Gradle Develop Build
Jalview Builds
Tests: 1796 passed
Duration: 14 minutes
Changes: No changes
Code changes detected
bug-JAL-4562_CLI_ignores_second_and_subsequent_annotation_files
Jalview Builds - Gradle Develop Build
Tests: 1822 passed
Duration: 8 minutes
Changes: No changes
First build for this plan
bug-JAL-4568_r2_11_4_2_jmol_image_deadlock
Jalview Builds - Gradle Develop Build
Tests: 1822 passed
Duration: 13 minutes
Changes: No changes
First build for this plan
development-Release_2_11_4_Branch
Jalview Builds - Gradle Develop Build
Tests: 1822 passed
Duration: 12 minutes
Changes: Who: Ben Soares <b.soares@dundee.ac.uk>
Why: JAL-4562 Allow fetching multiple arg values from both subval and arguments within an ArgValuesMap.  Do this for annotations and features files.  Added a test to check multiple annotations files are being opened.

Who: Gitlab User
Why: Merge branch "bug/JAL-4562_CLI_ignores_second_and_subsequent_annotation_files" into develop

Who: Gitlab User
Why: JAL-4490 release notes for JAL-4562
development-Release_2_11_5_Branch
Jalview Builds - Gradle Develop Build
Tests: 1869 passed
Duration: 9 minutes
Changes: Who: Renia Correya
Why: Merge branch "feature/JAL-4542_highlight_selected_annot_labels_tree_nodes" into "development/Release_2_11_5_Branch"
JAL-4542 Highlight selected annotation labels

See merge request jalview/jalview!16
Changes by Renia Correya
feature-JAL-4515_Group_colouring_as_background
Jalview Builds - Gradle Develop Build
Tests: 1862 passed
Duration: 9 minutes
Changes: No changes
First build for this plan
feature-JAL-4542_highlight_selected_annot_labels_tree_nodes
Jalview Builds - Gradle Develop Build
Tests: 1816 passed
Duration: 8 minutes
Changes: Who: Gitlab User
Why: JAL-4542 optimised conditionals for showing annotation as selected or coloured
Changes by Gitlab User
feature-JAL-4548_show_PDBID_metadata_for_annot_tree
Jalview Builds - Gradle Develop Build
Tests: 1862 passed
Duration: 8 minutes
Changes: Who: Renia Correya
Why: JAL-4548 JAL-3880 JAL-4411 Code refactoring
Moved ANNOTATION_DETAILS and extractSSSourceFromAnnotationDescription()
in to AlignmentAnnotationUtils Class and updated tests.
Changes by Renia Correya
improvement-JAL-4560_handle_relative_paths_in_jvl_files
Jalview Builds - Gradle Develop Build
Tests: 1819 passed
Duration: 8 minutes
Changes: Who: Ben Soares <b.soares@dundee.ac.uk>
Why: JAL-4560 Remove code in jalview.bin.Jalview to make best effort cwd change.  This is being handled more effectively by getdown and Launcher.
improvement-JAL-4570_show_tree_above_alignmentview
Jalview Builds - Gradle Develop Build
Tests: 1822 passed
Duration: 8 minutes
Changes: No changes
First build for this plan
patch-JAL-3987_pergroup_annotation_consensus
Jalview Builds - Gradle Develop Build
Tests: 1863 passed
Duration: 8 minutes
Changes: Who: Gitlab User
Why: JAL-3987 FIXMEs and TODOs - test now passes but not sure about when sources == NULL condition for SS consensus...
Changes by Gitlab User
patch-JAL-4564_JAL-4563_urls_and_structure_args
Jalview Builds - Gradle Develop Build
Tests: 1819 passed
Duration: 9 minutes
Changes: No changes
Code changes detected
spike-JAL-4576_ligysis_exploration
Jalview Builds - Gradle Develop Build
Tests: 2 of 1863 failed
Duration: 8 minutes
Changes: Who: Gitlab User
Why: JAL-4576 allow import of column trees with multiple columns per node like "c1c2c3" for columns 1,2,3 linked to a simple annotation row

Who: Gitlab User
Why: JAL-4576 import sites as a column tree linked to "fingerprint" contact count that can be used to colour the sequence by column tree clusters
Changes by Gitlab User