Class | Line # | Actions | |||
---|---|---|---|---|---|
SequenceListener | 26 | 0 | 0 |
1 | /* | |
2 | * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) | |
3 | * Copyright (C) $$Year-Rel$$ The Jalview Authors | |
4 | * | |
5 | * This file is part of Jalview. | |
6 | * | |
7 | * Jalview is free software: you can redistribute it and/or | |
8 | * modify it under the terms of the GNU General Public License | |
9 | * as published by the Free Software Foundation, either version 3 | |
10 | * of the License, or (at your option) any later version. | |
11 | * | |
12 | * Jalview is distributed in the hope that it will be useful, but | |
13 | * WITHOUT ANY WARRANTY; without even the implied warranty | |
14 | * of MERCHANTABILITY or FITNESS FOR A PARTICULAR | |
15 | * PURPOSE. See the GNU General Public License for more details. | |
16 | * | |
17 | * You should have received a copy of the GNU General Public License | |
18 | * along with Jalview. If not, see <http://www.gnu.org/licenses/>. | |
19 | * The Jalview Authors are detailed in the 'AUTHORS' file. | |
20 | */ | |
21 | package jalview.structure; | |
22 | ||
23 | import jalview.datamodel.SearchResultsI; | |
24 | import jalview.datamodel.SequenceI; | |
25 | ||
26 | public interface SequenceListener | |
27 | { | |
28 | // TODO remove this? never called on SequenceListener type | |
29 | public void mouseOverSequence(SequenceI sequence, int index, int pos); | |
30 | ||
31 | /** | |
32 | * Highlights any position(s) represented by the search results and | |
33 | * (optionally) returns an informative message about the position(s) | |
34 | * higlighted | |
35 | * | |
36 | * @param results | |
37 | * @return | |
38 | */ | |
39 | public String highlightSequence(SearchResultsI results); | |
40 | ||
41 | // TODO remove this? never called | |
42 | public void updateColours(SequenceI sequence, int index); | |
43 | ||
44 | public VamsasSource getVamsasSource(); | |
45 | ||
46 | } |