Build #20

Gradle Develop build but with stdout/sterr via --info

Build: #20 did not complete Changes by Ben Soares <b.soares@dundee.ac.uk>

Logs

The following logs have been generated by the jobs in this plan.
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Job Logs
Collapse Clover and Tests Default Stage No logs were found for this job
23-May-2023 23:32:23 Caching disabled for task ':testTask0' because:
23-May-2023 23:32:23   Build cache is disabled
23-May-2023 23:32:23 Task ':testTask0' is not up-to-date because:
23-May-2023 23:32:23   Output property 'binaryResultsDirectory' file /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1/build/test-results/testTask0/binary/output.bin has changed.
23-May-2023 23:32:23   Output property 'binaryResultsDirectory' file /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1/build/test-results/testTask0/binary/output.bin.idx has changed.
23-May-2023 23:32:23   Output property 'binaryResultsDirectory' file /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1/build/test-results/testTask0/binary/results.bin has been removed.
23-May-2023 23:32:23 Running tests WITH clover
23-May-2023 23:32:23 Starting process 'Gradle Test Executor 5'. Working directory: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1 Command: /srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Dorg.gradle.internal.worker.tmpdir=/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1/build/tmp/testTask0/work -Dorg.gradle.native=false @/srv/bamboo/home/bamboo/.gradle/.tmp/gradle-worker-classpath6278197189125762955txt -Xmx1024m -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 5'
23-May-2023 23:32:23 Successfully started process 'Gradle Test Executor 5'
23-May-2023 23:32:25 WARNING: An illegal reflective access operation has occurred
23-May-2023 23:32:25 WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
23-May-2023 23:32:25 WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
23-May-2023 23:32:25 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
23-May-2023 23:32:25 WARNING: All illegal access operations will be denied in a future release
23-May-2023 23:33:10
23-May-2023 23:33:10 Gradle suite > Gradle test > jalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMol FAILED
23-May-2023 23:33:10     java.lang.AssertionError: Didn't paste additional structureexamples/3W5V.pdb
23-May-2023 23:33:10         at org.testng.AssertJUnit.fail(AssertJUnit.java:59)
23-May-2023 23:33:10         at org.testng.AssertJUnit.assertTrue(AssertJUnit.java:24)
23-May-2023 23:33:10         at jalview.ext.jmol.JmolViewerTest.__CLR4_4_1ns5m6y3mde(JmolViewerTest.java:185)
23-May-2023 23:33:10         at jalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMol(JmolViewerTest.java:135)
25-May-2023 08:32:36 14983
25-May-2023 08:32:43 Unable to publish artifact [Clover Report (System)]: the source directory /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1/build/reports/clover does not exist.
25-May-2023 08:32:43 Unable to publish artifact [TestNG report]: the source directory /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1/build/reports/tests/test does not exist.
25-May-2023 08:32:43 Failed to execute plugin 'Clover Results Collector' with error: No file matches the specified pattern:build/reports/clover/clover.xml in [/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1]