Coverage Report
File FeaturesDisplayed.java
Coverage histogram
21% of files have more coverage
Classes
| Class | Line # | Actions | |||
|---|---|---|---|---|---|
| FeaturesDisplayed | 30 | 19 | 13 |
Contributing tests
This file is covered by 30 tests.
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Source view
| 1 | /* | |
| 2 | * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) | |
| 3 | * Copyright (C) $$Year-Rel$$ The Jalview Authors | |
| 4 | * | |
| 5 | * This file is part of Jalview. | |
| 6 | * | |
| 7 | * Jalview is free software: you can redistribute it and/or | |
| 8 | * modify it under the terms of the GNU General Public License | |
| 9 | * as published by the Free Software Foundation, either version 3 | |
| 10 | * of the License, or (at your option) any later version. | |
| 11 | * | |
| 12 | * Jalview is distributed in the hope that it will be useful, but | |
| 13 | * WITHOUT ANY WARRANTY; without even the implied warranty | |
| 14 | * of MERCHANTABILITY or FITNESS FOR A PARTICULAR | |
| 15 | * PURPOSE. See the GNU General Public License for more details. | |
| 16 | * | |
| 17 | * You should have received a copy of the GNU General Public License | |
| 18 | * along with Jalview. If not, see <http://www.gnu.org/licenses/>. | |
| 19 | * The Jalview Authors are detailed in the 'AUTHORS' file. | |
| 20 | */ | |
| 21 | package jalview.viewmodel.seqfeatures; | |
| 22 | ||
| 23 | import jalview.api.FeaturesDisplayedI; | |
| 24 | ||
| 25 | import java.util.Collection; | |
| 26 | import java.util.Collections; | |
| 27 | import java.util.HashSet; | |
| 28 | import java.util.Set; | |
| 29 | ||
| 30 | public class FeaturesDisplayed implements FeaturesDisplayedI | |
| 31 | { | |
| 32 | private Set<String> featuresDisplayed = new HashSet<>(); | |
| 33 | ||
| 34 | private Set<String> featuresRegistered = new HashSet<>(); | |
| 35 | ||
| 36 | 0 |  public FeaturesDisplayed(FeaturesDisplayedI featuresDisplayed2) |
| 37 | { | |
| 38 | 0 | Set<String> fdisp = featuresDisplayed2.getVisibleFeatures(); |
| 39 | 0 | for (String ftype : fdisp) |
| 40 | { | |
| 41 | 0 | featuresDisplayed.add(ftype); |
| 42 | 0 | featuresRegistered.add(ftype); |
| 43 | } | |
| 44 | } | |
| 45 | ||
| 46 | 28 | public FeaturesDisplayed() |
| 47 | { | |
| 48 | } | |
| 49 | ||
| 50 | 13 | @Override |
| 51 | public Set<String> getVisibleFeatures() | |
| 52 | { | |
| 53 | 13 | return Collections.unmodifiableSet(featuresDisplayed); |
| 54 | } | |
| 55 | ||
| 56 | 142 | @Override |
| 57 | public boolean isVisible(String featureType) | |
| 58 | { | |
| 59 | 142 | return featuresDisplayed.contains(featureType); |
| 60 | } | |
| 61 | ||
| 62 | 0 | @Override |
| 63 | public boolean areVisible(Collection<String> featureTypes) | |
| 64 | { | |
| 65 | 0 | return featuresDisplayed.containsAll(featureTypes); |
| 66 | } | |
| 67 | ||
| 68 | 11 | @Override |
| 69 | public void clear() | |
| 70 | { | |
| 71 | 11 | featuresDisplayed.clear(); |
| 72 | 11 | featuresRegistered.clear(); |
| 73 | } | |
| 74 | ||
| 75 | 0 | @Override |
| 76 | public void setAllVisible(Collection<String> makeVisible) | |
| 77 | { | |
| 78 | 0 | featuresDisplayed.addAll(makeVisible); |
| 79 | 0 | featuresRegistered.addAll(makeVisible); |
| 80 | } | |
| 81 | ||
| 82 | 0 | @Override |
| 83 | public void setAllRegisteredVisible() | |
| 84 | { | |
| 85 | 0 | featuresDisplayed.addAll(featuresRegistered); |
| 86 | } | |
| 87 | ||
| 88 | 101 | @Override |
| 89 | public void setVisible(String featureType) | |
| 90 | { | |
| 91 | 101 | featuresDisplayed.add(featureType); |
| 92 | 101 | featuresRegistered.add(featureType); |
| 93 | } | |
| 94 | ||
| 95 | 14 | @Override |
| 96 | public void setHidden(String featureType) | |
| 97 | { | |
| 98 | 14 | featuresDisplayed.remove(featureType); |
| 99 | 14 | featuresRegistered.add(featureType); |
| 100 | } | |
| 101 | ||
| 102 | 1 | @Override |
| 103 | public boolean isRegistered(String type) | |
| 104 | { | |
| 105 | 1 | return featuresRegistered.contains(type); |
| 106 | } | |
| 107 | ||
| 108 | 38 | @Override |
| 109 | public int getVisibleFeatureCount() | |
| 110 | { | |
| 111 | 38 | return featuresDisplayed.size(); |
| 112 | } | |
| 113 | ||
| 114 | 13 | @Override |
| 115 | public int getRegisteredFeaturesCount() | |
| 116 | { | |
| 117 | 13 | return featuresRegistered.size(); |
| 118 | } | |
| 119 | } |