Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
TextColourChooser	42	91	24	0.00%	Show methods

Class TextColourChooser

Class TextColourChooser	Line # 42	Total Statements 91	Complexity 24	TOTAL Coverage 0.00%
colourSelected(Color) : void   colourSelected(Color) : void	107107	2.02	1.01	0.0 0.00%
mousePressed(MouseEvent) : void   mousePressed(MouseEvent) : void	101101	3.03	1.01	0.0 0.00%
colourSelected(Color) : void   colourSelected(Color) : void	127127	2.02	1.01	0.0 0.00%
mousePressed(MouseEvent) : void   mousePressed(MouseEvent) : void	121121	3.03	1.01	0.0 0.00%
stateChanged(ChangeEvent) : void   stateChanged(ChangeEvent) : void	141141	1.01	1.01	0.0 0.00%
run() : void   run() : void	154154	1.01	1.01	0.0 0.00%
chooseColour(AlignmentPanel,SequenceGroup) : void   chooseColour(AlignmentPanel,SequenceGroup) : void	6767	28.028	1.01	0.0 0.00%
restoreInitialSettings() : void   restoreInitialSettings() : void	170170	12.012	2.02	0.0 0.00%
saveInitialSettings() : void   saveInitialSettings() : void	202202	15.015	4.04	0.0 0.00%
colour1Changed(Color) : void   colour1Changed(Color) : void	242242	6.06	3.03	0.0 0.00%
colour2Changed(Color) : void   colour2Changed(Color) : void	260260	6.06	3.03	0.0 0.00%
thresholdChanged(int) : void   thresholdChanged(int) : void	278278	6.06	3.03	0.0 0.00%
setGroupTextColour() : void   setGroupTextColour() : void	296296	6.06	2.02	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.gui;
22
23		import jalview.datamodel.SequenceGroup;
24		import jalview.gui.JalviewColourChooser.ColourChooserListener;
25		import jalview.util.MessageManager;
26
27		import java.awt.BorderLayout;
28		import java.awt.Color;
29		import java.awt.Dimension;
30		import java.awt.event.MouseAdapter;
31		import java.awt.event.MouseEvent;
32		import java.util.HashMap;
33		import java.util.Map;
34
35		import javax.swing.BorderFactory;
36		import javax.swing.JLabel;
37		import javax.swing.JPanel;
38		import javax.swing.JSlider;
39		import javax.swing.event.ChangeEvent;
40		import javax.swing.event.ChangeListener;
41
		0% Uncovered Elements: 124 (124) Complexity: 24 Complexity Density: 0.26
42		public class TextColourChooser
43		{
44		AlignmentPanel ap;
45
46		SequenceGroup sg;
47
48		Color original1, original2;
49
50		int originalThreshold;
51
52		Map<SequenceGroup, Color> groupColour1;
53
54		Map<SequenceGroup, Color> groupColour2;
55
56		Map<SequenceGroup, Integer> groupThreshold;
57
58		/**
59		* Show a dialogue which allows the user to select two text colours and adjust
60		* a slider for the cross-over point
61		*
62		* @param alignPanel
63		* the AlignmentPanel context
64		* @param sequenceGroup
65		* the SequenceGroup context (only for group pop-menu option)
66		*/
		0% Uncovered Elements: 28 (28) Complexity: 1 Complexity Density: 0.04
67	0	public void chooseColour(AlignmentPanel alignPanel,...
68		SequenceGroup sequenceGroup)
69		{
70	0	this.ap = alignPanel;
71	0	this.sg = sequenceGroup;
72
73	0	saveInitialSettings();
74
75	0	final JSlider slider = new JSlider(0, 750, originalThreshold);
76	0	final JPanel col1 = new JPanel();
77	0	col1.setPreferredSize(new Dimension(40, 20));
78	0	col1.setBorder(BorderFactory.createEtchedBorder());
79	0	col1.setToolTipText(MessageManager.getString("label.dark_colour"));
80	0	col1.setBackground(original1);
81	0	final JPanel col2 = new JPanel();
82	0	col2.setPreferredSize(new Dimension(40, 20));
83	0	col2.setBorder(BorderFactory.createEtchedBorder());
84	0	col2.setToolTipText(MessageManager.getString("label.light_colour"));
85	0	col2.setBackground(original2);
86	0	final JPanel bigpanel = new JPanel(new BorderLayout());
87	0	JPanel panel = new JPanel(new BorderLayout());
88	0	bigpanel.add(panel, BorderLayout.CENTER);
89	0	bigpanel.add(
90		new JLabel("<html>"
91		+ MessageManager.getString(
92		"label.select_dark_light_set_threshold")
93		+ "</html>"),
94		BorderLayout.NORTH);
95	0	panel.add(col1, BorderLayout.WEST);
96	0	panel.add(slider, BorderLayout.CENTER);
97	0	panel.add(col2, BorderLayout.EAST);
98
99	0	col1.addMouseListener(new MouseAdapter()
100		{
		0% Uncovered Elements: 3 (3) Complexity: 1 Complexity Density: 0.33
101	0	@Override...
102		public void mousePressed(MouseEvent e)
103		{
104	0	String ttl = MessageManager.getString("label.select_colour_for_text");
105	0	ColourChooserListener listener = new ColourChooserListener()
106		{
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
107	0	@Override...
108		public void colourSelected(Color c)
109		{
110	0	colour1Changed(c);
111	0	col1.setBackground(c);
112		}
113		};
114	0	JalviewColourChooser.showColourChooser(bigpanel, ttl,
115		col1.getBackground(), listener);
116		}
117		});
118
119	0	col2.addMouseListener(new MouseAdapter()
120		{
		0% Uncovered Elements: 3 (3) Complexity: 1 Complexity Density: 0.33
121	0	@Override...
122		public void mousePressed(MouseEvent e)
123		{
124	0	String ttl = MessageManager.getString("label.select_colour_for_text");
125	0	ColourChooserListener listener = new ColourChooserListener()
126		{
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
127	0	@Override...
128		public void colourSelected(Color c)
129		{
130	0	colour2Changed(c);
131	0	col2.setBackground(c);
132		}
133		};
134	0	JalviewColourChooser.showColourChooser(bigpanel, ttl,
135		col2.getBackground(), listener);
136		}
137		});
138
139	0	slider.addChangeListener(new ChangeListener()
140		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
141	0	@Override...
142		public void stateChanged(ChangeEvent evt)
143		{
144	0	thresholdChanged(slider.getValue());
145		}
146		});
147
148	0	Object[] options = new Object[] { MessageManager.getString("action.ok"),
149		MessageManager.getString("action.cancel") };
150	0	String title = MessageManager
151		.getString("label.adjust_foreground_text_colour_threshold");
152	0	Runnable action = new Runnable() // response for 1 = Cancel
153		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
154	0	@Override...
155		public void run()
156		{
157	0	restoreInitialSettings();
158		}
159		};
160	0	JvOptionPane.newOptionDialog(alignPanel).setResponseHandler(1, action)
161		.showInternalDialog(bigpanel, title,
162		JvOptionPane.YES_NO_CANCEL_OPTION,
163		JvOptionPane.PLAIN_MESSAGE, null, options,
164		MessageManager.getString("action.ok"));
165		}
166
167		/**
168		* Restore initial settings on Cancel
169		*/
		0% Uncovered Elements: 14 (14) Complexity: 2 Complexity Density: 0.17
170	0	protected void restoreInitialSettings()...
171		{
172	0	if (sg == null)
173		{
174	0	ap.av.setTextColour(original1);
175	0	ap.av.setTextColour2(original2);
176	0	ap.av.setThresholdTextColour(originalThreshold);
177		}
178		else
179		{
180	0	sg.textColour = original1;
181	0	sg.textColour2 = original2;
182	0	sg.thresholdTextColour = originalThreshold;
183		}
184
185		/*
186		* if 'Apply To All Groups' was in force, there will be
187		* group-specific settings to restore as well
188		*/
189	0	for (SequenceGroup group : this.groupColour1.keySet())
190		{
191	0	group.textColour = groupColour1.get(group);
192	0	group.textColour2 = groupColour2.get(group);
193	0	group.thresholdTextColour = groupThreshold.get(group);
194		}
195
196	0	ap.paintAlignment(false, false);
197		}
198
199		/**
200		* Save settings on entry, for restore on Cancel
201		*/
		0% Uncovered Elements: 19 (19) Complexity: 4 Complexity Density: 0.27
202	0	protected void saveInitialSettings()...
203		{
204	0	groupColour1 = new HashMap<>();
205	0	groupColour2 = new HashMap<>();
206	0	groupThreshold = new HashMap<>();
207
208	0	if (sg == null)
209		{
210		/*
211		* alignment scope
212		*/
213	0	original1 = ap.av.getTextColour();
214	0	original2 = ap.av.getTextColour2();
215	0	originalThreshold = ap.av.getThresholdTextColour();
216	0	if (ap.av.getColourAppliesToAllGroups()
217		&& ap.av.getAlignment().getGroups() != null)
218		{
219		/*
220		* if applying changes to all groups, need to be able to
221		* restore group settings as well
222		*/
223	0	for (SequenceGroup group : ap.av.getAlignment().getGroups())
224		{
225	0	groupColour1.put(group, group.textColour);
226	0	groupColour2.put(group, group.textColour2);
227	0	groupThreshold.put(group, group.thresholdTextColour);
228		}
229		}
230		}
231		else
232		{
233		/*
234		* Sequence group scope
235		*/
236	0	original1 = sg.textColour;
237	0	original2 = sg.textColour2;
238	0	originalThreshold = sg.thresholdTextColour;
239		}
240		}
241
		0% Uncovered Elements: 10 (10) Complexity: 3 Complexity Density: 0.5
242	0	void colour1Changed(Color col)...
243		{
244	0	if (sg == null)
245		{
246	0	ap.av.setTextColour(col);
247	0	if (ap.av.getColourAppliesToAllGroups())
248		{
249	0	setGroupTextColour();
250		}
251		}
252		else
253		{
254	0	sg.textColour = col;
255		}
256
257	0	ap.paintAlignment(false, false);
258		}
259
		0% Uncovered Elements: 10 (10) Complexity: 3 Complexity Density: 0.5
260	0	void colour2Changed(Color col)...
261		{
262	0	if (sg == null)
263		{
264	0	ap.av.setTextColour2(col);
265	0	if (ap.av.getColourAppliesToAllGroups())
266		{
267	0	setGroupTextColour();
268		}
269		}
270		else
271		{
272	0	sg.textColour2 = col;
273		}
274
275	0	ap.paintAlignment(false, false);
276		}
277
		0% Uncovered Elements: 10 (10) Complexity: 3 Complexity Density: 0.5
278	0	void thresholdChanged(int value)...
279		{
280	0	if (sg == null)
281		{
282	0	ap.av.setThresholdTextColour(value);
283	0	if (ap.av.getColourAppliesToAllGroups())
284		{
285	0	setGroupTextColour();
286		}
287		}
288		else
289		{
290	0	sg.thresholdTextColour = value;
291		}
292
293	0	ap.paintAlignment(false, false);
294		}
295
		0% Uncovered Elements: 8 (8) Complexity: 2 Complexity Density: 0.33
296	0	void setGroupTextColour()...
297		{
298	0	if (ap.av.getAlignment().getGroups() == null)
299		{
300	0	return;
301		}
302
303	0	for (SequenceGroup group : ap.av.getAlignment().getGroups())
304		{
305	0	group.textColour = ap.av.getTextColour();
306	0	group.textColour2 = ap.av.getTextColour2();
307	0	group.thresholdTextColour = ap.av.getThresholdTextColour();
308		}
309		}
310
311		}