Build #2

Build: #2 failed

Job: Clover and Tests failed

Stages & jobs

  1. Default Stage

Job result summary

Completed
Duration
11 minutes
Agent
Default Agent
Revision
377f1f52a15db66fd5768669a50bfda03250a6c7 377f1f52a15db66fd5768669a50bfda03250a6c7
Total tests
1899
Fixed in
#3 (Manual run by James Procter)

Tests

  • 1,899 tests in total
  • 1 test failed
  • 1 failure is new
  • 5 tests were fixed
  • 7 minutes taken in total.
New test failures 1
Status Test Duration
Collapse Failed CommandLineOperationsNG testHeadlessModeOutputToStdout(./test/jalview/bin/argparser/testfiles/test1.fa ./test/jalview/bin/argparser/testfiles/test2.fa ./test/jalview/bin/argparser/testfiles/test3.fa --all --output -, test/jalview/bin/test1-3.fa, 13000) History
3 secs
Classname: java.lang.AssertionError
Message: STDOUT from jalview command did not match the comparison file expected [>TEST1/1-4
AAAA
>TEST2/1-4
LLLL
>TEST3/1-5
AAARG
] but found [>TEST1/1-4
(63 more lines...)
Fixed tests 5
Status Test Failing since Duration
Successful HiDPISettingTest2 testHiDPISettings(1) History
2 secs
Successful HiDPISettingTest2 testHiDPISettings(10) History
2 secs
Successful HiDPISettingTest2 testHiDPISettings(2) History
2 secs
Successful HiDPISettingTest2 testHiDPISettings(4) History
2 secs
Successful Log4jTest testLog4j History
1 sec

Error summary

The build generated some errors. See the full build log for more details.

WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB724-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB724-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release

62 tests completed, 1 failed
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB724-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release

FAILURE: Build failed with an exception.

* Where:
Build file '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB724-JOB1/build.gradle' line: 1967

* What went wrong:
Failed tests!

* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
> Run with --scan to get full insights.

* Get more help at https://help.gradle.org

BUILD FAILED in 9m 51s