Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
GAlignmentPanel	35	46	5	0.00%	Show methods

Class GAlignmentPanel

Class GAlignmentPanel	Line # 35	Total Statements 46	Complexity 5	TOTAL Coverage 0.00%
newJPanel() : JPanel   newJPanel() : JPanel	6363	3.03	1.01	0.0 0.00%
GAlignmentPanel()   GAlignmentPanel()	8989	3.03	2.02	0.0 0.00%
jbInit() : void   jbInit() : void	100100	39.039	1.01	0.0 0.00%
getIdSpaceFillerPanel1() : JPanel   getIdSpaceFillerPanel1() : JPanel	149149	1.01	1.01	0.0 0.00%

 

Contributing tests

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.jbgui;
22
23		import java.awt.BorderLayout;
24		import java.awt.Color;
25		import java.awt.Dimension;
26
27		import javax.swing.BorderFactory;
28		import javax.swing.ButtonGroup;
29		import javax.swing.JPanel;
30		import javax.swing.JScrollBar;
31		import javax.swing.JScrollPane;
32		import javax.swing.border.Border;
33
34		@SuppressWarnings("serial")
		0% Uncovered Elements: 50 (50) Complexity: 5 Complexity Density: 0.11
35		public class GAlignmentPanel extends JPanel
36		{
37		protected JScrollBar vscroll = new JScrollBar();
38
39		protected JScrollBar hscroll = new JScrollBar();
40
41		BorderLayout borderLayout1 = new BorderLayout();
42
43		BorderLayout borderLayout3 = new BorderLayout();
44
45		BorderLayout borderLayout5 = new BorderLayout();
46
47		BorderLayout borderLayout6 = new BorderLayout();
48
49		ButtonGroup buttonGroup1 = new ButtonGroup();
50
51		BorderLayout borderLayout7 = new BorderLayout();
52
53		BorderLayout borderLayout10 = new BorderLayout();
54
55		BorderLayout borderLayout11 = new BorderLayout();
56
57		public JScrollPane annotationScroller = new JScrollPane();
58
59		Border border1;
60
61		BorderLayout borderLayout4 = new BorderLayout();
62
		0% Uncovered Elements: 3 (3) Complexity: 1 Complexity Density: 0.33
63	0	static JPanel newJPanel()...
64		{ // BH 2019
65	0	JPanel p = new JPanel();
66		// leaving this in, as it prevents
67		// the checkerboard business, despite how
68		// funky that looks. Remove if you want to.
69	0	p.setBackground(Color.white);
70	0	return p;
71		}
72
73		protected JPanel sequenceHolderPanel = newJPanel();
74
75		protected JPanel seqPanelHolder = newJPanel();
76
77		protected JPanel scalePanelHolder = newJPanel();
78
79		public JPanel idPanelHolder = newJPanel();
80
81		protected JPanel idSpaceFillerPanel1 = newJPanel();
82
83		public JPanel annotationSpaceFillerHolder = newJPanel();
84
85		protected JPanel hscrollFillerPanel = newJPanel();
86
87		JPanel hscrollHolder = newJPanel();
88
		0% Uncovered Elements: 3 (3) Complexity: 2 Complexity Density: 0.67
89	0	public GAlignmentPanel()...
90		{
91	0	try
92		{
93	0	jbInit();
94		} catch (Exception e)
95		{
96	0	e.printStackTrace();
97		}
98		}
99
		0% Uncovered Elements: 39 (39) Complexity: 1 Complexity Density: 0.03
100	0	private void jbInit() throws Exception...
101		{
102		// annotationScroller.setBackground(Color.white); // BH 2019
103
104	0	border1 = BorderFactory.createLineBorder(Color.gray, 1);
105	0	idPanelHolder.setBorder(null);
106	0	idPanelHolder.setPreferredSize(new Dimension(70, 10));
107	0	this.setLayout(borderLayout7);
108	0	sequenceHolderPanel
109		.setMaximumSize(new Dimension(2147483647, 2147483647));
110	0	sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));
111	0	sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));
112	0	sequenceHolderPanel.setLayout(borderLayout3);
113	0	seqPanelHolder.setLayout(borderLayout1);
114	0	scalePanelHolder.setBackground(Color.white);
115	0	scalePanelHolder.setMinimumSize(new Dimension(10, 80));
116	0	scalePanelHolder.setPreferredSize(new Dimension(10, 30));
117	0	scalePanelHolder.setLayout(borderLayout6);
118	0	idPanelHolder.setLayout(borderLayout5);
119	0	idSpaceFillerPanel1.setBackground(Color.white);
120	0	idSpaceFillerPanel1.setPreferredSize(new Dimension(10, 30));
121	0	idSpaceFillerPanel1.setLayout(borderLayout11);
122	0	annotationSpaceFillerHolder.setBackground(Color.white);
123	0	annotationSpaceFillerHolder.setPreferredSize(new Dimension(10, 80));
124	0	annotationSpaceFillerHolder.setLayout(borderLayout4);
125	0	hscroll.setOrientation(JScrollBar.HORIZONTAL);
126	0	hscrollHolder.setLayout(borderLayout10);
127	0	hscrollFillerPanel.setBackground(Color.white);
128	0	hscrollFillerPanel.setPreferredSize(new Dimension(70, 10));
129	0	hscrollHolder.setBackground(Color.white);
130	0	annotationScroller.setBorder(null);
131	0	annotationScroller.setPreferredSize(new Dimension(10, 80));
132	0	this.setPreferredSize(new Dimension(220, 166));
133
134	0	sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);
135	0	sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);
136	0	seqPanelHolder.add(vscroll, BorderLayout.EAST);
137	0	sequenceHolderPanel.add(annotationScroller, BorderLayout.SOUTH);
138
139		// jPanel3.add(secondaryPanelHolder, BorderLayout.SOUTH);
140	0	this.add(idPanelHolder, BorderLayout.WEST);
141	0	idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);
142	0	idPanelHolder.add(annotationSpaceFillerHolder, BorderLayout.SOUTH);
143	0	this.add(hscrollHolder, BorderLayout.SOUTH);
144	0	hscrollHolder.add(hscroll, BorderLayout.CENTER);
145	0	hscrollHolder.add(hscrollFillerPanel, BorderLayout.WEST);
146	0	this.add(sequenceHolderPanel, BorderLayout.CENTER);
147		}
148
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
149	0	public JPanel getIdSpaceFillerPanel1()...
150		{
151	0	return idSpaceFillerPanel1;
152		}
153		}