Ben Soares <b.soares@dundee.ac.uk>: Author Summary
| Build | Completed | Code commits | Tests |
|---|---|---|---|
| JB › GDBI › #21 | 1 year ago |
JAL-4186 fixed a test
JAL-4186 fix dialog. broken in JalviewJS
JAL-4186 attempts to work in jalviewjs, still not working
JAL-4186 Turn JvOptionPane Callable<Void> handlers back into Runnable for jalviewjs (now working)
|
Testless build |
| JB › GPC › #302 | 12 hours ago |
JAL-3631 Added verbose and quiet options, and matched vmoptions with installer. Provenance of options added.
JAL-3631 Tweaks to getdown for updating and user appdir properties
JAL-3631 Group/box and simplify visibility of advanced options on additional tasks screen in the install4j installation wizard.
JAL-3631 Comprehensive install shell script for macos
JAL-3631 Customise the user-space path in the install4j installation wizard. Not ready yet.
JAL-3631 Correct some text to add the file separator which is being looked for too in substitutions
JAL-3631 Extensive working of options in install4j for allowing/disabling user default appdir updates, and also allowing/disabling installation appdir updates. Appropriate guidance in tooltips and warnings when no updates will occur are given. A user-space install only allows disabling updates.
JAL-3631 Consolidated repeated code (mainly form verification). Added appdir hash routine. Wizard installer of .app bundle now deprecated, can't be used :(
JAL-3631 Minor fixes to the advanced options scripts
JAL-3631 Consistently and correctly enable/diable/hide elements on the additional tasks screen in the install4j installation wizard.
JAL-3631 Made both Advanced options into a group. Changed visibility scripts to minimum required. Added a Don't setUserAppdirPath comment.
JAL-3631 Improved tooltip on advanced options. Ensure empty box/border isn't displayed when no advanced options. Add message to clarify no Advanced options will be applied when checkbox not ticked.
JAL-3631 minor changes - spelling and comment spacing in install4j template
JAL-3631 Some minor bugfixes to the install4j installer and word changes to match macos-install-jalview.sh
JAL-3631 Allow override of appDataPath with property 'setuserappdirpath' substituting %h, %u and a leading ~/
|
Testless build |
| JB › GDL › #20 | 12 hours ago |
JAL-3631 Comprehensive install shell script for macos
JAL-3631 Correct some text to add the file separator which is being looked for too in substitutions
JAL-3631 minor changes - spelling and comment spacing in install4j template
JAL-3631 Consolidated repeated code (mainly form verification). Added appdir hash routine. Wizard installer of .app bundle now deprecated, can't be used :(
JAL-3631 Customise the user-space path in the install4j installation wizard. Not ready yet.
JAL-3631 Added verbose and quiet options, and matched vmoptions with installer. Provenance of options added.
JAL-3631 Tweaks to getdown for updating and user appdir properties
JAL-3631 Group/box and simplify visibility of advanced options on additional tasks screen in the install4j installation wizard.
JAL-3631 Extensive working of options in install4j for allowing/disabling user default appdir updates, and also allowing/disabling installation appdir updates. Appropriate guidance in tooltips and warnings when no updates will occur are given. A user-space install only allows disabling updates.
JAL-3631 Improved tooltip on advanced options. Ensure empty box/border isn't displayed when no advanced options. Add message to clarify no Advanced options will be applied when checkbox not ticked.
JAL-3631 Allow override of appDataPath with property 'setuserappdirpath' substituting %h, %u and a leading ~/
JAL-3631 Minor fixes to the advanced options scripts
JAL-3631 Made both Advanced options into a group. Changed visibility scripts to minimum required. Added a Don't setUserAppdirPath comment.
JAL-3631 Some minor bugfixes to the install4j installer and word changes to match macos-install-jalview.sh
JAL-3631 Consistently and correctly enable/diable/hide elements on the additional tasks screen in the install4j installation wizard.
|
Testless build |
| JB › GJB › #418 | 12 hours ago |
JAL-3631 Extensive working of options in install4j for allowing/disabling user default appdir updates, and also allowing/disabling installation appdir updates. Appropriate guidance in tooltips and warnings when no updates will occur are given. A user-space install only allows disabling updates.
JAL-3631 Consolidated repeated code (mainly form verification). Added appdir hash routine. Wizard installer of .app bundle now deprecated, can't be used :(
JAL-3631 minor changes - spelling and comment spacing in install4j template
JAL-3631 Added verbose and quiet options, and matched vmoptions with installer. Provenance of options added.
JAL-3631 Minor fixes to the advanced options scripts
JAL-3631 Tweaks to getdown for updating and user appdir properties
JAL-3631 Group/box and simplify visibility of advanced options on additional tasks screen in the install4j installation wizard.
JAL-3631 Correct some text to add the file separator which is being looked for too in substitutions
JAL-3631 Customise the user-space path in the install4j installation wizard. Not ready yet.
JAL-3631 Made both Advanced options into a group. Changed visibility scripts to minimum required. Added a Don't setUserAppdirPath comment.
JAL-3631 Improved tooltip on advanced options. Ensure empty box/border isn't displayed when no advanced options. Add message to clarify no Advanced options will be applied when checkbox not ticked.
JAL-3631 Allow override of appDataPath with property 'setuserappdirpath' substituting %h, %u and a leading ~/
JAL-3631 Some minor bugfixes to the install4j installer and word changes to match macos-install-jalview.sh
JAL-3631 Consistently and correctly enable/diable/hide elements on the additional tasks screen in the install4j installation wizard.
JAL-3631 Comprehensive install shell script for macos
|
Testless build |
| JB › GDB › #644 | 12 hours ago |
JAL-3631 Some minor bugfixes to the install4j installer and word changes to match macos-install-jalview.sh
JAL-3631 Consolidated repeated code (mainly form verification). Added appdir hash routine. Wizard installer of .app bundle now deprecated, can't be used :(
JAL-3631 Extensive working of options in install4j for allowing/disabling user default appdir updates, and also allowing/disabling installation appdir updates. Appropriate guidance in tooltips and warnings when no updates will occur are given. A user-space install only allows disabling updates.
JAL-3631 Consistently and correctly enable/diable/hide elements on the additional tasks screen in the install4j installation wizard.
JAL-3631 minor changes - spelling and comment spacing in install4j template
JAL-3631 Improved tooltip on advanced options. Ensure empty box/border isn't displayed when no advanced options. Add message to clarify no Advanced options will be applied when checkbox not ticked.
JAL-3631 Correct some text to add the file separator which is being looked for too in substitutions
JAL-3631 Allow override of appDataPath with property 'setuserappdirpath' substituting %h, %u and a leading ~/
JAL-3631 Minor fixes to the advanced options scripts
JAL-3631 Made both Advanced options into a group. Changed visibility scripts to minimum required. Added a Don't setUserAppdirPath comment.
JAL-3631 Customise the user-space path in the install4j installation wizard. Not ready yet.
JAL-3631 Tweaks to getdown for updating and user appdir properties
JAL-3631 Added verbose and quiet options, and matched vmoptions with installer. Provenance of options added.
JAL-3631 Group/box and simplify visibility of advanced options on additional tasks screen in the install4j installation wizard.
JAL-3631 Comprehensive install shell script for macos
|
1761 passed |
| JB › GDC › #199 | 3 weeks ago |
JAL-3631 Adjustments to the Windows installer
JAL-3631 Change in user path for locally installed Jalview to avoid collision with old installation. Tidy a null check for Java Console output
JAL-4409 Add two empty args to getdown call from install4j for backward compatibility, and further arguments such as JVL file. Improve handling of a JVL file with an appbase in it.
JAL-3631 JAL-4104 More consistent system property names passing through getdown. Add nousedefaultappdir property to allow non-updating system installation of Jalview.
JAL-3631 Removed old non-user launcher. Labelled USERSPACE actions.
JAL-3631 Got rid of the USER_EXECUTABLE_NAME as it's no longer needed since getting rid of the old Launcher in install4j
JAL-3631 spelling correction
JAL-3631 Report getCanonicalPath for installer appdir
JAL-3631 macos dev install script incorporated into dev_install.sh
JAL-3631 Slightly larger wizard
JAL-3631 Harden defence against looping getdown relaunches. Null checked in HttpUtils. Remove unnecessary code in getdown
JAL-3631 Use the icon file passed by install4j if a newer getdown-launcher is relaunched
JAL-3631 gradle-build-and-re-install script, works with macOS or Linux
JAL-3631 Change parity of comparison for convention
JAL-3631 JVL file with appbase now relaunches getdown
JAL-3631 Forgot to add this file for 'Change parity of comparison for convention' commit
Merge branch 'develop' into feature/JAL-3631_allow_jalview_to_work_from_user-space_directory
JAL-3631 Made an isAdmin flag to work in Windows Admin mode installation
JAL-4358 slight improvement to detecting desktop creation to close getdown splash screen
JAL-3631 Allow -Pinstall4j_build_ids=MACOS-AARCH64-DMG for specific installer build. Fix installer icons (PNGs and paths).
JAL-3631 Spot system property triggers in getdown to create/activate using a user-space location (dependent on OS), and copy digest-tested files from the Application's app dir to the user's new app dir. Debugging statements left in for testing on other OSes.
JAL-3631 Installers with separate actions for user/administrator installation
JAL-3631 Change to Windows user-space default location, now same as default installation location
JAL-3631 Substantial additions to Getdown (through jalview.util.LaunchUtils) to re-launch getdown-launcher.jar when the user's version differs from the installed version. install4j vmoptions file allows administrator to prevent any automatic updates.
JAL-3631 Group USERSPACE and SYSTEMSPACE tasks (and other groups of tasks) together for neatness
JAL-3631 Changed label for consistency
JAL-3631 New Installer icons. Getdown check that the application appdir is different from the user default appdir before copying files. Also copy gedown-launcher.jar.
JAL-3845 Add a popup error message, with instructions, when Jalview launched from the Installer Volume
JAL-3631 Fixed a getdown Exception when launching Jalview in windows
JAL-3631 JAL-3384 Install4j launch now redirects STDOUT/STDERR to ~/.jalview_develop.log and passes the file on to getdown and Jalview which will also now log to this file. Single log file.
JAL-3631 Tests for version comparisons and Jar version comparisons and Jar version checking
JAL-3631 Allow icon file name to be passed to launcher by install4j
JAL-3631 Allow quick deployment of gradle build on linux and macos
Merge branch 'improvement/JAL-4409_implement_extra_schemes_in_getdown' into feature/JAL-3631_allow_jalview_to_work_from_user-space_directory
JAL-3631 updated getdown jars
Merge branch 'develop' into feature/JAL-3631_allow_jalview_to_work_from_user-space_directory
JAL-3631 Log4j logging to .jalview.log file when requested. Clean(ish) handover of log file from getdown to jalview.
JAL-3830 Added some quotation marks to jalview.bat for folders with spaces
JAL-3631 Now sending launcher.appdir from within getdown
JAL-3631 Name changes to system properties and a fallback App name to avoid hard-coded name in getdown
Merge branch 'bug/JAL-4421_customise_volume_name_of_DMG_installers' into feature/JAL-3631_allow_jalview_to_work_from_user-space_directory
JAL-3631 Remove the checkboxes from the Finish screen. Now moved to pre-install screen.
JAL-4421 Update the dev_masos_installer.sh to use new Volume name
JAL-3631 Add property to let log4j know we're not running in a servlet (or it issues a warning which breaks cli headless output)
JAL-3631 Rename/rationalise informational system property names. Re-order display of information on Java Console. Supply info from authoratitive sources (getdown-launcher.jar rather than gradle.properties).
JAL-3631 Check Implementation-Version of getdown-launcher.jar in installation appdir and user's appdir, and only use the user one if it's newer. Remove content digest check for getdown-launcher.jar comparison since version now being checked.
JAL-3631 Add a new launcher in install4j to pass new system properties to getdown, triggering the user-space appdir creation
|
Testless build |
| JB › GDC › #198 | 1 month ago |
JAL-4420 Allow associated files to be dragged on separately from the alignment (but afterwards).
Merge branch 'develop' into improvement/JAL-4409_implement_extra_schemes_in_getdown
JAL-4409 Don't merge JVL configs when changing appbase
JAL-4358 Add the JALVIEW: CREATED DESKTOP line to java app and look out for it in Getdown to close the splash screen
JAL-4072 Add zip-slip check in getdown
JAL-4409 Small refactoring of ArgParserUtils to allow processFiles to work on drag-and-dropped files list.
JAL-4420 Added some more filename extensions
JAL-4409 Changes in BUILD channel appbase to tie in with Getdown DEVELOP Launcher build plan
JAL-4409 Use fixed 'latest' artifact URL
|
Testless build |
| JB › GGR › #7 | 1 year ago |
JAL-629 Made ArgValuesMap helper class, simplifies readability/writing of the code and will allow arg position lookups
JAL-629 Add debug messages for more failing tests
JAL-4125 Additions to JvOptionPane and QuitHandler with StructureViewerBase handling closed frame during quit differently. Still not working as dialog content does not appear until after quithandling thread has finished (it's blocking EDT). Need to break the doDesktopQuit Callable up into sections, that add another bit to the end when necessary.
JAL-4088 Updated j8libs/*.jar in THIRDPARTYLIBS
JAL-629 bootstrap args and properties. Remember index of args for 'previous structure' defaulting of other args
JAL-629 test fixing
JAL-629 refactoring TFType. Remove i18n identification of annotation.
Merge branch 'develop' into features/r2_11_2_alphafold/JAL-629
JAL-4128 Catch RasterFormatException caused whilst resizing Overview window, recalculate OverviewDimensions od instead. Prevent negative OverviewDimensions being set to avoid problem with vertically fully shrunk overview window 'losing' the alignement canvas.
JAL-1988 Add a sleep to file save test to give time for file to save
JAL-629 nf-core sample alignment files and a2m versions
JAL-629 Fasta sequence id reading whitespace fix. Flexioble pae json keys and structure. Headless fixes. Logging fixes (MessageManager -- test broken). ArgParser and Console helper methods. Commands added e.g. --colour=gecos:flower.
JAL-3416 Fix file permissions on bundled macOS JREs
JAL-629 "updated" json-simple
Merge branch 'merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064' into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
Merge branch 'develop' into features/r2_11_2_alphafold/JAL-629
JAL-3416 No longer needed
JAL-4064 JAL-4054 Corrected the tgz top-level dir from './Contents' to 'Contents' for mac JRE bundles for install4j (not strictly used, but might be in the future).
JAL-629 Attempts to add PAE to structure. --headless working. Make HTML output single threaded in headless mode. Delete an editor temp file.
JAL-4118 fix a small buglet in BackupFiles exhibited in tests on build server. Possible problem with filename with dirs in passed to BackupFiles.
JAL-629 added Alphafold cif, pdb and PAE json files to examples/AlphaFold
JAL-629 fix a PAEMatrix casting error
Merge branch 'develop' into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
JAL-629 make sequence id key 'seqid'
JAL-629 better test fixes. --props=... instead of --debug
Merge branch 'develop' into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
JAL-4125 Spanish translations
JAL-629 fixed a Log4j test by adding --debug arg
JAL-3416 Upgraded FlatLaf to 3.0 and added macOS theme for macOS
JAL-1988 Make sensible choices if only the opening file has been opened, and alter the message if an alignment has been fetched but not changed
JAL-4118 remove unnecessary sleep from QuitHandlerTest
JAL-629 example files from nf-core
JAL-629 adjust arg type for tempfac-shading -- was grabbing next argument
JAL-629 helper eclipse CLI run
JAL-4125 Move confirmation of closing external viewer windows into the quit handler, and allow all to close or not in closeViewer whilst quitting.
JAL-3416 Turn off (partial) flatlaf scaling for HiDPI in Linux and Java 8 - Some GUI parts unusable
Merge branch 'develop' into improvement/JAL-4111_suffixed_DEVELOP_channels
JAL-3416 remove a missed panel titlebar icon in TreePanel
JAL-3416 More explicit setting of FlatLaf macOS theme
JAL-3416 More tweaking of FlatLaf. Problem with macOS themed FlatLaf solved with new DesktopManager
|
Testless build |
| JB › GDI › #11 | 1 year ago |
Merge branch 'develop' into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
JAL-4125 Move confirmation of closing external viewer windows into the quit handler, and allow all to close or not in closeViewer whilst quitting.
Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG_MODE_for_flatlaf' into merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064
JAL-3416 Added logoIcon to quit (and potentially other) dialogs
JAL-4019 Clarification of position on 'X' in help text
JAL-4019 Put original test back
JAL-3416 make flatlaf default for linux
JAL-4125 Spanish translations
JAL-4019 Help pages for Nucleotide Ambiguity colour scheme
JAL-4064 Download JRE/JDKs from Azul if not os/arch combination not available from Adoptium
JAL-3416 Fix file permissions on bundled macOS JREs
JAL-1988 Add a sleep to file save test to give time for file to save
Merge branch 'develop' into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
JAL-4054 Altered file association templates and generated install4j xml and Info.plist snippets.
JAL-4019 small but important corrections to array order, and X colour
JAL-3416 Upgraded FlatLaf to 3.0 and added macOS theme for macOS
JAL-4118 remove unnecessary sleep from QuitHandlerTest
JAL-3416 More explicit setting of FlatLaf macOS theme
JAL-4064 re-added bundled macOS JREs as Filesets, which is the only way to get them in the DMG where we want them
JAL-3416 Remove all JFrame/JInternalFrame icons (set to null)
Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG_MODE_for_flatlaf' into merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064
JAL-4019 improvement to short sequence nucleotide detection, and some tidying of unused parameters
JAL-1988 Make sensible choices if only the opening file has been opened, and alter the message if an alignment has been fetched but not changed
JAL-4101 Updated Rfam* tests
JAL-3416 Add necessary logo to non-internal Frames
JAL-3416 Start to add JInternalFrame icons (to replace default java Duke icon in frame decoration)
JAL-3416 File Chooser iconified, JvOptionPanes iconified, other internal frames and dialogs iconified
JAL-4019 Nucleotide Ambiguity Colour Scheme added. Test for nucleotide sequence adapted to recognise nucleotide sequences with (more than 15%) ambiguity codes. Two tests fixed.
JAL-3416 More tweaking of FlatLaf. Problem with macOS themed FlatLaf solved with new DesktopManager
JAL-3416 remove a missed panel titlebar icon in TreePanel
JAL-4019 attribution to Suzanne
JAL-3416 Add necessary logo to non-internal Frames
Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG_MODE_for_flatlaf' into merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064
JAL-4064 tidying build.gradle
JAL-3416 More JInternalFrame icons
Merge branch 'merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064' into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
JAL-4125 Additions to JvOptionPane and QuitHandler with StructureViewerBase handling closed frame during quit differently. Still not working as dialog content does not appear until after quithandling thread has finished (it's blocking EDT). Need to break the doDesktopQuit Callable up into sections, that add another bit to the end when necessary.
JAL-3416 set flatlaf default drag mode to LIVE_DRAG_MODE
JAL-4101 Updated Rfam* tests
JAL-4101 Updated DEFAULT_RFAM_BASEURL
JAL-4019 Make diagnostic message debug level
JAL-4064 Cleaned up file sets in install4j template. New media installers for AARCH64 JVMs for macOS and Linux in install4j template. New variables passed to install4j by gradle.
JAL-1988 JAL-3772 Tidying of unspecified Callable declarations. Use SwingUtilities.getAncestorOfClass()
JAL-4118 fix a small buglet in BackupFiles exhibited in tests on build server. Possible problem with filename with dirs in passed to BackupFiles.
JAL-3416 No longer needed
JAL-1988 JAL-3772 Change default alignmentviewport saved status and set to true when loaded from file
JAL-4019 finalised a boolean option and tidied some comments
JAL-4064 JAL-4054 Combined install4j10 template with new architectures. Added scheme associations for macOS.
JAL-4019 Added tests for new Nucleotide sequence detection
JAL-4128 Catch RasterFormatException caused whilst resizing Overview window, recalculate OverviewDimensions od instead. Prevent negative OverviewDimensions being set to avoid problem with vertically fully shrunk overview window 'losing' the alignement canvas.
JAL-4019 small colour fix for X in the documentation
Merge branch 'bug/JAL-1988_JAL-3772_improved_quit_handling' into merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064
JAL-4101 Updated DEFAULT_RFAM_BASEURL
|
Testless build |
| Build | Completed | Code commits | Tests |
|---|---|---|---|
| JB › GGR › #7 | 1 year ago |
JAL-629 Made ArgValuesMap helper class, simplifies readability/writing of the code and will allow arg position lookups
JAL-629 Add debug messages for more failing tests
JAL-4125 Additions to JvOptionPane and QuitHandler with StructureViewerBase handling closed frame during quit differently. Still not working as dialog content does not appear until after quithandling thread has finished (it's blocking EDT). Need to break the doDesktopQuit Callable up into sections, that add another bit to the end when necessary.
JAL-4088 Updated j8libs/*.jar in THIRDPARTYLIBS
JAL-629 bootstrap args and properties. Remember index of args for 'previous structure' defaulting of other args
JAL-629 test fixing
JAL-629 refactoring TFType. Remove i18n identification of annotation.
Merge branch 'develop' into features/r2_11_2_alphafold/JAL-629
JAL-4128 Catch RasterFormatException caused whilst resizing Overview window, recalculate OverviewDimensions od instead. Prevent negative OverviewDimensions being set to avoid problem with vertically fully shrunk overview window 'losing' the alignement canvas.
JAL-1988 Add a sleep to file save test to give time for file to save
JAL-629 nf-core sample alignment files and a2m versions
JAL-629 Fasta sequence id reading whitespace fix. Flexioble pae json keys and structure. Headless fixes. Logging fixes (MessageManager -- test broken). ArgParser and Console helper methods. Commands added e.g. --colour=gecos:flower.
JAL-3416 Fix file permissions on bundled macOS JREs
JAL-629 "updated" json-simple
Merge branch 'merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064' into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
Merge branch 'develop' into features/r2_11_2_alphafold/JAL-629
JAL-3416 No longer needed
JAL-4064 JAL-4054 Corrected the tgz top-level dir from './Contents' to 'Contents' for mac JRE bundles for install4j (not strictly used, but might be in the future).
JAL-629 Attempts to add PAE to structure. --headless working. Make HTML output single threaded in headless mode. Delete an editor temp file.
JAL-4118 fix a small buglet in BackupFiles exhibited in tests on build server. Possible problem with filename with dirs in passed to BackupFiles.
JAL-629 added Alphafold cif, pdb and PAE json files to examples/AlphaFold
JAL-629 fix a PAEMatrix casting error
Merge branch 'develop' into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
JAL-629 make sequence id key 'seqid'
JAL-629 better test fixes. --props=... instead of --debug
Merge branch 'develop' into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly
JAL-4125 Spanish translations
JAL-629 fixed a Log4j test by adding --debug arg
JAL-3416 Upgraded FlatLaf to 3.0 and added macOS theme for macOS
JAL-1988 Make sensible choices if only the opening file has been opened, and alter the message if an alignment has been fetched but not changed
JAL-4118 remove unnecessary sleep from QuitHandlerTest
JAL-629 example files from nf-core
JAL-629 adjust arg type for tempfac-shading -- was grabbing next argument
JAL-629 helper eclipse CLI run
JAL-4125 Move confirmation of closing external viewer windows into the quit handler, and allow all to close or not in closeViewer whilst quitting.
JAL-3416 Turn off (partial) flatlaf scaling for HiDPI in Linux and Java 8 - Some GUI parts unusable
Merge branch 'develop' into improvement/JAL-4111_suffixed_DEVELOP_channels
JAL-3416 remove a missed panel titlebar icon in TreePanel
JAL-3416 More explicit setting of FlatLaf macOS theme
JAL-3416 More tweaking of FlatLaf. Problem with macOS themed FlatLaf solved with new DesktopManager
|
Testless build |
| Build | Completed | Code commits | Tests |
|---|---|---|---|
| JB › GDB › #644 | 12 hours ago |
JAL-3631 Some minor bugfixes to the install4j installer and word changes to match macos-install-jalview.sh
JAL-3631 Consolidated repeated code (mainly form verification). Added appdir hash routine. Wizard installer of .app bundle now deprecated, can't be used :(
JAL-3631 Extensive working of options in install4j for allowing/disabling user default appdir updates, and also allowing/disabling installation appdir updates. Appropriate guidance in tooltips and warnings when no updates will occur are given. A user-space install only allows disabling updates.
JAL-3631 Consistently and correctly enable/diable/hide elements on the additional tasks screen in the install4j installation wizard.
JAL-3631 minor changes - spelling and comment spacing in install4j template
JAL-3631 Improved tooltip on advanced options. Ensure empty box/border isn't displayed when no advanced options. Add message to clarify no Advanced options will be applied when checkbox not ticked.
JAL-3631 Correct some text to add the file separator which is being looked for too in substitutions
JAL-3631 Allow override of appDataPath with property 'setuserappdirpath' substituting %h, %u and a leading ~/
JAL-3631 Minor fixes to the advanced options scripts
JAL-3631 Made both Advanced options into a group. Changed visibility scripts to minimum required. Added a Don't setUserAppdirPath comment.
JAL-3631 Customise the user-space path in the install4j installation wizard. Not ready yet.
JAL-3631 Tweaks to getdown for updating and user appdir properties
JAL-3631 Added verbose and quiet options, and matched vmoptions with installer. Provenance of options added.
JAL-3631 Group/box and simplify visibility of advanced options on additional tasks screen in the install4j installation wizard.
JAL-3631 Comprehensive install shell script for macos
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1761 passed |