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Coverage Report

  1. Project Clover database Wed Nov 13 2024 16:12:26 GMT
  2. Package jalview.io.gff

File SequenceOntologyFactory.java

 

Coverage histogram

../../../img/srcFileCovDistChart8.png
21% of files have more coverage

Code metrics

2
4
2
1
48
17
3
0.75
2
2
1.5

Classes

Class Line # Actions
SequenceOntologyFactory 31 4 3
0.7575%
 

Contributing tests

This file is covered by 97 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package jalview.io.gff;
22   
23    /**
24    * A factory class that returns a model of the Sequence Ontology. By default a
25    * hard-coded subset is used (for the applet, or testing), or setInstance() can
26    * be used to set full Ontology data.
27    *
28    * @author gmcarstairs
29    *
30    */
 
31    public class SequenceOntologyFactory
32    {
33    private static SequenceOntologyI instance;
34   
 
35  153 toggle public static synchronized SequenceOntologyI getInstance()
36    {
37  153 if (instance == null)
38    {
39  0 instance = new SequenceOntologyLite();
40    }
41  153 return instance;
42    }
43   
 
44  140 toggle public static void setInstance(SequenceOntologyI so)
45    {
46  140 instance = so;
47    }
48    }