Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
Residue	25	8	4	0.00%	Show methods

Class Residue

Class Residue	Line # 25	Total Statements 8	Complexity 4	TOTAL Coverage 0.00%
Residue(Vector<Atom>,int,int)   Residue(Vector<Atom>,int,int)	3333	3.03	1.01	0.0 0.00%
findAtom(String) : Atom   findAtom(String) : Atom	4040	4.04	2.02	0.0 0.00%
getAtoms() : Vector<Atom>   getAtoms() : Vector<Atom>	5353	1.01	1.01	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package mc_view;
22
23		import java.util.Vector;
24
		0% Uncovered Elements: 13 (13) Complexity: 4 Complexity Density: 0.5
25		public class Residue
26		{
27		Vector<Atom> atoms;
28
29		int number;
30
31		int count;
32
		0% Uncovered Elements: 3 (3) Complexity: 1 Complexity Density: 0.33
33	0	public Residue(Vector<Atom> resAtoms, int number, int count)...
34		{
35	0	this.atoms = resAtoms;
36	0	this.number = number;
37	0	this.count = count;
38		}
39
		0% Uncovered Elements: 6 (6) Complexity: 2 Complexity Density: 0.5
40	0	public Atom findAtom(String name)...
41		{
42	0	for (Atom atom : atoms)
43		{
44	0	if (atom.name.equals(name))
45		{
46	0	return atom;
47		}
48		}
49
50	0	return null;
51		}
52
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
53	0	public Vector<Atom> getAtoms()...
54		{
55	0	return this.atoms;
56		}
57		}