Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
AnnotationRendererFactory	30	7	6	0.00%	Show methods

Class AnnotationRendererFactory

Class AnnotationRendererFactory	Line # 30	Total Statements 7	Complexity 6	TOTAL Coverage 0.00%
getRendererFactory() : AnnotationRendererFactoryI   getRendererFactory() : AnnotationRendererFactoryI	3535	3.03	2.02	0.0 0.00%
AnnotationRendererFactory()   AnnotationRendererFactory()	4646	0.00	1.01	-1.0 -1.0 -
getRendererFor(AlignmentAnnotation) : AnnotationRowRendererI   getRendererFor(AlignmentAnnotation) : AnnotationRowRendererI	5151	4.04	3.03	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.renderer;
22
23		import jalview.datamodel.AlignmentAnnotation;
24		import jalview.renderer.api.AnnotationRendererFactoryI;
25		import jalview.renderer.api.AnnotationRowRendererI;
26		import jalview.ws.datamodel.alphafold.PAEContactMatrix;
27
28		import java.util.IdentityHashMap;
29
		0% Uncovered Elements: 16 (16) Complexity: 6 Complexity Density: 0.86
30		public class AnnotationRendererFactory implements AnnotationRendererFactoryI
31		{
32
33		private static AnnotationRendererFactoryI factory = null;
34
		0% Uncovered Elements: 5 (5) Complexity: 2 Complexity Density: 0.67
35	0	public static AnnotationRendererFactoryI getRendererFactory()...
36		{
37	0	if (factory == null)
38		{
39	0	factory = new AnnotationRendererFactory();
40		}
41	0	return factory;
42		}
43
44		IdentityHashMap<Object, AnnotationRowRendererI> renderers = new IdentityHashMap<Object, AnnotationRowRendererI>();
45
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
46	0	public AnnotationRendererFactory()...
47		{
48		// renderers.put)
49		}
50
		0% Uncovered Elements: 8 (8) Complexity: 3 Complexity Density: 0.75
51	0	@Override...
52		public AnnotationRowRendererI getRendererFor(AlignmentAnnotation row)
53		{
54	0	if (row.graph == AlignmentAnnotation.CONTACT_MAP)
55		{
56		// TODO consider configuring renderer/etc according to the type of matrix
57		// bound to the annotation row - needs to be looked up in that case
58	0	if (PAEContactMatrix.PAEMATRIX.equals(row.getCalcId()))
59		{
60	0	return ContactMapRenderer.newPAERenderer();
61		}
62		// TODO add potential for configuring renderer directly from the
63		// annotation row and/or viewmodel
64
65		}
66	0	return null;
67		}
68
69		}