0.0 0.00%
getPort(Class) : java.rmi.Remote   getPort(Class) : java.rmi.Remote	101101	7.07	4.04	11.011	0.0 0.00%
getPort(javax.xml.namespace.QName,Class) : java.rmi.Remote   getPort(javax.xml.namespace.QName,Class) : java.rmi.Remote	130130	8.08	3.03	12.012	0.0 0.00%
getServiceName() : javax.xml.namespace.QName   getServiceName() : javax.xml.namespace.QName	154154	1.01	1.01	1.01	0.0 0.00%
getPorts() : java.util.Iterator   getPorts() : java.util.Iterator	159159	4.04	2.02	6.06	0.0 0.00%
setEndpointAddress(java.lang.String,java.lang.String) : void   setEndpointAddress(java.lang.String,java.lang.String) : void	173173	3.03	2.02	5.05	0.0 0.00%
setEndpointAddress(javax.xml.namespace.QName,java.lang.String) : void   setEndpointAddress(javax.xml.namespace.QName,java.lang.String) : void	192192	1.01	1.01	1.01	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package ext.vamsas;
22
23		import jalview.util.MessageManager;
24
		0% Uncovered Elements: 65 (65) Complexity: 23 Complexity Density: 0.59
25		public class MuscleWSServiceLocator extends org.apache.axis.client.Service
26		implements ext.vamsas.MuscleWSService
27		{
28		// Use to get a proxy class for MuscleWS
29		private java.lang.String MuscleWS_address = "http://anaplog.compbio.dundee.ac.uk:8080/axis/services/MuscleWS";
30
31		// The WSDD service name defaults to the port name.
32		private java.lang.String MuscleWSWSDDServiceName = "MuscleWS";
33
34		private java.util.HashSet ports = null;
35
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
36	0	public MuscleWSServiceLocator()...
37		{
38		}
39
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
40	0	public MuscleWSServiceLocator(org.apache.axis.EngineConfiguration config)...
41		{
42	0	super(config);
43		}
44
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
45	0	public java.lang.String getMuscleWSAddress()...
46		{
47	0	return MuscleWS_address;
48		}
49
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
50	0	public java.lang.String getMuscleWSWSDDServiceName()...
51		{
52	0	return MuscleWSWSDDServiceName;
53		}
54
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
55	0	public void setMuscleWSWSDDServiceName(java.lang.String name)...
56		{
57	0	MuscleWSWSDDServiceName = name;
58		}
59
		0% Uncovered Elements: 5 (5) Complexity: 2 Complexity Density: 0.4
60	0	public ext.vamsas.MuscleWS getMuscleWS()...
61		throws javax.xml.rpc.ServiceException
62		{
63	0	java.net.URL endpoint;
64
65	0	try
66		{
67	0	endpoint = new java.net.URL(MuscleWS_address);
68		} catch (java.net.MalformedURLException e)
69		{
70	0	throw new javax.xml.rpc.ServiceException(e);
71		}
72
73	0	return getMuscleWS(endpoint);
74		}
75
		0% Uncovered Elements: 5 (5) Complexity: 2 Complexity Density: 0.4
76	0	public ext.vamsas.MuscleWS getMuscleWS(java.net.URL portAddress)...
77		throws javax.xml.rpc.ServiceException
78		{
79	0	try
80		{
81	0	ext.vamsas.MuscleWSSoapBindingStub _stub = new ext.vamsas.MuscleWSSoapBindingStub(
82		portAddress, this);
83	0	_stub.setPortName(getMuscleWSWSDDServiceName());
84
85	0	return _stub;
86		} catch (org.apache.axis.AxisFault e)
87		{
88	0	return null;
89		}
90		}
91
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
92	0	public void setMuscleWSEndpointAddress(java.lang.String address)...
93		{
94	0	MuscleWS_address = address;
95		}
96
97		/**
98		* For the given interface, get the stub implementation. If this service has
99		* no port for the given interface, then ServiceException is thrown.
100		*/
		0% Uncovered Elements: 11 (11) Complexity: 4 Complexity Density: 0.57
101	0	public java.rmi.Remote getPort(Class serviceEndpointInterface)...
102		throws javax.xml.rpc.ServiceException
103		{
104	0	try
105		{
106	0	if (ext.vamsas.MuscleWS.class
107		.isAssignableFrom(serviceEndpointInterface))
108		{
109	0	ext.vamsas.MuscleWSSoapBindingStub _stub = new ext.vamsas.MuscleWSSoapBindingStub(
110		new java.net.URL(MuscleWS_address), this);
111	0	_stub.setPortName(getMuscleWSWSDDServiceName());
112
113	0	return _stub;
114		}
115		} catch (java.lang.Throwable t)
116		{
117	0	throw new javax.xml.rpc.ServiceException(t);
118		}
119
120	0	throw new javax.xml.rpc.ServiceException(MessageManager.formatMessage(
121		"exception.no_stub_implementation_for_interface",
122	0	new String[] { (serviceEndpointInterface == null ? "null"
123		: serviceEndpointInterface.getName()) }));
124		}
125
126		/**
127		* For the given interface, get the stub implementation. If this service has
128		* no port for the given interface, then ServiceException is thrown.
129		*/
		0% Uncovered Elements: 12 (12) Complexity: 3 Complexity Density: 0.38
130	0	public java.rmi.Remote getPort(javax.xml.namespace.QName portName,...
131		Class serviceEndpointInterface)
132		throws javax.xml.rpc.ServiceException
133		{
134	0	if (portName == null)
135		{
136	0	return getPort(serviceEndpointInterface);
137		}
138
139	0	java.lang.String inputPortName = portName.getLocalPart();
140
141	0	if ("MuscleWS".equals(inputPortName))
142		{
143	0	return getMuscleWS();
144		}
145		else
146		{
147	0	java.rmi.Remote _stub = getPort(serviceEndpointInterface);
148	0	((org.apache.axis.client.Stub) _stub).setPortName(portName);
149
150	0	return _stub;
151		}
152		}
153
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
154	0	public javax.xml.namespace.QName getServiceName()...
155		{
156	0	return new javax.xml.namespace.QName("vamsas", "MuscleWSService");
157		}
158
		0% Uncovered Elements: 6 (6) Complexity: 2 Complexity Density: 0.5
159	0	public java.util.Iterator getPorts()...
160		{
161	0	if (ports == null)
162		{
163	0	ports = new java.util.HashSet();
164	0	ports.add(new javax.xml.namespace.QName("vamsas", "MuscleWS"));
165		}
166
167	0	return ports.iterator();
168		}
169
170		/**
171		* Set the endpoint address for the specified port name.
172		*/
		0% Uncovered Elements: 5 (5) Complexity: 2 Complexity Density: 0.67
173	0	public void setEndpointAddress(java.lang.String portName,...
174		java.lang.String address) throws javax.xml.rpc.ServiceException
175		{
176	0	if ("MuscleWS".equals(portName))
177		{
178	0	setMuscleWSEndpointAddress(address);
179		}
180		else
181		{ // Unknown Port Name
182	0	throw new javax.xml.rpc.ServiceException(
183		MessageManager.formatMessage(
184		"exception.cannot_set_endpoint_address_unknown_port",
185		new String[] { portName }));
186		}
187		}
188
189		/**
190		* Set the endpoint address for the specified port name.
191		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
192	0	public void setEndpointAddress(javax.xml.namespace.QName portName,...
193		java.lang.String address) throws javax.xml.rpc.ServiceException
194		{
195	0	setEndpointAddress(portName.getLocalPart(), address);
196		}
197		}